RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 KCNK13Q9HB14 408 aa8.81□□□□□ -1
UPF2-202ENST00000357604 NPHS2Q9NP85 383 aa8.81□□□□□ -1
UPF2-202ENST00000357604 RYDENQ9NUL5 291 aaKnown RBP8.81□□□□□ -1
UPF2-202ENST00000357604 CALML5Q9NZT1 146 aa8.81□□□□□ -1
UPF2-202ENST00000357604 A0A1W2PPM1 405 aa8.8□□□□□ -1
UPF2-202ENST00000357604 SEMA3DO95025 777 aa8.8□□□□□ -1
UPF2-202ENST00000357604 CYC1P08574 325 aa8.8□□□□□ -1
UPF2-202ENST00000357604 SLC35E2BP0CK96 405 aa8.8□□□□□ -1
UPF2-202ENST00000357604 RAB38P57729 211 aa8.8□□□□□ -1
UPF2-202ENST00000357604 RPS13P62277 151 aaKnown RBP8.8□□□□□ -1
UPF2-202ENST00000357604 KHDRBS2Q5VWX1 349 aaKnown RBP8.8□□□□□ -1
UPF2-202ENST00000357604 IKBIPQ70UQ0 350 aa8.8□□□□□ -1
UPF2-202ENST00000357604 RNF217Q8TC41 542 aa8.8□□□□□ -1
UPF2-202ENST00000357604 LKAAEAR1Q8TD35 194 aa8.8□□□□□ -1
UPF2-202ENST00000357604 KLHL6Q8WZ60 621 aa8.8□□□□□ -1
UPF2-202ENST00000357604 SDCCAG3Q96C92 435 aa8.8□□□□□ -1
UPF2-202ENST00000357604 METTL2AQ96IZ6 378 aaKnown RBP8.8□□□□□ -1
UPF2-202ENST00000357604 POLR3HQ9Y535 204 aaPredicted RBP8.8□□□□□ -1
UPF2-202ENST00000357604 MATN4O95460 622 aa8.8□□□□□ -1
UPF2-202ENST00000357604 LINC00032P0C843 101 aa8.8□□□□□ -1
UPF2-202ENST00000357604 KHKP50053 298 aa8.8□□□□□ -1
UPF2-202ENST00000357604 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.8□□□□□ -1
UPF2-202ENST00000357604 GGTA1PQ4G0N0 100 aa8.8□□□□□ -1
UPF2-202ENST00000357604 PLA2G2CQ5R387 149 aa8.8□□□□□ -1
UPF2-202ENST00000357604 FAM83HQ6ZRV2 1179 aaPredicted RBP8.8□□□□□ -1
UPF2-202ENST00000357604 SLC30A8Q8IWU4 369 aa8.8□□□□□ -1
UPF2-202ENST00000357604 ZNF480Q8WV37 535 aa8.8□□□□□ -1
UPF2-202ENST00000357604 POP5Q969H6 163 aaKnown RBP8.8□□□□□ -1
UPF2-202ENST00000357604 GPR87Q9BY21 358 aa8.8□□□□□ -1
UPF2-202ENST00000357604 PSAT1Q9Y617 370 aa8.8□□□□□ -1
UPF2-202ENST00000357604 USH1CQ9Y6N9 552 aa8.8□□□□□ -1
UPF2-202ENST00000357604 H0YIG0 161 aa8.8□□□□□ -1
UPF2-202ENST00000357604 SH3BGRLO75368 114 aa8.8□□□□□ -1
UPF2-202ENST00000357604 THRAP10827 490 aa8.8□□□□□ -1
UPF2-202ENST00000357604 ESRRAP11474 423 aaPredicted RBP8.8□□□□□ -1
UPF2-202ENST00000357604 CCKBRP32239 447 aa8.8□□□□□ -1
UPF2-202ENST00000357604 UBE2IP63279 158 aaKnown RBP8.8□□□□□ -1
UPF2-202ENST00000357604 ISXQ2M1V0 245 aa8.8□□□□□ -1
UPF2-202ENST00000357604 ZNF595Q8IYB9 648 aa8.8□□□□□ -1
UPF2-202ENST00000357604 GLB1L3Q8NCI6 653 aaPredicted RBP8.8□□□□□ -1
UPF2-202ENST00000357604 OR4F6Q8NGB9 312 aa8.8□□□□□ -1
UPF2-202ENST00000357604 OR4K14Q8NGD5 310 aa8.8□□□□□ -1
UPF2-202ENST00000357604 ZNF483Q8TF39 744 aaPredicted RBP8.8□□□□□ -1
UPF2-202ENST00000357604 ZNF75CPQ92670 426 aaPredicted RBP8.8□□□□□ -1
UPF2-202ENST00000357604 LPAR4Q99677 370 aa8.8□□□□□ -1
UPF2-202ENST00000357604 DEFB126Q9BYW3 111 aa8.8□□□□□ -1
UPF2-202ENST00000357604 DCTN4Q9UJW0 460 aa8.8□□□□□ -1
UPF2-202ENST00000357604 C15orf38-AP3S2A0A0A6YYH1 394 aa8.8□□□□□ -1
UPF2-202ENST00000357604 C21orf140B9A014 251 aa8.8□□□□□ -1
UPF2-202ENST00000357604 ACOT7O00154 380 aa8.8□□□□□ -1
UPF2-202ENST00000357604 SPINT1O43278 529 aa8.8□□□□□ -1
UPF2-202ENST00000357604 NOBOXO60393 691 aa8.8□□□□□ -1
UPF2-202ENST00000357604 ABHD17BQ5VST6 288 aa8.8□□□□□ -1
UPF2-202ENST00000357604 ARPINQ7Z6K5 226 aa8.8□□□□□ -1
UPF2-202ENST00000357604 CYP4Z1Q86W10 505 aa8.8□□□□□ -1
UPF2-202ENST00000357604 PRSS58Q8IYP2 241 aa8.8□□□□□ -1
UPF2-202ENST00000357604 ZADH2Q8N4Q0 377 aa8.8□□□□□ -1
UPF2-202ENST00000357604 OR14A16Q8NHC5 309 aa8.8□□□□□ -1
UPF2-202ENST00000357604 GBP5Q96PP8 586 aa8.8□□□□□ -1
UPF2-202ENST00000357604 NRSN2Q9GZP1 204 aa8.8□□□□□ -1
UPF2-202ENST00000357604 MARCOQ9UEW3 520 aaPredicted RBP8.8□□□□□ -1
UPF2-202ENST00000357604 BTRCQ9Y297 605 aa8.8□□□□□ -1
UPF2-202ENST00000357604 NFS1Q9Y697 457 aa8.8□□□□□ -1
UPF2-202ENST00000357604 PPM1DO15297 605 aa8.79□□□□□ -1
UPF2-202ENST00000357604 PSMA3P25788 255 aa8.79□□□□□ -1
UPF2-202ENST00000357604 EMP3P54852 163 aa8.79□□□□□ -1
UPF2-202ENST00000357604 RBPJQ06330 500 aa8.79□□□□□ -1
UPF2-202ENST00000357604 TOMM20Q15388 145 aa8.79□□□□□ -1
UPF2-202ENST00000357604 PDSS1Q5T2R2 415 aa8.79□□□□□ -1
UPF2-202ENST00000357604 ERMP1Q7Z2K6 904 aa8.79□□□□□ -1
UPF2-202ENST00000357604 C16orf62Q7Z3J2 963 aa8.79□□□□□ -1
UPF2-202ENST00000357604 ZNF687Q8N1G0 1237 aa8.79□□□□□ -1
UPF2-202ENST00000357604 TMEM156Q8N614 296 aa8.79□□□□□ -1
UPF2-202ENST00000357604 ZNF527Q8NB42 609 aa8.79□□□□□ -1
UPF2-202ENST00000357604 STMN2Q93045 179 aa8.79□□□□□ -1
UPF2-202ENST00000357604 PTCHD1Q96NR3 888 aa8.79□□□□□ -1
UPF2-202ENST00000357604 FBXO8Q9NRD0 319 aa8.79□□□□□ -1
UPF2-202ENST00000357604 ARL2BPQ9Y2Y0 163 aa8.79□□□□□ -1
UPF2-202ENST00000357604 DENND4AQ7Z401 1863 aa8.79□□□□□ -1
UPF2-202ENST00000357604 FEZF1A0PJY2 475 aa8.79□□□□□ -1
UPF2-202ENST00000357604 GFYI3L273 518 aa8.79□□□□□ -1
UPF2-202ENST00000357604 ZNF749O43361 778 aa8.79□□□□□ -1
UPF2-202ENST00000357604 PROM1O43490 865 aa8.79□□□□□ -1
UPF2-202ENST00000357604 PDE9AO76083 593 aa8.79□□□□□ -1
UPF2-202ENST00000357604 SLITRK5O94991 958 aa8.79□□□□□ -1
UPF2-202ENST00000357604 H2AFXP16104 143 aaPredicted RBP8.79□□□□□ -1
UPF2-202ENST00000357604 NELFEP18615 380 aaKnown RBP8.79□□□□□ -1
UPF2-202ENST00000357604 MAGP20916 626 aa8.79□□□□□ -1
UPF2-202ENST00000357604 ACADVLP49748 655 aa8.79□□□□□ -1
UPF2-202ENST00000357604 ARFIP1P53367 373 aa8.79□□□□□ -1
UPF2-202ENST00000357604 OR4D1Q15615 310 aa8.79□□□□□ -1
UPF2-202ENST00000357604 PROX2Q3B8N5 592 aa8.79□□□□□ -1
UPF2-202ENST00000357604 KRT73Q86Y46 540 aa8.79□□□□□ -1
UPF2-202ENST00000357604 GALNT6Q8NCL4 622 aa8.79□□□□□ -1
UPF2-202ENST00000357604 HMGCLL1Q8TB92 370 aa8.79□□□□□ -1
UPF2-202ENST00000357604 ATP13A2Q9NQ11 1180 aa8.79□□□□□ -1
UPF2-202ENST00000357604 C2orf42Q9NWW7 574 aa8.79□□□□□ -1
UPF2-202ENST00000357604 ZNF232Q9UNY5 417 aa8.79□□□□□ -1
UPF2-202ENST00000357604 H0YGG7 62 aa8.79□□□□□ -1
UPF2-202ENST00000357604 TK2O00142 265 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms