RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 ARRDC5A6NEK1 342 aa17.06■□□□□ 0.32
RTN4-204ENST00000357732 EFCAB10A6NFE3 127 aa17.06■□□□□ 0.32
RTN4-204ENST00000357732 KCNK2O95069 426 aa17.06■□□□□ 0.32
RTN4-204ENST00000357732 DBTP11182 482 aaKnown RBP17.06■□□□□ 0.32
RTN4-204ENST00000357732 PNLIPRP1P54315 467 aa17.06■□□□□ 0.32
RTN4-204ENST00000357732 GPNMBQ14956 572 aa17.06■□□□□ 0.32
RTN4-204ENST00000357732 SPANXN2Q5MJ10 180 aa17.06■□□□□ 0.32
RTN4-204ENST00000357732 LRRC66Q68CR7 880 aa17.06■□□□□ 0.32
RTN4-204ENST00000357732 TSPAN33Q86UF1 283 aa17.06■□□□□ 0.32
RTN4-204ENST00000357732 SLC22A15Q8IZD6 547 aa17.06■□□□□ 0.32
RTN4-204ENST00000357732 GOT1L1Q8NHS2 421 aaPredicted RBP17.06■□□□□ 0.32
RTN4-204ENST00000357732 SKA2Q8WVK7 121 aaPredicted RBP17.06■□□□□ 0.32
RTN4-204ENST00000357732 CLP1Q92989 425 aaKnown RBP17.06■□□□□ 0.32
RTN4-204ENST00000357732 SH3KBP1Q96B97 665 aa17.06■□□□□ 0.32
RTN4-204ENST00000357732 P2RY13Q9BPV8 354 aa17.06■□□□□ 0.32
RTN4-204ENST00000357732 LRFN2Q9ULH4 789 aa17.06■□□□□ 0.32
RTN4-204ENST00000357732 A0A1W2PQ67 120 aa17.06■□□□□ 0.32
RTN4-204ENST00000357732 TMEM229AB2RXF0 380 aa17.06■□□□□ 0.32
RTN4-204ENST00000357732 GREM1O60565 184 aa17.06■□□□□ 0.32
RTN4-204ENST00000357732 PARNO95453 639 aaKnown RBP17.06■□□□□ 0.32
RTN4-204ENST00000357732 EFEMP2O95967 443 aa17.06■□□□□ 0.32
RTN4-204ENST00000357732 VIPP01282 170 aa17.06■□□□□ 0.32
RTN4-204ENST00000357732 ATP1B2P14415 290 aaPredicted RBP17.06■□□□□ 0.32
RTN4-204ENST00000357732 FCHO2Q0JRZ9 810 aa17.06■□□□□ 0.32
RTN4-204ENST00000357732 LRIT3Q3SXY7 679 aa17.06■□□□□ 0.32
RTN4-204ENST00000357732 ARMCX4Q5H9R4 360 aa17.06■□□□□ 0.32
RTN4-204ENST00000357732 C1QTNF12Q5T7M4 302 aa17.06■□□□□ 0.32
RTN4-204ENST00000357732 CCDC80Q76M96 950 aa17.06■□□□□ 0.32
RTN4-204ENST00000357732 CCDC103Q8IW40 242 aa17.06■□□□□ 0.32
RTN4-204ENST00000357732 APCDD1Q8J025 514 aa17.06■□□□□ 0.32
RTN4-204ENST00000357732 ZNF461Q8TAF7 563 aa17.06■□□□□ 0.32
RTN4-204ENST00000357732 WFDC5Q8TCV5 224 aa17.06■□□□□ 0.32
RTN4-204ENST00000357732 BHLHE41Q9C0J9 482 aaPredicted RBP17.06■□□□□ 0.32
RTN4-204ENST00000357732 RACGAP1Q9H0H5 632 aa17.06■□□□□ 0.32
RTN4-204ENST00000357732 ZNF556Q9HAH1 456 aa17.06■□□□□ 0.32
RTN4-204ENST00000357732 PCDHGB6Q9Y5F9 930 aa17.06■□□□□ 0.32
RTN4-204ENST00000357732 A0A075B6Q4 140 aa17.05■□□□□ 0.32
RTN4-204ENST00000357732 TBKBP1A7MCY6 615 aa17.05■□□□□ 0.32
RTN4-204ENST00000357732 ABLIM3O94929 683 aa17.05■□□□□ 0.32
RTN4-204ENST00000357732 AP2A2O94973 939 aa17.05■□□□□ 0.32
RTN4-204ENST00000357732 SNRPD1P62314 119 aaKnown RBP17.05■□□□□ 0.32
RTN4-204ENST00000357732 TCTN1Q2MV58 587 aa17.05■□□□□ 0.32
RTN4-204ENST00000357732 METTL4Q8N3J2 472 aa17.05■□□□□ 0.32
RTN4-204ENST00000357732 SLC5A8Q8N695 610 aa17.05■□□□□ 0.32
RTN4-204ENST00000357732 FLCNQ8NFG4 579 aa17.05■□□□□ 0.32
RTN4-204ENST00000357732 SPPL2AQ8TCT8 520 aa17.05■□□□□ 0.32
RTN4-204ENST00000357732 BHMTQ93088 406 aa17.05■□□□□ 0.32
RTN4-204ENST00000357732 MAPKAP1Q9BPZ7 522 aa17.05■□□□□ 0.32
RTN4-204ENST00000357732 SIAEQ9HAT2 523 aa17.05■□□□□ 0.32
RTN4-204ENST00000357732 CRNNQ9UBG3 495 aaPredicted RBP17.05■□□□□ 0.32
RTN4-204ENST00000357732 ZNF232Q9UNY5 417 aa17.05■□□□□ 0.32
RTN4-204ENST00000357732 TRAPPC4Q9Y296 219 aa17.05■□□□□ 0.32
RTN4-204ENST00000357732 ANAPC1Q9H1A4 1944 aa17.05■□□□□ 0.32
RTN4-204ENST00000357732 CASP8AP2Q9UKL3 1982 aa17.05■□□□□ 0.32
RTN4-204ENST00000357732 GABRR3A8MPY1 467 aa17.04■□□□□ 0.32
RTN4-204ENST00000357732 RGS13O14921 159 aa17.04■□□□□ 0.32
RTN4-204ENST00000357732 TLL1O43897 1013 aa17.04■□□□□ 0.32
RTN4-204ENST00000357732 IFNA14P01570 189 aa17.04■□□□□ 0.32
RTN4-204ENST00000357732 GSTM1P09488 218 aa17.04■□□□□ 0.32
RTN4-204ENST00000357732 ITPKAP23677 461 aa17.04■□□□□ 0.32
RTN4-204ENST00000357732 MAPK9P45984 424 aa17.04■□□□□ 0.32
RTN4-204ENST00000357732 FPGSQ05932 587 aa17.04■□□□□ 0.32
RTN4-204ENST00000357732 PLD1Q13393 1074 aa17.04■□□□□ 0.32
RTN4-204ENST00000357732 XKR6Q5GH73 641 aa17.04■□□□□ 0.32
RTN4-204ENST00000357732 TSEN54Q7Z6J9 526 aaKnown RBP17.04■□□□□ 0.32
RTN4-204ENST00000357732 SETD6Q8TBK2 473 aa17.04■□□□□ 0.32
RTN4-204ENST00000357732 TMEM38AQ9H6F2 299 aa17.04■□□□□ 0.32
RTN4-204ENST00000357732 IMPAD1Q9NX62 359 aa17.04■□□□□ 0.32
RTN4-204ENST00000357732 ZNF226Q9NYT6 803 aa17.04■□□□□ 0.32
RTN4-204ENST00000357732 QSOX1O00391 747 aa17.04■□□□□ 0.32
RTN4-204ENST00000357732 YY2O15391 372 aa17.04■□□□□ 0.32
RTN4-204ENST00000357732 ZNF821O75541 412 aaPredicted RBP17.04■□□□□ 0.32
RTN4-204ENST00000357732 C1QCP02747 245 aa17.04■□□□□ 0.32
RTN4-204ENST00000357732 PIK3CBP42338 1070 aa17.04■□□□□ 0.32
RTN4-204ENST00000357732 CASP3P42574 277 aa17.04■□□□□ 0.32
RTN4-204ENST00000357732 HMGA2P52926 109 aa17.04■□□□□ 0.32
RTN4-204ENST00000357732 CDC42P60953 191 aa17.04■□□□□ 0.32
RTN4-204ENST00000357732 PTSQ03393 145 aa17.04■□□□□ 0.32
RTN4-204ENST00000357732 ST3GAL4Q11206 333 aa17.04■□□□□ 0.32
RTN4-204ENST00000357732 CCDC190Q86UF4 302 aa17.04■□□□□ 0.32
RTN4-204ENST00000357732 ASZ1Q8WWH4 475 aa17.04■□□□□ 0.32
RTN4-204ENST00000357732 C3orf14Q9HBI5 128 aa17.04■□□□□ 0.32
RTN4-204ENST00000357732 YIPF1Q9Y548 306 aa17.04■□□□□ 0.32
RTN4-204ENST00000357732 A0A1W2PQ45 241 aaPredicted RBP17.03■□□□□ 0.32
RTN4-204ENST00000357732 A0A1W2PQY0 241 aa17.03■□□□□ 0.32
RTN4-204ENST00000357732 OLFM2O95897 454 aa17.03■□□□□ 0.32
RTN4-204ENST00000357732 PIPP12273 146 aaPredicted RBP17.03■□□□□ 0.32
RTN4-204ENST00000357732 SELPP16109 830 aa17.03■□□□□ 0.32
RTN4-204ENST00000357732 CD22P20273 847 aa17.03■□□□□ 0.32
RTN4-204ENST00000357732 IDSP22304 550 aa17.03■□□□□ 0.32
RTN4-204ENST00000357732 GKP32189 559 aa17.03■□□□□ 0.32
RTN4-204ENST00000357732 RPL3P39023 403 aaKnown RBP17.03■□□□□ 0.32
RTN4-204ENST00000357732 SEPHS1P49903 392 aa17.03■□□□□ 0.32
RTN4-204ENST00000357732 DESI1Q6ICB0 168 aa17.03■□□□□ 0.32
RTN4-204ENST00000357732 THOC6Q86W42 341 aaKnown RBP17.03■□□□□ 0.32
RTN4-204ENST00000357732 LGI4Q8N135 537 aa17.03■□□□□ 0.32
RTN4-204ENST00000357732 CPXM2Q8N436 756 aa17.03■□□□□ 0.32
RTN4-204ENST00000357732 SLX1AQ9BQ83 275 aa17.03■□□□□ 0.32
RTN4-204ENST00000357732 EMILIN2Q9BXX0 1053 aa17.03■□□□□ 0.32
RTN4-204ENST00000357732 CPEB1Q9BZB8 566 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms