RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 UFM1P61960 85 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 SLC7A9P82251 487 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 NDUFAF6Q330K2 333 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 FRRS1Q6ZNA5 592 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 RASSF6Q6ZTQ3 369 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 TMEM174Q8WUU8 243 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 ZNF347Q96SE7 839 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 IL17CQ9P0M4 197 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 MYH2Q9UKX2 1941 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 TYROBPO43914 113 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 LILRB3O75022 631 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 PRKAR1AP10644 381 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 CHAF1BQ13112 559 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 TECRLQ5HYJ1 363 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 RAB41Q5JT25 222 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 NPAS3Q8IXF0 933 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 GPR65Q8IYL9 337 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 OR56A1Q8NGH5 318 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 OR2AJ1Q8NGZ0 328 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 TRIB3Q96RU7 358 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 MRPS26Q9BYN8 205 aaKnown RBP11.2□□□□□ -0.62
SYNE1-204ENST00000367248 SSR3Q9UNL2 185 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 DRGXA6NNA5 263 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 C4BPBP20851 252 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 FDXRP22570 491 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 PBX2P40425 430 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 TMED10P49755 219 aaKnown RBP11.2□□□□□ -0.62
SYNE1-204ENST00000367248 AGTR2P50052 363 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 CDK6Q00534 326 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 GANABQ14697 944 aaKnown RBP11.2□□□□□ -0.62
SYNE1-204ENST00000367248 HNRNPA1L2Q32P51 320 aaKnown RBP11.2□□□□□ -0.62
SYNE1-204ENST00000367248 STEAP4Q687X5 459 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 OR6K6Q8NGW6 343 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 DHRS1Q96LJ7 313 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 PCDHAC1Q9H158 963 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 POLR2J3Q9H1A7 115 aaKnown RBP11.2□□□□□ -0.62
SYNE1-204ENST00000367248 CENPMQ9NSP4 180 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 DAPK2Q9UIK4 370 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 KAT6AQ92794 2004 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 WWP2O00308 870 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 TRAP1Q12931 704 aaKnown RBP11.2□□□□□ -0.62
SYNE1-204ENST00000367248 PTGES3Q15185 160 aaKnown RBP11.2□□□□□ -0.62
SYNE1-204ENST00000367248 ZNF630Q2M218 657 aaPredicted RBP11.2□□□□□ -0.62
SYNE1-204ENST00000367248 FAM69BQ5VUD6 431 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 Q6ZSR6 202 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 MGME1Q9BQP7 344 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 PCDHGA2Q9Y5H1 932 aa11.2□□□□□ -0.62
SYNE1-204ENST00000367248 ABLIM1O14639 778 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 SCO2O43819 266 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 ANGPTL1O95841 491 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 OPN1SWP03999 348 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 FGF3P11487 239 aaPredicted RBP11.19□□□□□ -0.62
SYNE1-204ENST00000367248 ABHD18Q0P651 414 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 C6orf136Q5SQH8 315 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 LRCH3Q96II8 777 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 CCNL2Q96S94 520 aaPredicted RBP11.19□□□□□ -0.62
SYNE1-204ENST00000367248 FAM92AA1XBS5 289 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 RGS10O43665 173 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 GSK3BP49841 420 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 ZNF763Q0D2J5 394 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 TLR1Q15399 786 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 DEFB134Q4QY38 66 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 ANKRD26P1Q6NSI1 321 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 ALKAL1Q6UXT8 129 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 MAFAQ8NHW3 353 aaPredicted RBP11.19□□□□□ -0.62
SYNE1-204ENST00000367248 SDHAF3Q9NRP4 125 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 SCML1Q9UN30 329 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 A0A1W2PP18 115 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 FEZF1A0PJY2 475 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 M0QX08 132 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 MPZL2O60487 215 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 GSTM4Q03013 218 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 ZNF234Q14588 700 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.19□□□□□ -0.62
SYNE1-204ENST00000367248 NOXRED1Q6NXP6 359 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 CBARPQ8N350 705 aaPredicted RBP11.19□□□□□ -0.62
SYNE1-204ENST00000367248 NKD1Q969G9 470 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 ZNF317Q96PQ6 595 aaPredicted RBP11.19□□□□□ -0.62
SYNE1-204ENST00000367248 RIMKLBQ9ULI2 386 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 ARPC2O15144 300 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 ATF6P18850 670 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 OMPP47874 163 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 CAPZA1P52907 286 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 GALNTL5Q7Z4T8 443 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 ARFGAP1Q8N6T3 406 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 ZNF611Q8N823 705 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 C1GALT1C1Q96EU7 318 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 MEAF6Q9HAF1 191 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 LYARQ9NX58 379 aaKnown RBP11.19□□□□□ -0.62
SYNE1-204ENST00000367248 ZCWPW2A0A1B0GU75 182 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 WASH4PA8MWX3 477 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 RCVRNP35243 200 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 STAT5AP42229 794 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 CCT3P49368 545 aaKnown RBP11.19□□□□□ -0.62
SYNE1-204ENST00000367248 CXorf57Q6NSI4 855 aaKnown RBP11.19□□□□□ -0.62
SYNE1-204ENST00000367248 CDHR3Q6ZTQ4 885 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 SATL1Q86VE3 508 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 PHTF2Q8N3S3 785 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 SNX33Q8WV41 574 aa11.19□□□□□ -0.62
SYNE1-204ENST00000367248 ASB9Q96DX5 294 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms