RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 CDKL4Q5MAI5 379 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 SYPL2Q5VXT5 272 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 TMEM225Q6GV28 225 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 OLFML1Q6UWY5 402 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 TMIGD1Q6UXZ0 262 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 MAGEE1Q9HCI5 957 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 ACSL5Q9ULC5 683 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 ACOX3O15254 700 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 HOXB9P17482 250 aaPredicted RBP15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 ENDOUP21128 410 aaKnown RBP15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 POU6F2P78424 691 aaPredicted RBP15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 ZNF267Q14586 743 aaPredicted RBP15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 SYCE2Q6PIF2 218 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 GOLGA7Q7Z5G4 137 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 FOXRED2Q8IWF2 684 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 NIPA2Q8N8Q9 360 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 BRI3BPQ8WY22 251 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 CXorf21Q9HAI6 301 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 IGLV3-22A0A075B6J6 115 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 STOMP27105 288 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 RPS21P63220 83 aaKnown RBP15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 SLC3A1Q07837 685 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 PMS2P3Q13401 168 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 ABRAXAS2Q15018 415 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 NELFAQ9H3P2 528 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 HRASLS2Q9NWW9 162 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 VNN3Q9NY84 501 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 NLGN3Q9NZ94 848 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 KIAA1210Q9ULL0 1709 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 OAZ2O95190 189 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 ANXA3P12429 323 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 EPCAMP16422 314 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 SLC11A1P49279 550 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 HERC3Q15034 1050 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 ZNF550Q7Z398 422 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 ZNF100Q8IYN0 542 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 RAB2BQ8WUD1 216 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 OTUB2Q96DC9 234 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 DEFB126Q9BYW3 111 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 HCN2Q9UL51 889 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 SLC7A11Q9UPY5 501 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 GPR89AB7ZAQ6 455 aa15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 GPR89BP0CG08 455 aa15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 RPL26P61254 145 aaKnown RBP15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 ZNF630Q2M218 657 aaPredicted RBP15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 DCAF4L2Q8NA75 395 aa15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 OR2M4Q96R27 311 aa15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 UNCXA6NJT0 531 aa15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 PEX14O75381 377 aa15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 OPN1SWP03999 348 aa15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 ARHGAP1Q07960 439 aa15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 DSG2Q14126 1118 aa15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 ADGRE1Q14246 886 aa15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 SEC23BQ15437 767 aa15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 QPCTQ16769 361 aa15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 ASB18Q6ZVZ8 466 aa15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 NRROSQ86YC3 692 aa15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 TMEM41AQ96HV5 264 aa15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 HPF1Q9NWY4 346 aa15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 PPP4R1LQ9P1A2 415 aa15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 KCNS2Q9ULS6 477 aa15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 TTC24A2A3L6 582 aaPredicted RBP15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 ACVRL1P37023 503 aa15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 GDF10P55107 478 aa15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 NCBP2-AS2Q69YL0 99 aa15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 TAS1R3Q7RTX0 852 aa15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 TMED9Q9BVK6 235 aa15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 FN3KQ9H479 309 aa15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 SFXN1Q9H9B4 322 aa15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 TAS2R9Q9NYW1 312 aa15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 ARPC2O15144 300 aa15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 OXTRP30559 389 aa15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 PGM2L1Q6PCE3 622 aa15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 CENPSQ8N2Z9 138 aa15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 ZNF285Q96NJ3 590 aa15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 POLDIP3Q9BY77 421 aaKnown RBP15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 SYPP08247 313 aa15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 HLA-EP13747 358 aa15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 KCNQ1P51787 676 aa15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 ZNF598Q86UK7 904 aaKnown RBP15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 METTL27Q8N6F8 245 aaPredicted RBP15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 FAM120CQ9NX05 1096 aaKnown RBP15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 MS4A12Q9NXJ0 267 aa15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 FETUBQ9UGM5 382 aa15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 NOCTQ9UK39 431 aaKnown RBP15.22■□□□□ 0.03
NUCKS1-201ENST00000367142 AQP12BA6NM10 295 aa15.21■□□□□ 0.03
NUCKS1-201ENST00000367142 RPS13P62277 151 aaKnown RBP15.21■□□□□ 0.03
NUCKS1-201ENST00000367142 DAG1Q14118 895 aa15.21■□□□□ 0.03
NUCKS1-201ENST00000367142 ZNF792Q3KQV3 632 aa15.21■□□□□ 0.03
NUCKS1-201ENST00000367142 OGFOD2Q6N063 350 aa15.21■□□□□ 0.03
NUCKS1-201ENST00000367142 AQP12AQ8IXF9 295 aa15.21■□□□□ 0.03
NUCKS1-201ENST00000367142 FBXL18Q96ME1 805 aa15.21■□□□□ 0.03
NUCKS1-201ENST00000367142 NAA11Q9BSU3 229 aaPredicted RBP15.21■□□□□ 0.03
NUCKS1-201ENST00000367142 TTYH3Q9C0H2 523 aa15.21■□□□□ 0.03
NUCKS1-201ENST00000367142 OXSMQ9NWU1 459 aa15.21■□□□□ 0.03
NUCKS1-201ENST00000367142 PCDHGB6Q9Y5F9 930 aa15.21■□□□□ 0.03
NUCKS1-201ENST00000367142 OR5K4A6NMS3 321 aa15.21■□□□□ 0.03
NUCKS1-201ENST00000367142 FAM227AF5H4B4 570 aa15.21■□□□□ 0.03
NUCKS1-201ENST00000367142 RAD51DO75771 328 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms