RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 CYB5D2Q8WUJ1 264 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 TSSK6Q9BXA6 273 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 TM9SF3Q9HD45 589 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 XPNPEP1Q9NQW7 623 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 LAMP5Q9UJQ1 280 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 SCML2Q9UQR0 700 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 IFT52Q9Y366 437 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 PCDHB14Q9Y5E9 798 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 C13orf42A0A1B0GVH6 325 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 KDELR3O43731 214 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 PRKCZQ05513 592 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 TMEM198Q66K66 360 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 SHKBP1Q8TBC3 707 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 KCNN1Q92952 543 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 LRRC42Q9Y546 428 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 CDH10Q9Y6N8 788 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 ATRNL1Q5VV63 1379 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 ZNF541Q9H0D2 1346 aa11.19□□□□□ -0.62
VCL-202ENST00000372755 CDRT1O95170 752 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 TBX18O95935 607 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 PIGRP01833 764 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 PCBP2Q15366 365 aaKnown RBP eCLIP11.18□□□□□ -0.621e-6■□□□□ 11.2
VCL-202ENST00000372755 ZNF517Q6ZMY9 492 aaPredicted RBP11.18□□□□□ -0.62
VCL-202ENST00000372755 TUBA1CQ9BQE3 449 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 OSBPL7Q9BZF2 842 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 EBF2Q9HAK2 575 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 SIX2Q9NPC8 291 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 GKN1Q9NS71 199 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 FBXL12Q9NXK8 326 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 ACTR3BQ9P1U1 418 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 MGAT4BQ9UQ53 548 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 RIMS1Q86UR5 1692 aaKnown RBP11.18□□□□□ -0.62
VCL-202ENST00000372755 LOC730098B7Z3J9 87 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 M0QX08 132 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 EIF1AYO14602 144 aaKnown RBP11.18□□□□□ -0.62
VCL-202ENST00000372755 ITM2AO43736 263 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 MTX2O75431 263 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 PRLP01236 227 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 FOXN2P32314 431 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 EIF1AXP47813 144 aaKnown RBP11.18□□□□□ -0.62
VCL-202ENST00000372755 SLC18A1P54219 525 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 WDR45BQ5MNZ6 344 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 TMIGD1Q6UXZ0 262 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 SNX29P2Q8IUI4 249 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 DCUN1D3Q8IWE4 304 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 SLC37A3Q8NCC5 494 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 SLCO2A1Q92959 643 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 TRIM43Q96BQ3 446 aaPredicted RBP11.18□□□□□ -0.62
VCL-202ENST00000372755 SMOC2Q9H3U7 446 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 SLC7A8Q9UHI5 535 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 SPATA31D1Q6ZQQ2 1576 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 M0R129 80 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 E2F3O00716 465 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 INMTO95050 263 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 ADH1BP00325 375 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 RAB30Q15771 203 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 TMEM110Q86TL2 294 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 ZNF709Q8N972 641 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 AURKBQ96GD4 344 aaPredicted RBP11.18□□□□□ -0.62
VCL-202ENST00000372755 CCSER2Q9H7U1 834 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 MRM3Q9HC36 420 aaKnown RBP11.18□□□□□ -0.62
VCL-202ENST00000372755 ASB6Q9NWX5 421 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 CLDND1Q9NY35 253 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 HS3ST4Q9Y661 456 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 TLX2O43763 284 aaPredicted RBP11.18□□□□□ -0.62
VCL-202ENST00000372755 SLC19A2O60779 497 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 CREG1O75629 220 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 IL33O95760 270 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 GSK3BP49841 420 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 DGKQP52824 942 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 E2F1Q01094 437 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 RIPPLY1Q0D2K3 151 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 DNASE1L3Q13609 305 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 ALG10BQ5I7T1 473 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 OR4E2Q8NGC2 313 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 SEC14L1Q92503 715 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 OR51I1Q9H343 314 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 TPT1P8Q9HAU6 139 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 MAFFQ9ULX9 164 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 PLCL2Q9UPR0 1127 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 BLOC1S5-TXNDC5H3BN57 136 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 ARVCFO00192 962 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 CLDN7O95471 211 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 PDYNP01213 254 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 FESP07332 822 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 TRAM2Q15035 370 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 Q6ZVU0 165 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 LMX1AQ8TE12 382 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 EZH1Q92800 747 aaPredicted RBP11.18□□□□□ -0.62
VCL-202ENST00000372755 OR10A4Q9H209 315 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 PIGVQ9NUD9 493 aa11.18□□□□□ -0.62
VCL-202ENST00000372755 ANKRD66B4E2M5 251 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 B4GALT2O60909 372 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 OAZ2O95190 189 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 PET100P0DJ07 73 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 ZNF16P17020 682 aaPredicted RBP11.17□□□□□ -0.62
VCL-202ENST00000372755 CKMT2P17540 419 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 CLRN1P58418 232 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 KCNJ11Q14654 390 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 SYCE2Q6PIF2 218 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms