RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 USP39Q53GS9 565 aaKnown RBP14.4□□□□□ -0.1
UBAP1-202ENST00000359544 PLET1Q6UQ28 207 aa14.4□□□□□ -0.1
UBAP1-202ENST00000359544 Q6ZPB1 254 aaPredicted RBP14.4□□□□□ -0.1
UBAP1-202ENST00000359544 SPRED2Q7Z698 418 aa14.4□□□□□ -0.1
UBAP1-202ENST00000359544 FAM9CQ8IZT9 166 aa14.4□□□□□ -0.1
UBAP1-202ENST00000359544 BTN2A2Q8WVV5 523 aa14.4□□□□□ -0.1
UBAP1-202ENST00000359544 HERVK_113Q902F9 699 aa14.4□□□□□ -0.1
UBAP1-202ENST00000359544 TAPBPLQ9BX59 468 aa14.4□□□□□ -0.1
UBAP1-202ENST00000359544 EXOSC4Q9NPD3 245 aaKnown RBP14.4□□□□□ -0.1
UBAP1-202ENST00000359544 IMPAD1Q9NX62 359 aa14.4□□□□□ -0.1
UBAP1-202ENST00000359544 GLTPQ9NZD2 209 aa14.4□□□□□ -0.1
UBAP1-202ENST00000359544 CNOT2Q9NZN8 540 aaKnown RBP14.4□□□□□ -0.1
UBAP1-202ENST00000359544 TRPV2Q9Y5S1 764 aa14.4□□□□□ -0.1
UBAP1-202ENST00000359544 HS3ST4Q9Y661 456 aa14.4□□□□□ -0.1
UBAP1-202ENST00000359544 REV3LO60673 3130 aa14.4□□□□□ -0.1
UBAP1-202ENST00000359544 GFRA2O00451 464 aa14.4□□□□□ -0.1
UBAP1-202ENST00000359544 OR7A10O76100 309 aa14.4□□□□□ -0.1
UBAP1-202ENST00000359544 CBLP22681 906 aa14.4□□□□□ -0.1
UBAP1-202ENST00000359544 CSTF2P33240 577 aaKnown RBP eCLIP14.4□□□□□ -0.1
UBAP1-202ENST00000359544 ETV3P41162 512 aa14.4□□□□□ -0.1
UBAP1-202ENST00000359544 SLC9A3P48764 834 aa14.4□□□□□ -0.1
UBAP1-202ENST00000359544 CDC42EP1Q00587 391 aa14.4□□□□□ -0.1
UBAP1-202ENST00000359544 DMC1Q14565 340 aa14.4□□□□□ -0.1
UBAP1-202ENST00000359544 GLYR1Q49A26 553 aaPredicted RBP14.4□□□□□ -0.1
UBAP1-202ENST00000359544 FAM26DQ5JW98 314 aa14.4□□□□□ -0.1
UBAP1-202ENST00000359544 SUSD1Q6UWL2 747 aa14.4□□□□□ -0.1
UBAP1-202ENST00000359544 CCDC149Q6ZUS6 474 aa14.4□□□□□ -0.1
UBAP1-202ENST00000359544 TRIM46Q7Z4K8 759 aa14.4□□□□□ -0.1
UBAP1-202ENST00000359544 CD200R1Q8TD46 325 aa14.4□□□□□ -0.1
UBAP1-202ENST00000359544 OR5M11Q96RB7 305 aa14.4□□□□□ -0.1
UBAP1-202ENST00000359544 INPP5KQ9BT40 448 aa14.4□□□□□ -0.1
UBAP1-202ENST00000359544 BARHL1Q9BZE3 327 aa14.4□□□□□ -0.1
UBAP1-202ENST00000359544 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.4□□□□□ -0.1
UBAP1-202ENST00000359544 PADI3Q9ULW8 664 aa14.4□□□□□ -0.1
UBAP1-202ENST00000359544 DUSP12Q9UNI6 340 aa14.4□□□□□ -0.1
UBAP1-202ENST00000359544 POFUT2Q9Y2G5 429 aa14.4□□□□□ -0.1
UBAP1-202ENST00000359544 M0QZ92 97 aa14.39□□□□□ -0.11
UBAP1-202ENST00000359544 MOCS2O96007 188 aaPredicted RBP14.39□□□□□ -0.11
UBAP1-202ENST00000359544 CSF3P09919 207 aa14.39□□□□□ -0.11
UBAP1-202ENST00000359544 DDX5P17844 614 aaKnown RBP14.39□□□□□ -0.11
UBAP1-202ENST00000359544 GABRB1P18505 474 aa14.39□□□□□ -0.11
UBAP1-202ENST00000359544 RAB25P57735 213 aa14.39□□□□□ -0.11
UBAP1-202ENST00000359544 WDR5P61964 334 aaKnown RBP14.39□□□□□ -0.11
UBAP1-202ENST00000359544 RPS14P62263 151 aaKnown RBP14.39□□□□□ -0.11
UBAP1-202ENST00000359544 HMGCS1Q01581 520 aa14.39□□□□□ -0.11
UBAP1-202ENST00000359544 LPCAT1Q8NF37 534 aa14.39□□□□□ -0.11
UBAP1-202ENST00000359544 DNAJA4Q8WW22 397 aaPredicted RBP14.39□□□□□ -0.11
UBAP1-202ENST00000359544 KIAA1143Q96AT1 154 aaPredicted RBP14.39□□□□□ -0.11
UBAP1-202ENST00000359544 SENP8Q96LD8 212 aa14.39□□□□□ -0.11
UBAP1-202ENST00000359544 POLR1EQ9GZS1 481 aaKnown RBP14.39□□□□□ -0.11
UBAP1-202ENST00000359544 RACGAP1Q9H0H5 632 aa14.39□□□□□ -0.11
UBAP1-202ENST00000359544 ZNF226Q9NYT6 803 aa14.39□□□□□ -0.11
UBAP1-202ENST00000359544 VPS4AQ9UN37 437 aa14.39□□□□□ -0.11
UBAP1-202ENST00000359544 HSPB11Q9Y547 144 aa14.39□□□□□ -0.11
UBAP1-202ENST00000359544 XIRP2A4UGR9 3374 aa14.39□□□□□ -0.11
UBAP1-202ENST00000359544 LINC00862A6NCI5 91 aa14.39□□□□□ -0.11
UBAP1-202ENST00000359544 RFXANKO14593 260 aa14.39□□□□□ -0.11
UBAP1-202ENST00000359544 PROM1O43490 865 aa14.39□□□□□ -0.11
UBAP1-202ENST00000359544 NIPSNAP2O75323 286 aa14.39□□□□□ -0.11
UBAP1-202ENST00000359544 ULK1O75385 1050 aa14.39□□□□□ -0.11
UBAP1-202ENST00000359544 GSTM1P09488 218 aa14.39□□□□□ -0.11
UBAP1-202ENST00000359544 PTPN6P29350 595 aa14.39□□□□□ -0.11
UBAP1-202ENST00000359544 KIR2DL3P43628 341 aa14.39□□□□□ -0.11
UBAP1-202ENST00000359544 CLDN8P56748 225 aa14.39□□□□□ -0.11
UBAP1-202ENST00000359544 ANGPT1Q15389 498 aa14.39□□□□□ -0.11
UBAP1-202ENST00000359544 SSX1Q16384 188 aa14.39□□□□□ -0.11
UBAP1-202ENST00000359544 TATDN3Q17R31 274 aa14.39□□□□□ -0.11
UBAP1-202ENST00000359544 MSANTD1Q6ZTZ1 278 aa14.39□□□□□ -0.11
UBAP1-202ENST00000359544 HDDC2Q7Z4H3 204 aa14.39□□□□□ -0.11
UBAP1-202ENST00000359544 B3GNT7Q8NFL0 401 aa14.39□□□□□ -0.11
UBAP1-202ENST00000359544 CLHC1Q8NHS4 586 aa14.39□□□□□ -0.11
UBAP1-202ENST00000359544 SEMA3CQ99985 751 aa14.39□□□□□ -0.11
UBAP1-202ENST00000359544 C17orf62Q9BQA9 187 aa14.39□□□□□ -0.11
UBAP1-202ENST00000359544 ABCC13Q9NSE7 274 aa14.39□□□□□ -0.11
UBAP1-202ENST00000359544 MS4A12Q9NXJ0 267 aa14.39□□□□□ -0.11
UBAP1-202ENST00000359544 HCN4Q9Y3Q4 1203 aa14.39□□□□□ -0.11
UBAP1-202ENST00000359544 SH3D21A4FU49 640 aa14.38□□□□□ -0.11
UBAP1-202ENST00000359544 AKR7A2O43488 359 aa14.38□□□□□ -0.11
UBAP1-202ENST00000359544 PDGFAP04085 211 aa14.38□□□□□ -0.11
UBAP1-202ENST00000359544 SCG5P05408 212 aa14.38□□□□□ -0.11
UBAP1-202ENST00000359544 HAPLN1P10915 354 aaPredicted RBP14.38□□□□□ -0.11
UBAP1-202ENST00000359544 BCKDHAP12694 445 aa14.38□□□□□ -0.11
UBAP1-202ENST00000359544 ALAS2P22557 587 aa14.38□□□□□ -0.11
UBAP1-202ENST00000359544 CHMP24386 653 aa14.38□□□□□ -0.11
UBAP1-202ENST00000359544 PTX3P26022 381 aaPredicted RBP14.38□□□□□ -0.11
UBAP1-202ENST00000359544 ZNF140P52738 457 aaPredicted RBP14.38□□□□□ -0.11
UBAP1-202ENST00000359544 MAB21L1Q13394 359 aa14.38□□□□□ -0.11
UBAP1-202ENST00000359544 LCN1P1Q5VSP4 162 aa14.38□□□□□ -0.11
UBAP1-202ENST00000359544 CNKSR3Q6P9H4 555 aa14.38□□□□□ -0.11
UBAP1-202ENST00000359544 RTN4RL1Q86UN2 441 aaPredicted RBP14.38□□□□□ -0.11
UBAP1-202ENST00000359544 KCNJ9Q92806 393 aa14.38□□□□□ -0.11
UBAP1-202ENST00000359544 PSMG2Q969U7 264 aa14.38□□□□□ -0.11
UBAP1-202ENST00000359544 B3GNT4Q9C0J1 378 aa14.38□□□□□ -0.11
UBAP1-202ENST00000359544 SEC14L4Q9UDX3 406 aa14.38□□□□□ -0.11
UBAP1-202ENST00000359544 PCDHGA2Q9Y5H1 932 aa14.38□□□□□ -0.11
UBAP1-202ENST00000359544 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.38□□□□□ -0.11
UBAP1-202ENST00000359544 FABP12A6NFH5 140 aa14.38□□□□□ -0.11
UBAP1-202ENST00000359544 ZNF670-ZNF695F2Z2N8 137 aa14.38□□□□□ -0.11
UBAP1-202ENST00000359544 FFAR3O14843 346 aa14.38□□□□□ -0.11
UBAP1-202ENST00000359544 GPR42O15529 346 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms