RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 LINC00471Q8N535 108 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 AMER2Q8N7J2 671 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 ANKFN1Q8N957 763 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 KBTBD8Q8NFY9 601 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 VN1R2Q8NFZ6 395 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 OR56A1Q8NGH5 318 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 HUS1BQ8NHY5 278 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 WFDC5Q8TCV5 224 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 TRIM43Q96BQ3 446 aaPredicted RBP5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 MOAP1Q96BY2 351 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 PKP4Q99569 1192 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 GPATCH1Q9BRR8 931 aaKnown RBP5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 SLC17A9Q9BYT1 436 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 BHLHE41Q9C0J9 482 aaPredicted RBP5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 PITHD1Q9GZP4 211 aaPredicted RBP5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 MAGIXQ9H6Y5 334 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 PELI2Q9HAT8 420 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 TM9SF3Q9HD45 589 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 SLC2A4RGQ9NR83 387 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 ARMC1Q9NVT9 282 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 TAS2R9Q9NYW1 312 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 MARK1Q9P0L2 795 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 AKAP7Q9P0M2 348 aaPredicted RBP5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 PRKAB1Q9Y478 270 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 GMEB1Q9Y692 573 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 PRSS21Q9Y6M0 314 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 SHROOM3Q8TF72 1996 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 A0A0G2JMZ2 1700 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 A0A0U1RQS6 177 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 H0YAE9 185 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 PLK4O00444 970 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 NME4O00746 187 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 MAN2B1O00754 1011 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 NDUFS4O43181 175 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 PRAMEF12O95522 483 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 CD247P20963 164 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 NT5EP21589 574 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 DRD1P21728 446 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 RGS8P57771 180 aaPredicted RBP5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 TRAF3Q13114 568 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 GRIN2CQ14957 1233 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 ZNF77Q15935 545 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 VMACQ2NL98 169 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 C18orf21Q32NC0 220 aaPredicted RBP5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 FAM78AQ5JUQ0 283 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 TYW3Q6IPR3 259 aaKnown RBP5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 PPP4R4Q6NUP7 873 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 ZNF544Q6NX49 715 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 PLEKHM3Q6ZWE6 761 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 GALNT5Q7Z7M9 940 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 FAM129CQ86XR2 697 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 MFSD6LQ8IWD5 586 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 PEX5LQ8IYB4 626 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 KRTCAP2Q8N6L1 136 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 KIAA1958Q8N8K9 716 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 OR5P2Q8WZ92 322 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 NODALQ96S42 347 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 SLC38A3Q99624 504 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 BRINP2Q9C0B6 783 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 P2RY12Q9H244 342 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 MTG2Q9H4K7 406 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 EQTNQ9NQ60 294 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 SMOXQ9NWM0 555 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 LYARQ9NX58 379 aaKnown RBP5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 WBP1LQ9NX94 342 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 TUBA8Q9NY65 449 aaPredicted RBP5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 TESMINQ9Y4I5 508 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 SCN10AQ9Y5Y9 1956 aa5.13□□□□□ -1.59
SMNDC1-202ENST00000369603 ARHGEF33A8MVX0 844 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 WASH3PC4AMC7 463 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 H3BNH8 94 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 H7BY64 318 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 PDLIM1O00151 329 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 RGS5O15539 181 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 NOBOXO60393 691 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 MED26O95402 600 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 HPRP00739 348 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 C9P02748 559 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 TSPAN19P0C672 248 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 BMP2P12643 396 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 LAMP2P13473 410 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 UQCRC2P22695 453 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 PRDX3P30048 256 aaKnown RBP5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 CPOXP36551 454 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 MAGEA10P43363 369 aaPredicted RBP5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 ENTPD1P49961 510 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 RAB28P51157 221 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 PTSQ03393 145 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 EIPR1Q53HC9 387 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 TNFAIP8L2Q6P589 184 aaPredicted RBP5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 TRAF7Q6Q0C0 670 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 MAVSQ7Z434 540 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 PDZD3Q86UT5 571 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 MARVELD2Q8N4S9 558 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 DPP10Q8N608 796 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 ZBTB8BQ8NAP8 495 aaPredicted RBP5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 OR2L2Q8NH16 312 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 VANGL1Q8TAA9 524 aaPredicted RBP5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 NR4A3Q92570 626 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 SLC9A6Q92581 669 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms