RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 ZNF184Q99676 751 aaPredicted RBP11.58□□□□□ -0.56
USF1-203ENST00000368021 AIF1LQ9BQI0 150 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 XKR8Q9H6D3 395 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 NT5DC2Q9H857 520 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 FAIMQ9NVQ4 179 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 NMRK1Q9NWW6 199 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 SLC6A14Q9UN76 642 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 POLR3HQ9Y535 204 aaPredicted RBP11.58□□□□□ -0.56
USF1-203ENST00000368021 TDRD6O60522 2096 aaKnown RBP11.58□□□□□ -0.56
USF1-203ENST00000368021 CACNA1EQ15878 2313 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 PRAMEF33A0A0G2JMD5 474 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 A0A1B0GTW7 788 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 A0A1B0GVT2 93 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 FAM234BA2RU67 622 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 FAM221BA6H8Z2 402 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 MAGEB17A8MXT2 336 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 NRP2O60462 931 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 CCNDBP1O95273 360 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 PRPS2P11908 318 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 AMD1P17707 334 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 ENGP17813 658 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 NAT1P18440 290 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 HRH2P25021 359 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 PSMB5P28074 263 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 SERPINB1P30740 379 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 NUDT2P50583 147 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 AFF3P51826 1226 aaKnown RBP11.58□□□□□ -0.56
USF1-203ENST00000368021 SLC25A3Q00325 362 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 REEP5Q00765 189 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 PEAR1Q5VY43 1037 aaPredicted RBP11.58□□□□□ -0.56
USF1-203ENST00000368021 C16orf89Q6UX73 402 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 B3GNT6Q6ZMB0 384 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 TRIM48Q8IWZ4 208 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 NAGSQ8N159 534 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 AVL9Q8NBF6 648 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 GLB1L3Q8NCI6 653 aaPredicted RBP11.58□□□□□ -0.56
USF1-203ENST00000368021 CEP76Q8TAP6 659 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 SLC22A18Q96BI1 424 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 RCN3Q96D15 328 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 EDEM2Q9BV94 578 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 RHBGQ9H310 441 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 ACTL8Q9H568 366 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 CPNE7Q9UBL6 633 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 SUSD2Q9UGT4 822 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 ADAMTS9Q9P2N4 1935 aa11.57□□□□□ -0.56
USF1-203ENST00000368021 HTR3EA5X5Y0 456 aa11.57□□□□□ -0.56
USF1-203ENST00000368021 AIM2O14862 343 aa11.57□□□□□ -0.56
USF1-203ENST00000368021 VIPP01282 170 aa11.57□□□□□ -0.56
USF1-203ENST00000368021 CELA2BP08218 269 aaPredicted RBP11.57□□□□□ -0.56
USF1-203ENST00000368021 CHRM5P08912 532 aaPredicted RBP11.57□□□□□ -0.56
USF1-203ENST00000368021 PCNAP12004 261 aa11.57□□□□□ -0.56
USF1-203ENST00000368021 BCKDHAP12694 445 aa11.57□□□□□ -0.56
USF1-203ENST00000368021 ITGAXP20702 1163 aa11.57□□□□□ -0.56
USF1-203ENST00000368021 ZFP36L2P47974 494 aaKnown RBP11.57□□□□□ -0.56
USF1-203ENST00000368021 ATXN3P54252 364 aaPredicted RBP11.57□□□□□ -0.56
USF1-203ENST00000368021 UFM1P61960 85 aa11.57□□□□□ -0.56
USF1-203ENST00000368021 HNRNPKP61978 463 aaKnown RBP eCLIP11.57□□□□□ -0.56
USF1-203ENST00000368021 DDX39BQ13838 428 aaKnown RBP11.57□□□□□ -0.56
USF1-203ENST00000368021 ZNF423Q2M1K9 1284 aa11.57□□□□□ -0.56
USF1-203ENST00000368021 MMEL1Q495T6 779 aa11.57□□□□□ -0.56
USF1-203ENST00000368021 SPIN4Q56A73 249 aa11.57□□□□□ -0.56
USF1-203ENST00000368021 HACD2Q6Y1H2 254 aa11.57□□□□□ -0.56
USF1-203ENST00000368021 SPATA24Q86W54 205 aa11.57□□□□□ -0.56
USF1-203ENST00000368021 GKN2Q86XP6 184 aa11.57□□□□□ -0.56
USF1-203ENST00000368021 DSELQ8IZU8 1212 aa11.57□□□□□ -0.56
USF1-203ENST00000368021 STMN2Q93045 179 aa11.57□□□□□ -0.56
USF1-203ENST00000368021 APIPQ96GX9 242 aa11.57□□□□□ -0.56
USF1-203ENST00000368021 TEX37Q96LM6 180 aa11.57□□□□□ -0.56
USF1-203ENST00000368021 SH3GL1Q99961 368 aa11.57□□□□□ -0.56
USF1-203ENST00000368021 SPNS1Q9H2V7 528 aa11.57□□□□□ -0.56
USF1-203ENST00000368021 SRMSQ9H3Y6 488 aa11.57□□□□□ -0.56
USF1-203ENST00000368021 CAPN10Q9HC96 672 aa11.57□□□□□ -0.56
USF1-203ENST00000368021 SLC52A3Q9NQ40 469 aa11.57□□□□□ -0.56
USF1-203ENST00000368021 DMRT3Q9NQL9 472 aa11.57□□□□□ -0.56
USF1-203ENST00000368021 CUEDC1Q9NWM3 386 aaPredicted RBP11.57□□□□□ -0.56
USF1-203ENST00000368021 SIRT5Q9NXA8 310 aa11.57□□□□□ -0.56
USF1-203ENST00000368021 STX18Q9P2W9 335 aaKnown RBP11.57□□□□□ -0.56
USF1-203ENST00000368021 SPASTQ9UBP0 616 aa11.57□□□□□ -0.56
USF1-203ENST00000368021 RUVBL1Q9Y265 456 aaKnown RBP11.57□□□□□ -0.56
USF1-203ENST00000368021 NDUFAF1Q9Y375 327 aa11.57□□□□□ -0.56
USF1-203ENST00000368021 TNRC6BQ9UPQ9 1833 aaKnown RBP11.57□□□□□ -0.56
USF1-203ENST00000368021 IGKV1-8A0A0C4DH67 115 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 A0A0J9YVX5 310 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 A0A1W2PP18 115 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 H7BY64 318 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 NR5A2O00482 541 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 FBP2O00757 339 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 ARHGAP33O14559 1287 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 PEBP1P30086 187 aaKnown RBP11.56□□□□□ -0.56
USF1-203ENST00000368021 PGM1P36871 562 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 DPP6P42658 865 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 POLR2JP52435 117 aaKnown RBP11.56□□□□□ -0.56
USF1-203ENST00000368021 NME5P56597 212 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 KCNK10P57789 538 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 YBX1P67809 324 aaKnown RBP11.56□□□□□ -0.56
USF1-203ENST00000368021 CSNK1G2P78368 415 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 ART3Q13508 389 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 GPR18Q14330 331 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 KIR2DS3Q14952 304 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 REP15Q6BDI9 236 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms