RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 THOC6Q86W42 341 aaKnown RBP15.57■□□□□ 0.08
COL18A1-203ENST00000359759 CERS5Q8N5B7 392 aa15.57■□□□□ 0.08
COL18A1-203ENST00000359759 C6orf47O95873 294 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 GSTM3P21266 225 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 GLP1RP43220 463 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 WDR4P57081 412 aaKnown RBP15.56■□□□□ 0.08
COL18A1-203ENST00000359759 PTP4A2Q12974 167 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 NFE2L1Q14494 772 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 DNAJB8Q8NHS0 232 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 ATG5Q9H1Y0 275 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 SAV1Q9H4B6 383 aaPredicted RBP15.56■□□□□ 0.08
COL18A1-203ENST00000359759 EIF2B3Q9NR50 452 aaKnown RBP15.56■□□□□ 0.08
COL18A1-203ENST00000359759 PXDNQ92626 1479 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 B4GALT2O60909 372 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 CREG1O75629 220 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 RCBTB2O95199 551 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 FKBP1AP62942 108 aaKnown RBP15.56■□□□□ 0.08
COL18A1-203ENST00000359759 TUBA1BP68363 451 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 SLC24A5Q71RS6 500 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 TUBA1AQ71U36 451 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 OR4F6Q8NGB9 312 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 USP29Q9HBJ7 922 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 WASF3Q9UPY6 502 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 LOC730098B7Z3J9 87 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 CDK6Q00534 326 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 CHRNA6Q15825 494 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 ZNF792Q3KQV3 632 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 SPIN4Q56A73 249 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 CCDC28AQ8IWP9 274 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 OR2S2Q9NQN1 319 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 IGSF9Q9P2J2 1179 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 GALPQ9UBC7 116 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 MYOCOSA0A1B0GUC4 107 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 CLCA1A8K7I4 914 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 ASPAP45381 313 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 GSK3BP49841 420 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 ID2Q02363 134 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 TIGD4Q8IY51 512 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 TCEANCQ8N8B7 351 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 PFDN5Q99471 154 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 HNRNPABQ99729 332 aaKnown RBP15.56■□□□□ 0.08
COL18A1-203ENST00000359759 ACBD6Q9BR61 282 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 PCDHB14Q9Y5E9 798 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 CPED1A4D0V7 1026 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 DPY19L1Q2PZI1 675 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 CARD16Q5EG05 197 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 DNM1P34Q6PK57 102 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 HMGN2P46Q86SG4 172 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 CD180Q99467 661 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 TREX2Q9BQ50 279 aaPredicted RBP15.56■□□□□ 0.08
COL18A1-203ENST00000359759 OR10A4Q9H209 315 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 ZNF701Q9NV72 531 aaPredicted RBP15.56■□□□□ 0.08
COL18A1-203ENST00000359759 EXTL2Q9UBQ6 330 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 RIPK3Q9Y572 518 aa15.56■□□□□ 0.08
COL18A1-203ENST00000359759 A0A1B0GVI7 797 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 RNF13O43567 381 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 SELPP16109 830 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 CCND3P30281 292 aaPredicted RBP15.55■□□□□ 0.08
COL18A1-203ENST00000359759 NR4A2P43354 598 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 CLRN1P58418 232 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 MLIPQ5VWP3 458 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 GRHL2Q6ISB3 625 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 FIP1L1Q6UN15 594 aaKnown RBP15.55■□□□□ 0.08
COL18A1-203ENST00000359759 OR6Q1Q8NGQ2 317 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 CNIH3Q8TBE1 160 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 TEX13CA0A0J9YWL9 993 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 PROM1O43490 865 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 HLA-DPB1P04440 258 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 G6PDP11413 515 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 ACTR1BP42025 376 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 ACTR1AP61163 376 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 RPS13P62277 151 aaKnown RBP15.55■□□□□ 0.08
COL18A1-203ENST00000359759 GRIK2Q13002 908 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 COL9A2Q14055 689 aaPredicted RBP15.55■□□□□ 0.08
COL18A1-203ENST00000359759 KRBOX4Q5JUW0 171 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 RNF130Q86XS8 419 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 SLC32A1Q9H598 525 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 LDAHQ9H6V9 325 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 B3GAT2Q9NPZ5 323 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 SDHAF3Q9NRP4 125 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 GABRDO14764 452 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 ADAMTS3O15072 1205 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 INPPL1O15357 1258 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 HCAR3P49019 387 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 PON3Q15166 354 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 PHF19Q5T6S3 580 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 KIAA0930Q6ICG6 404 aaPredicted RBP15.55■□□□□ 0.08
COL18A1-203ENST00000359759 ZDHHC24Q6UX98 284 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 SAMD14Q8IZD0 417 aaPredicted RBP15.55■□□□□ 0.08
COL18A1-203ENST00000359759 DEFB119Q8N690 84 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 TMEM246Q9BRR3 403 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 OSBPL2Q9H1P3 480 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 RPF2Q9H7B2 306 aaKnown RBP15.55■□□□□ 0.08
COL18A1-203ENST00000359759 MAN2C1Q9NTJ4 1040 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 GIMAP2Q9UG22 337 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 RNF11Q9Y3C5 154 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 A0A1W2PPW3 197 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 BTBD19C9JJ37 291 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 LRRN3E7EW58 273 aa15.55■□□□□ 0.08
COL18A1-203ENST00000359759 ZNF182P17025 639 aaPredicted RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms