RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 TRIM33Q9UPN9 1127 aa19.74■□□□□ 0.75
SHISA4-201ENST00000362011 CCL27Q9Y4X3 112 aa19.74■□□□□ 0.75
SHISA4-201ENST00000362011 AP1M2Q9Y6Q5 423 aa19.74■□□□□ 0.75
SHISA4-201ENST00000362011 SCN3AQ9NY46 2000 aa19.73■□□□□ 0.75
SHISA4-201ENST00000362011 SLC9B1P1A6NJY1 282 aa19.73■□□□□ 0.75
SHISA4-201ENST00000362011 E9PBE3 544 aa19.73■□□□□ 0.75
SHISA4-201ENST00000362011 LSM1O15116 133 aaKnown RBP19.73■□□□□ 0.75
SHISA4-201ENST00000362011 RRP9O43818 475 aaKnown RBP19.73■□□□□ 0.75
SHISA4-201ENST00000362011 KLHL41O60662 606 aa19.73■□□□□ 0.75
SHISA4-201ENST00000362011 PEX11AO75192 247 aa19.73■□□□□ 0.75
SHISA4-201ENST00000362011 DCTN3O75935 186 aa19.73■□□□□ 0.75
SHISA4-201ENST00000362011 RPLP0P05388 317 aaKnown RBP19.73■□□□□ 0.75
SHISA4-201ENST00000362011 PRR35P0CG20 571 aa19.73■□□□□ 0.75
SHISA4-201ENST00000362011 PRPH2P23942 346 aa19.73■□□□□ 0.75
SHISA4-201ENST00000362011 ACP1P24666 158 aa19.73■□□□□ 0.75
SHISA4-201ENST00000362011 CYP4F3Q08477 520 aa19.73■□□□□ 0.75
SHISA4-201ENST00000362011 GALNTL6Q49A17 601 aa19.73■□□□□ 0.75
SHISA4-201ENST00000362011 SPDYAQ5MJ70 313 aa19.73■□□□□ 0.75
SHISA4-201ENST00000362011 CACHD1Q5VU97 1274 aa19.73■□□□□ 0.75
SHISA4-201ENST00000362011 RNF44Q7L0R7 432 aa19.73■□□□□ 0.75
SHISA4-201ENST00000362011 VN1R5Q7Z5H4 357 aa19.73■□□□□ 0.75
SHISA4-201ENST00000362011 TRPV3Q8NET8 790 aa19.73■□□□□ 0.75
SHISA4-201ENST00000362011 CMTM7Q96FZ5 175 aa19.73■□□□□ 0.75
SHISA4-201ENST00000362011 SERPINI1Q99574 410 aa19.73■□□□□ 0.75
SHISA4-201ENST00000362011 ZFYVE21Q9BQ24 234 aa19.73■□□□□ 0.75
SHISA4-201ENST00000362011 SYNDIG1Q9H7V2 258 aa19.73■□□□□ 0.75
SHISA4-201ENST00000362011 LRTM1Q9HBL6 345 aa19.73■□□□□ 0.75
SHISA4-201ENST00000362011 NMRK1Q9NWW6 199 aa19.73■□□□□ 0.75
SHISA4-201ENST00000362011 GIMAP2Q9UG22 337 aa19.73■□□□□ 0.75
SHISA4-201ENST00000362011 KLHL3Q9UH77 587 aa19.73■□□□□ 0.75
SHISA4-201ENST00000362011 PILRAQ9UKJ1 303 aa19.73■□□□□ 0.75
SHISA4-201ENST00000362011 A0A0J9YVX5 310 aa19.72■□□□□ 0.75
SHISA4-201ENST00000362011 NPIPB8E9PQR5 432 aa19.72■□□□□ 0.75
SHISA4-201ENST00000362011 KIF1CO43896 1103 aaKnown RBP19.72■□□□□ 0.75
SHISA4-201ENST00000362011 CTSVO60911 334 aa19.72■□□□□ 0.75
SHISA4-201ENST00000362011 CLEC3AO75596 197 aa19.72■□□□□ 0.75
SHISA4-201ENST00000362011 RASSF9O75901 435 aa19.72■□□□□ 0.75
SHISA4-201ENST00000362011 CPNE6O95741 557 aa19.72■□□□□ 0.75
SHISA4-201ENST00000362011 TGFB1P01137 390 aa19.72■□□□□ 0.75
SHISA4-201ENST00000362011 ZIC1Q15915 447 aa19.72■□□□□ 0.75
SHISA4-201ENST00000362011 CLPPQ16740 277 aaPredicted RBP19.72■□□□□ 0.75
SHISA4-201ENST00000362011 SMU1Q2TAY7 513 aa19.72■□□□□ 0.75
SHISA4-201ENST00000362011 C6orf136Q5SQH8 315 aa19.72■□□□□ 0.75
SHISA4-201ENST00000362011 METTL21CQ5VZV1 264 aa19.72■□□□□ 0.75
SHISA4-201ENST00000362011 OGFOD2Q6N063 350 aa19.72■□□□□ 0.75
SHISA4-201ENST00000362011 FBXO42Q6P3S6 717 aa19.72■□□□□ 0.75
SHISA4-201ENST00000362011 TMEM71Q6P5X7 295 aa19.72■□□□□ 0.75
SHISA4-201ENST00000362011 SPATA19Q7Z5L4 167 aa19.72■□□□□ 0.75
SHISA4-201ENST00000362011 SLCO6A1Q86UG4 719 aa19.72■□□□□ 0.75
SHISA4-201ENST00000362011 TCTN2Q96GX1 697 aa19.72■□□□□ 0.75
SHISA4-201ENST00000362011 NUDT22Q9BRQ3 303 aa19.72■□□□□ 0.75
SHISA4-201ENST00000362011 MS4A8Q9BY19 250 aa19.72■□□□□ 0.75
SHISA4-201ENST00000362011 C1orf109Q9NX04 203 aa19.72■□□□□ 0.75
SHISA4-201ENST00000362011 VPS29Q9UBQ0 182 aa19.72■□□□□ 0.75
SHISA4-201ENST00000362011 ATXN7L1Q9ULK2 861 aaPredicted RBP19.72■□□□□ 0.75
SHISA4-201ENST00000362011 A0A1W2PQM1 296 aa19.71■□□□□ 0.75
SHISA4-201ENST00000362011 MAP3K7O43318 606 aa19.71■□□□□ 0.75
SHISA4-201ENST00000362011 PRAMEF10O60809 474 aa19.71■□□□□ 0.75
SHISA4-201ENST00000362011 CCDC22O60826 627 aa19.71■□□□□ 0.75
SHISA4-201ENST00000362011 ZBTB11O95625 1053 aaPredicted RBP19.71■□□□□ 0.75
SHISA4-201ENST00000362011 SERPIND1P05546 499 aa19.71■□□□□ 0.75
SHISA4-201ENST00000362011 GP1BAP07359 652 aa19.71■□□□□ 0.75
SHISA4-201ENST00000362011 PTX3P26022 381 aaPredicted RBP19.71■□□□□ 0.75
SHISA4-201ENST00000362011 MLLT3P42568 568 aaPredicted RBP19.71■□□□□ 0.75
SHISA4-201ENST00000362011 ERVK-8P63133 956 aa19.71■□□□□ 0.75
SHISA4-201ENST00000362011 MAD2L1Q13257 205 aaPredicted RBP19.71■□□□□ 0.75
SHISA4-201ENST00000362011 AP5B1Q2VPB7 878 aa19.71■□□□□ 0.75
SHISA4-201ENST00000362011 ZC3H12BQ5HYM0 836 aaKnown RBP19.71■□□□□ 0.75
SHISA4-201ENST00000362011 PRSS42Q7Z5A4 293 aa19.71■□□□□ 0.75
SHISA4-201ENST00000362011 ZFAND4Q86XD8 727 aa19.71■□□□□ 0.75
SHISA4-201ENST00000362011 CREB3L4Q8TEY5 395 aa19.71■□□□□ 0.75
SHISA4-201ENST00000362011 SOHLH2Q9NX45 425 aa19.71■□□□□ 0.75
SHISA4-201ENST00000362011 TMEM9Q9P0T7 183 aa19.71■□□□□ 0.75
SHISA4-201ENST00000362011 CROCCQ5TZA2 2017 aa19.7■□□□□ 0.74
SHISA4-201ENST00000362011 IGHV5-51A0A0C4DH38 117 aa19.7■□□□□ 0.74
SHISA4-201ENST00000362011 UBDO15205 165 aa19.7■□□□□ 0.74
SHISA4-201ENST00000362011 SEC22BO75396 215 aa19.7■□□□□ 0.74
SHISA4-201ENST00000362011 ETHE1O95571 254 aa19.7■□□□□ 0.74
SHISA4-201ENST00000362011 SERPINA6P08185 405 aa19.7■□□□□ 0.74
SHISA4-201ENST00000362011 NCF2P19878 526 aaPredicted RBP19.7■□□□□ 0.74
SHISA4-201ENST00000362011 RPL38P63173 70 aaKnown RBP19.7■□□□□ 0.74
SHISA4-201ENST00000362011 CUL3Q13618 768 aa19.7■□□□□ 0.74
SHISA4-201ENST00000362011 SNAP47Q5SQN1 464 aa19.7■□□□□ 0.74
SHISA4-201ENST00000362011 ASPGQ86U10 573 aa19.7■□□□□ 0.74
SHISA4-201ENST00000362011 KMT5CQ86Y97 462 aa19.7■□□□□ 0.74
SHISA4-201ENST00000362011 FNDC5Q8NAU1 212 aa19.7■□□□□ 0.74
SHISA4-201ENST00000362011 RERGQ96A58 199 aaPredicted RBP19.7■□□□□ 0.74
SHISA4-201ENST00000362011 METTL2AQ96IZ6 378 aaKnown RBP19.7■□□□□ 0.74
SHISA4-201ENST00000362011 CATSPER2Q96P56 530 aa19.7■□□□□ 0.74
SHISA4-201ENST00000362011 FCRL4Q96PJ5 515 aa19.7■□□□□ 0.74
SHISA4-201ENST00000362011 OR2A5Q96R48 311 aa19.7■□□□□ 0.74
SHISA4-201ENST00000362011 GFM1Q96RP9 751 aaKnown RBP19.7■□□□□ 0.74
SHISA4-201ENST00000362011 CDC6Q99741 560 aa19.7■□□□□ 0.74
SHISA4-201ENST00000362011 CHRNA10Q9GZZ6 450 aa19.7■□□□□ 0.74
SHISA4-201ENST00000362011 OR51B5Q9H339 312 aa19.7■□□□□ 0.74
SHISA4-201ENST00000362011 PDE7BQ9NP56 450 aa19.7■□□□□ 0.74
SHISA4-201ENST00000362011 TOR4AQ9NXH8 423 aa19.7■□□□□ 0.74
SHISA4-201ENST00000362011 SEMA5BQ9P283 1151 aa19.7■□□□□ 0.74
SHISA4-201ENST00000362011 DKK4Q9UBT3 224 aa19.7■□□□□ 0.74
SHISA4-201ENST00000362011 FCHO1O14526 889 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms