RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 PTPN2P17706 415 aa17.41■□□□□ 0.38
UBQLN4-201ENST00000368309 TIA1P31483 386 aaKnown RBP eCLIP17.41■□□□□ 0.38
UBQLN4-201ENST00000368309 MMP12P39900 470 aa17.41■□□□□ 0.38
UBQLN4-201ENST00000368309 NPRL3Q12980 569 aa17.41■□□□□ 0.38
UBQLN4-201ENST00000368309 DMC1Q14565 340 aa17.41■□□□□ 0.38
UBQLN4-201ENST00000368309 MAD2L1BPQ15013 274 aaPredicted RBP17.41■□□□□ 0.38
UBQLN4-201ENST00000368309 CIDECQ96AQ7 238 aaPredicted RBP17.41■□□□□ 0.38
UBQLN4-201ENST00000368309 KCNC2Q96PR1 638 aa17.41■□□□□ 0.38
UBQLN4-201ENST00000368309 CHST8Q9H2A9 424 aa17.41■□□□□ 0.38
UBQLN4-201ENST00000368309 ACSL6Q9UKU0 697 aa17.41■□□□□ 0.38
UBQLN4-201ENST00000368309 TMEM229AB2RXF0 380 aa17.4■□□□□ 0.38
UBQLN4-201ENST00000368309 PCDHGA12O60330 932 aa17.4■□□□□ 0.38
UBQLN4-201ENST00000368309 C1orf105O95561 183 aa17.4■□□□□ 0.38
UBQLN4-201ENST00000368309 HPCAL1P37235 193 aa17.4■□□□□ 0.38
UBQLN4-201ENST00000368309 ITGA1P56199 1179 aa17.4■□□□□ 0.38
UBQLN4-201ENST00000368309 VBP1P61758 197 aa17.4■□□□□ 0.38
UBQLN4-201ENST00000368309 ARMCX6Q7L4S7 300 aa17.4■□□□□ 0.38
UBQLN4-201ENST00000368309 VN1R2Q8NFZ6 395 aa17.4■□□□□ 0.38
UBQLN4-201ENST00000368309 AMBNQ9NP70 447 aa17.4■□□□□ 0.38
UBQLN4-201ENST00000368309 ADPRHL2Q9NX46 363 aa17.4■□□□□ 0.38
UBQLN4-201ENST00000368309 BTNL2Q9UIR0 455 aa17.4■□□□□ 0.38
UBQLN4-201ENST00000368309 VIPP01282 170 aa17.4■□□□□ 0.38
UBQLN4-201ENST00000368309 ZNF8P17098 575 aaPredicted RBP17.4■□□□□ 0.38
UBQLN4-201ENST00000368309 ZNF33BQ06732 778 aa17.4■□□□□ 0.38
UBQLN4-201ENST00000368309 SLBPQ14493 270 aaKnown RBP eCLIP17.4■□□□□ 0.38
UBQLN4-201ENST00000368309 ADPRMQ3LIE5 342 aa17.4■□□□□ 0.38
UBQLN4-201ENST00000368309 ARHGAP15Q53QZ3 475 aa17.4■□□□□ 0.38
UBQLN4-201ENST00000368309 TSPYL5Q86VY4 417 aaPredicted RBP17.4■□□□□ 0.38
UBQLN4-201ENST00000368309 OR5AK3PQ8NH89 298 aa17.4■□□□□ 0.38
UBQLN4-201ENST00000368309 NDNFQ8TB73 568 aa17.4■□□□□ 0.38
UBQLN4-201ENST00000368309 COQ8BQ96D53 544 aa17.4■□□□□ 0.38
UBQLN4-201ENST00000368309 QSOX1O00391 747 aa17.4■□□□□ 0.38
UBQLN4-201ENST00000368309 C6orf47O95873 294 aa17.4■□□□□ 0.38
UBQLN4-201ENST00000368309 HSD3B1P14060 373 aa17.4■□□□□ 0.38
UBQLN4-201ENST00000368309 HSD3B2P26439 372 aa17.4■□□□□ 0.38
UBQLN4-201ENST00000368309 CAMK2GQ13555 558 aaPredicted RBP17.4■□□□□ 0.38
UBQLN4-201ENST00000368309 ZNF77Q15935 545 aa17.4■□□□□ 0.38
UBQLN4-201ENST00000368309 SPIN4Q56A73 249 aa17.4■□□□□ 0.38
UBQLN4-201ENST00000368309 ANXA8L1Q5VT79 327 aa17.4■□□□□ 0.38
UBQLN4-201ENST00000368309 AHSA2Q719I0 299 aa17.4■□□□□ 0.38
UBQLN4-201ENST00000368309 TSEN54Q7Z6J9 526 aaKnown RBP17.4■□□□□ 0.38
UBQLN4-201ENST00000368309 ZNF740Q8NDX6 193 aa17.4■□□□□ 0.38
UBQLN4-201ENST00000368309 WDR48Q8TAF3 677 aa17.4■□□□□ 0.38
UBQLN4-201ENST00000368309 LMCD1Q9NZU5 365 aa17.4■□□□□ 0.38
UBQLN4-201ENST00000368309 DOLKQ9UPQ8 538 aa17.4■□□□□ 0.38
UBQLN4-201ENST00000368309 ZNF197O14709 1029 aa17.39■□□□□ 0.37
UBQLN4-201ENST00000368309 C9P02748 559 aa17.39■□□□□ 0.37
UBQLN4-201ENST00000368309 JUNDP17535 347 aa17.39■□□□□ 0.37
UBQLN4-201ENST00000368309 KRT20P35900 424 aa17.39■□□□□ 0.37
UBQLN4-201ENST00000368309 ERAP2Q6P179 960 aa17.39■□□□□ 0.37
UBQLN4-201ENST00000368309 DCDC5Q6ZRR9 648 aa17.39■□□□□ 0.37
UBQLN4-201ENST00000368309 COMMD6Q7Z4G1 85 aa17.39■□□□□ 0.37
UBQLN4-201ENST00000368309 SLCO6A1Q86UG4 719 aa17.39■□□□□ 0.37
UBQLN4-201ENST00000368309 GPR65Q8IYL9 337 aa17.39■□□□□ 0.37
UBQLN4-201ENST00000368309 TMCO5AQ8N6Q1 288 aa17.39■□□□□ 0.37
UBQLN4-201ENST00000368309 C11orf65Q8NCR3 313 aa17.39■□□□□ 0.37
UBQLN4-201ENST00000368309 TRUB1Q8WWH5 349 aaKnown RBP17.39■□□□□ 0.37
UBQLN4-201ENST00000368309 LRRC3BQ96PB8 259 aa17.39■□□□□ 0.37
UBQLN4-201ENST00000368309 SPNS1Q9H2V7 528 aa17.39■□□□□ 0.37
UBQLN4-201ENST00000368309 SPASTQ9UBP0 616 aa17.39■□□□□ 0.37
UBQLN4-201ENST00000368309 PCDHGB1Q9Y5G3 927 aa17.39■□□□□ 0.37
UBQLN4-201ENST00000368309 UNC80Q8N2C7 3258 aa17.39■□□□□ 0.37
UBQLN4-201ENST00000368309 HLA-EP13747 358 aa17.39■□□□□ 0.37
UBQLN4-201ENST00000368309 C21orf58P58505 322 aa17.39■□□□□ 0.37
UBQLN4-201ENST00000368309 CLCA4Q14CN2 919 aa17.39■□□□□ 0.37
UBQLN4-201ENST00000368309 TCEAL5Q5H9L2 206 aa17.39■□□□□ 0.37
UBQLN4-201ENST00000368309 TRMT11Q7Z4G4 463 aaKnown RBP17.39■□□□□ 0.37
UBQLN4-201ENST00000368309 FAM124AQ86V42 546 aa17.39■□□□□ 0.37
UBQLN4-201ENST00000368309 CENPSQ8N2Z9 138 aa17.39■□□□□ 0.37
UBQLN4-201ENST00000368309 STARD8Q92502 1023 aa17.39■□□□□ 0.37
UBQLN4-201ENST00000368309 VPS35Q96QK1 796 aa17.39■□□□□ 0.37
UBQLN4-201ENST00000368309 DOHHQ9BU89 302 aa17.39■□□□□ 0.37
UBQLN4-201ENST00000368309 TBC1D14Q9P2M4 693 aa17.39■□□□□ 0.37
UBQLN4-201ENST00000368309 WBP4O75554 376 aaKnown RBP17.39■□□□□ 0.37
UBQLN4-201ENST00000368309 IDUAP35475 653 aa17.39■□□□□ 0.37
UBQLN4-201ENST00000368309 GRASPQ7Z6J2 395 aaPredicted RBP17.39■□□□□ 0.37
UBQLN4-201ENST00000368309 IGFN1Q86VF2 1251 aa17.39■□□□□ 0.37
UBQLN4-201ENST00000368309 COX4I2Q96KJ9 171 aa17.39■□□□□ 0.37
UBQLN4-201ENST00000368309 FEVQ99581 238 aa17.39■□□□□ 0.37
UBQLN4-201ENST00000368309 ALOXE3Q9BYJ1 711 aa17.39■□□□□ 0.37
UBQLN4-201ENST00000368309 PRKAB1Q9Y478 270 aa17.39■□□□□ 0.37
UBQLN4-201ENST00000368309 KIAA0100Q14667 2235 aaKnown RBP17.38■□□□□ 0.37
UBQLN4-201ENST00000368309 RGS10O43665 173 aa17.38■□□□□ 0.37
UBQLN4-201ENST00000368309 LRRC26Q2I0M4 334 aa17.38■□□□□ 0.37
UBQLN4-201ENST00000368309 FAHD1Q6P587 224 aa17.38■□□□□ 0.37
UBQLN4-201ENST00000368309 C12orf40Q86WS4 652 aa17.38■□□□□ 0.37
UBQLN4-201ENST00000368309 SH3YL1Q96HL8 342 aaPredicted RBP17.38■□□□□ 0.37
UBQLN4-201ENST00000368309 MAP4K5Q9Y4K4 846 aa17.38■□□□□ 0.37
UBQLN4-201ENST00000368309 TSPAN11A1L157 253 aa17.38■□□□□ 0.37
UBQLN4-201ENST00000368309 M0R3G1 203 aa17.38■□□□□ 0.37
UBQLN4-201ENST00000368309 OCM2P0CE71 109 aa17.38■□□□□ 0.37
UBQLN4-201ENST00000368309 OCMP0CE72 109 aaPredicted RBP17.38■□□□□ 0.37
UBQLN4-201ENST00000368309 TGFBR1P36897 503 aa17.38■□□□□ 0.37
UBQLN4-201ENST00000368309 C2orf80Q0P641 193 aa17.38■□□□□ 0.37
UBQLN4-201ENST00000368309 ZNF554Q86TJ5 538 aa17.38■□□□□ 0.37
UBQLN4-201ENST00000368309 NRTNQ99748 197 aa17.38■□□□□ 0.37
UBQLN4-201ENST00000368309 SLC35A5Q9BS91 424 aa17.38■□□□□ 0.37
UBQLN4-201ENST00000368309 REEP4Q9H6H4 257 aa17.38■□□□□ 0.37
UBQLN4-201ENST00000368309 TRIM39Q9HCM9 518 aa17.38■□□□□ 0.37
UBQLN4-201ENST00000368309 RAD18Q9NS91 495 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms