RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 RNF6Q9Y252 685 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 PADI2Q9Y2J8 665 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 PCDHGB3Q9Y5G1 929 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 WASH3PC4AMC7 463 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 TNFRSF11BO00300 401 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 CCL16O15467 120 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 MRPS14O60783 128 aaKnown RBP8.27□□□□□ -1.09
RFX3-202ENST00000358730 ATP6V1G1O75348 118 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 VIPP01282 170 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 GBAP04062 536 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 ETFAP13804 333 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 IDSP22304 550 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 XPAP23025 273 aaPredicted RBP8.27□□□□□ -1.09
RFX3-202ENST00000358730 GRK3P35626 688 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 TGFBR1P36897 503 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 TGFBR2P37173 567 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 CCR2P41597 374 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 ARSIQ5FYB1 569 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 CAMKMTQ7Z624 323 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 FAM124AQ86V42 546 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 BTN2A2Q8WVV5 523 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 SORCS1Q8WY21 1168 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 HRASLS5Q96KN8 279 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 CAPNS2Q96L46 248 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 FOPNLQ96NB1 174 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 DEFB118Q96PH6 123 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 NEURL2Q9BR09 285 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 COPS4Q9BT78 406 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 MROQ9BYG7 248 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 FBXO8Q9NRD0 319 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 HCFC1R1Q9NWW0 138 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 PNMA8BQ9ULN7 279 aaPredicted RBP8.27□□□□□ -1.09
RFX3-202ENST00000358730 LYVE1Q9Y5Y7 322 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 KRBA1A5PL33 1030 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 TTC34A8MYJ7 566 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 EFCAB9A8MZ26 197 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 RNASET2O00584 256 aaKnown RBP8.26□□□□□ -1.09
RFX3-202ENST00000358730 ADAMDEC1O15204 470 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 DPM1O60762 260 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 GNRH1P01148 92 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 TYRP14679 529 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 PRLHRP49683 370 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 CLK1P49759 484 aaKnown RBP8.26□□□□□ -1.09
RFX3-202ENST00000358730 TBPL1P62380 186 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 SPIBQ01892 262 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 FPGSQ05932 587 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 ZNF763Q0D2J5 394 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 SYT16Q17RD7 645 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 ZNF385BQ569K4 471 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 COX20Q5RI15 118 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 MED27Q6P2C8 311 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 ZNF852Q6ZMS4 543 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 TRIM74Q86UV6 250 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 TRIM73Q86UV7 250 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 ADIPOR2Q86V24 386 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 SYTL1Q8IYJ3 562 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 ZBTB8BQ8NAP8 495 aaPredicted RBP8.26□□□□□ -1.09
RFX3-202ENST00000358730 OR10G2Q8NGC3 310 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 OR6Q1Q8NGQ2 317 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 OR56A3Q8NH54 315 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 PHF10Q8WUB8 498 aaKnown RBP8.26□□□□□ -1.09
RFX3-202ENST00000358730 CHTF18Q8WVB6 975 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 PROX1Q92786 737 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 GLYATL1Q969I3 302 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 LGALS12Q96DT0 336 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 ZHX1-C8orf76Q96EF9 292 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 SAMD11Q96NU1 681 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 SIGLEC11Q96RL6 698 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 FEVQ99581 238 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 BTBD2Q9BX70 525 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 ITPAQ9BY32 194 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 EPS8L2Q9H6S3 715 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 RC3H2Q9HBD1 1191 aaKnown RBP8.26□□□□□ -1.09
RFX3-202ENST00000358730 NDUFAF4Q9P032 175 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 ACSL6Q9UKU0 697 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 MAPRE3Q9UPY8 281 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 KCNE2Q9Y6J6 123 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 TMEM229AB2RXF0 380 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 GCM2O75603 506 aaPredicted RBP8.26□□□□□ -1.09
RFX3-202ENST00000358730 SERPINB7O75635 380 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 HLA-EP13747 358 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 PDHA2P29803 388 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 OR1E2P47887 323 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 IDH2P48735 452 aaKnown RBP8.26□□□□□ -1.09
RFX3-202ENST00000358730 CDH12P55289 794 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 SELENOWP63302 87 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 HBA1P69905 142 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 TLE2Q04725 743 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 ELP6Q0PNE2 266 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 PPIGQ13427 754 aaKnown RBP eCLIP8.26□□□□□ -1.09
RFX3-202ENST00000358730 MAPK11Q15759 364 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 HIST2H2ACQ16777 129 aaPredicted RBP8.26□□□□□ -1.09
RFX3-202ENST00000358730 TRIM60Q495X7 471 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 GCNT6Q5T4J0 391 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 TMEM215Q68D42 235 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 OTOP2Q7RTS6 562 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 OR52J3Q8NH60 311 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 COQ8BQ96D53 544 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 SLC35A5Q9BS91 424 aa8.26□□□□□ -1.09
RFX3-202ENST00000358730 SLIRPQ9GZT3 109 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms