RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 RGL4Q8IZJ4 473 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 GAB3Q8WWW8 586 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 SOBPA7XYQ1 873 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 GTPBP1O00178 669 aaKnown RBP11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 PFKMP08237 780 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 RPP38P78345 283 aaKnown RBP11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 ELOAQ14241 798 aaKnown RBP11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 PTCHD3Q3KNS1 767 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 TMCO2Q7Z6W1 182 aaPredicted RBP11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 ACOT12Q8WYK0 555 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 RIT1Q92963 219 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 SLC22A18Q96BI1 424 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 FERD3LQ96RJ6 166 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 CCSER2Q9H7U1 834 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 OR1F1O43749 312 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 DCDC5Q6ZRR9 648 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 COMMD2Q86X83 199 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 COMMD4Q9H0A8 199 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 PCDHB11Q9Y5F2 797 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 RPS17P08708 135 aaKnown RBP11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 ESAMQ96AP7 390 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 DPAGT1Q9H3H5 408 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 ISM1B1AKI9 464 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 XPNPEP2O43895 674 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 MMP20O60882 483 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 MAPK3P27361 379 aaPredicted RBP11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 KDELR2P33947 212 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 AGTR2P50052 363 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 CEPT1Q9Y6K0 416 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 FUOMA2VDF0 154 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 CDH11P55287 796 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 CCDC115Q96NT0 180 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 REEP4Q9H6H4 257 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 A0A1W2PRG6 482 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 ANXA2P2A6NMY6 339 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 UPK3BL1B0FP48 263 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 UPK3BL2E5RIL1 263 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 CAPN5O15484 640 aaPredicted RBP11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 TBX18O95935 607 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 ANXA2P07355 339 aaKnown RBP11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 RYKP34925 604 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 DCDC1P59894 354 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 FATE1Q969F0 183 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 NLGN3Q9NZ94 848 aa11.42□□□□□ -0.58
CDC42BPA-202ENST00000366764 GBX2P52951 348 aaPredicted RBP11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 OR4D2P58180 307 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 ABATP80404 500 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 SERPINA11Q86U17 422 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 EQTNQ9NQ60 294 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 MAGED1Q9Y5V3 778 aaPredicted RBP11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 PMF1-BGLAPU3KQ54 211 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 NCBP2P52298 156 aaKnown RBP eCLIP11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 RPTNQ6XPR3 784 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 LRIG1Q96JA1 1093 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 FAM129BQ96TA1 746 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 TXNRD2Q9NNW7 524 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 ACRV1P26436 265 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 TIA1P31483 386 aaKnown RBP eCLIP11.41□□□□□ -0.587e-6■■■□□ 15.8
CDC42BPA-202ENST00000366764 ARCN1P48444 511 aaKnown RBP11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 ST3GAL3Q11203 375 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 IDNKQ5T6J7 187 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 DTWD1Q8N5C7 304 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 SLC5A11Q8WWX8 675 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 FUBP1Q96AE4 644 aaKnown RBP11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 TCRBV5S1A1TA0A578 114 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 MPC1LP0DKB6 136 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 GPX3P22352 226 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 HOXA11P31270 313 aaPredicted RBP11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 NOGQ13253 232 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 DCUN1D3Q8IWE4 304 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 ADGRG2Q8IZP9 1017 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 PKP4Q99569 1192 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 TTC24A2A3L6 582 aaPredicted RBP11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 CAPN3P20807 821 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 CD68P34810 354 aaPredicted RBP11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 TRAM2Q15035 370 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 GDPD4Q6W3E5 623 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 GDPD1Q8N9F7 314 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 CHPT1Q8WUD6 406 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 IFT27Q9BW83 186 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 FBXL21Q9UKT6 434 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 MCIDASD6RGH6 385 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 ENPP3O14638 875 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 IFNA6P05013 189 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 XKR4Q5GH76 650 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 WDR6Q9NNW5 1121 aaKnown RBP11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 DCAF13Q9NV06 445 aaKnown RBP11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 WASH4PA8MWX3 477 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 VEZF1Q14119 521 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 MANEALQ5VSG8 457 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 KRT77Q7Z794 578 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 TOMM5Q8N4H5 51 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 DMRTB1Q96MA1 342 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 LIPT1Q9Y234 373 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 GSRP00390 522 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 VIPR1P32241 457 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 QSOX2Q6ZRP7 698 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 MOB2Q70IA6 237 aa11.41□□□□□ -0.58
CDC42BPA-202ENST00000366764 OR8H3Q8N146 312 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms