RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.89□□□□□ -1.479e-7■■■■□ 26.6
VPS13B-203ENST00000358544 C18orf25Q96B23 403 aaPredicted RBP5.89□□□□□ -1.47
VPS13B-203ENST00000358544 DUSP26Q9BV47 211 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 NANOGQ9H9S0 305 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 PPP4R1LQ9P1A2 415 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 SPO11Q9Y5K1 396 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 hCG_1807616A0A1W2PRN6 198 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 C7orf72A4D263 438 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 FAAHO00519 579 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 JUNBP17275 347 aaPredicted RBP5.89□□□□□ -1.47
VPS13B-203ENST00000358544 L1CAMP32004 1257 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 SEC23BQ15437 767 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 TCEAL5Q5H9L2 206 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 TCEAL6Q6IPX3 200 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 ESX1Q8N693 406 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 POMGNT2Q8NAT1 580 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 FAM46DQ8NEK8 389 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 OR2M2Q96R28 347 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 PRKAG2Q9UGJ0 569 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 AGO1Q9UL18 857 aaKnown RBP5.89□□□□□ -1.47
VPS13B-203ENST00000358544 ERVW-1Q9UQF0 538 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 PCDHGB2Q9Y5G2 931 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 E7EQ34 232 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 GOSR2O14653 212 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 OR6A2O95222 327 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 G6PDP11413 515 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 HTR7P34969 479 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 ASPAP45381 313 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 RPS14P62263 151 aaKnown RBP5.89□□□□□ -1.47
VPS13B-203ENST00000358544 MFSD10Q14728 455 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 ZNF674Q2M3X9 581 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 TMED4Q7Z7H5 227 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 NATD1Q8N6N6 113 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 TERB2Q8NHR7 220 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 RPLP0P6Q8NHW5 317 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 GPR151Q8TDV0 419 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 LRCH3Q96II8 777 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 AKIP1Q9NQ31 210 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 PPRC1Q5VV67 1664 aaKnown RBP5.89□□□□□ -1.47
VPS13B-203ENST00000358544 NAP1L6A6NFF2 107 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 KRBOX1C9JBD0 128 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 UBBP0CG47 229 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 UBCP0CG48 685 aaKnown RBP5.89□□□□□ -1.47
VPS13B-203ENST00000358544 INSRRP14616 1297 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 OXTRP30559 389 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 RPS27AP62979 156 aaKnown RBP5.89□□□□□ -1.47
VPS13B-203ENST00000358544 UBA52P62987 128 aaKnown RBP5.89□□□□□ -1.47
VPS13B-203ENST00000358544 HES5Q5TA89 166 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 NRARPQ7Z6K4 114 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 DENND1CQ8IV53 801 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 RBPMSQ93062 196 aaKnown RBP5.89□□□□□ -1.47
VPS13B-203ENST00000358544 RNF31Q96EP0 1072 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 FCRL1Q96LA6 429 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 ZNF382Q96SR6 550 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 DPH2Q9BQC3 489 aaPredicted RBP5.89□□□□□ -1.47
VPS13B-203ENST00000358544 DTLQ9NZJ0 730 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 ZNF214Q9UL59 606 aaPredicted RBP5.89□□□□□ -1.47
VPS13B-203ENST00000358544 FARSAQ9Y285 508 aaKnown RBP5.89□□□□□ -1.47
VPS13B-203ENST00000358544 CLDN9O95484 217 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 ALAS2P22557 587 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 S100PP25815 95 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 PRKAG1P54619 331 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 EMX1Q04741 257 aaPredicted RBP5.89□□□□□ -1.47
VPS13B-203ENST00000358544 CCDC3Q9BQI4 270 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 BRINP2Q9C0B6 783 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 RETREG1Q9H6L5 497 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 NOP16Q9Y3C1 178 aaKnown RBP5.89□□□□□ -1.47
VPS13B-203ENST00000358544 PTCH2Q9Y6C5 1203 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 MYOFQ9NZM1 2061 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 GLYATL1P3A0A0U1RQE8 302 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 SOX14O95416 240 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 SMSP52788 366 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 GBX2P52951 348 aaPredicted RBP5.89□□□□□ -1.47
VPS13B-203ENST00000358544 ARF3P61204 181 aaPredicted RBP5.89□□□□□ -1.47
VPS13B-203ENST00000358544 ARF1P84077 181 aaKnown RBP5.89□□□□□ -1.47
VPS13B-203ENST00000358544 SLC3A1Q07837 685 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 SF3A2Q15428 464 aaKnown RBP5.89□□□□□ -1.47
VPS13B-203ENST00000358544 CES5AQ6NT32 575 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 PGM2L1Q6PCE3 622 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 GRAMD2AQ8IUY3 354 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 CRYBG2Q8N1P7 616 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 TMEM102Q8N9M5 508 aaPredicted RBP5.89□□□□□ -1.47
VPS13B-203ENST00000358544 C2CD4AQ8NCU7 369 aaPredicted RBP5.89□□□□□ -1.47
VPS13B-203ENST00000358544 REPS2Q8NFH8 660 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 FATE1Q969F0 183 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 PKP4Q99569 1192 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 B3GNT5Q9BYG0 378 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 A0A1W2PPL8 197 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 NME4O00746 187 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 TUBG1P23258 451 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 EPHX2P34913 555 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 GGT2P36268 569 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 ASAH1Q13510 395 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 AADACL4Q5VUY2 407 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 WDR48Q8TAF3 677 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 SGTBQ96EQ0 304 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 MGLLQ99685 303 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 AARSD1Q9BTE6 412 aaKnown RBP5.89□□□□□ -1.47
VPS13B-203ENST00000358544 BORCS7-ASMTA0A0B4J1R7 106 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 TEX13CA0A0J9YWL9 993 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms