RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 NAA20P61599 178 aa9.57□□□□□ -0.88
TPM3-210ENST00000368530 UBE2IP63279 158 aaKnown RBP9.57□□□□□ -0.88
TPM3-210ENST00000368530 GRB7Q14451 532 aa9.57□□□□□ -0.88
TPM3-210ENST00000368530 LETMD1Q6P1Q0 360 aa9.57□□□□□ -0.88
TPM3-210ENST00000368530 CYB5D1Q6P9G0 228 aa9.57□□□□□ -0.88
TPM3-210ENST00000368530 SNX32Q86XE0 403 aa9.57□□□□□ -0.88
TPM3-210ENST00000368530 CFAP206Q8IYR0 622 aa9.57□□□□□ -0.88
TPM3-210ENST00000368530 OR4F6Q8NGB9 312 aa9.57□□□□□ -0.88
TPM3-210ENST00000368530 UBTD2Q8WUN7 234 aa9.57□□□□□ -0.88
TPM3-210ENST00000368530 STON2Q8WXE9 905 aa9.57□□□□□ -0.88
TPM3-210ENST00000368530 MCUR1Q96AQ8 359 aa9.57□□□□□ -0.88
TPM3-210ENST00000368530 KIAA1143Q96AT1 154 aaPredicted RBP9.57□□□□□ -0.88
TPM3-210ENST00000368530 TUBGCP3Q96CW5 907 aa9.57□□□□□ -0.88
TPM3-210ENST00000368530 HIST1H2AHQ96KK5 128 aa9.57□□□□□ -0.88
TPM3-210ENST00000368530 HIST1H2AJQ99878 128 aa9.57□□□□□ -0.88
TPM3-210ENST00000368530 H2AFJQ9BTM1 129 aa9.57□□□□□ -0.88
TPM3-210ENST00000368530 EFHD1Q9BUP0 239 aa9.57□□□□□ -0.88
TPM3-210ENST00000368530 TRIT1Q9H3H1 467 aaKnown RBP9.57□□□□□ -0.88
TPM3-210ENST00000368530 ZNF385DQ9H6B1 395 aa9.57□□□□□ -0.88
TPM3-210ENST00000368530 PRDM8Q9NQV8 689 aa9.57□□□□□ -0.88
TPM3-210ENST00000368530 CPNE7Q9UBL6 633 aa9.57□□□□□ -0.88
TPM3-210ENST00000368530 KCNK6Q9Y257 313 aa9.57□□□□□ -0.88
TPM3-210ENST00000368530 KIR2DS5A0A0G2JLQ3 304 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 A0A0G2JNG1 304 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 SLC5A10A0PJK1 596 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 LILRA5A6NI73 299 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 ARHGEF33A8MVX0 844 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 K7EPI3 171 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 KIR2DS3K7RE56 304 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 FFAR3O14843 346 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 SLC16A5O15375 505 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 GSC2O15499 205 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 GPR42O15529 346 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 STK16O75716 305 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 POP7O75817 140 aaKnown RBP9.56□□□□□ -0.88
TPM3-210ENST00000368530 RASSF9O75901 435 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 WDR47O94967 919 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 OTCP00480 354 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 CAPN1P07384 714 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 ENO2P09104 434 aaPredicted RBP9.56□□□□□ -0.88
TPM3-210ENST00000368530 ACP5P13686 325 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 EZRP15311 586 aaKnown RBP9.56□□□□□ -0.88
TPM3-210ENST00000368530 TCN2P20062 427 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 PIK3CGP48736 1102 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 HTR6P50406 440 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 GFERP55789 205 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 NME5P56597 212 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 SLC25A3Q00325 362 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 SP140Q13342 867 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 KIR2DS5Q14953 304 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 BCL7AQ4VC05 210 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.56□□□□□ -0.88
TPM3-210ENST00000368530 GK5Q6ZS86 529 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 NEK10Q6ZWH5 1172 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 MILR1Q7Z6M3 343 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 SLC9B2Q86UD5 537 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 MYLK4Q86YV6 388 aaPredicted RBP9.56□□□□□ -0.88
TPM3-210ENST00000368530 CPSF7Q8N684 471 aaKnown RBP9.56□□□□□ -0.88
TPM3-210ENST00000368530 METTL6Q8TCB7 284 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 MCOLN3Q8TDD5 553 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 SH3KBP1Q96B97 665 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 PYCR2Q96C36 320 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 CMTM5Q96DZ9 223 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 ATG10Q9H0Y0 220 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 RMI1Q9H9A7 625 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 UCK1Q9HA47 277 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 ZNF624Q9P2J8 865 aaPredicted RBP9.56□□□□□ -0.88
TPM3-210ENST00000368530 SLC23A2Q9UGH3 650 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 KLHL3Q9UH77 587 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 POLG2Q9UHN1 485 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 TP53TG5Q9Y2B4 290 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 OR5K4A6NMS3 321 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 GFYI3L273 518 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 AIM2O14862 343 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 CHUKO15111 745 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 VEGFDO43915 354 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 PEX11AO75192 247 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 NTRK1P04629 796 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 GSTM1P09488 218 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 ALDOCP09972 364 aaKnown RBP9.56□□□□□ -0.88
TPM3-210ENST00000368530 XRCC1P18887 633 aaPredicted RBP9.56□□□□□ -0.88
TPM3-210ENST00000368530 PRDX6P30041 224 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 HMOX2P30519 316 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 PGM1P36871 562 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 SLC19A1P41440 591 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 MC1RQ01726 317 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 GSTM4Q03013 218 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 TRAF3Q13114 568 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 NFE2L1Q14494 772 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 SQLEQ14534 574 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 CCSMST1Q4G0I0 132 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 AGKQ53H12 422 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 SGO1Q5FBB7 561 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 TCTN3Q6NUS6 607 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 FAM83HQ6ZRV2 1179 aaPredicted RBP9.56□□□□□ -0.88
TPM3-210ENST00000368530 CHSY3Q70JA7 882 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 LARP4Q71RC2 724 aaKnown RBP eCLIP9.56□□□□□ -0.88
TPM3-210ENST00000368530 PLXDC1Q8IUK5 500 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 ZNF547Q8IVP9 402 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 SLC22A15Q8IZD6 547 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms