RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 PRPSAP1Q14558 356 aa10.59□□□□□ -0.71
RTN3-204ENST00000354497 BTBD16Q32M84 506 aa10.59□□□□□ -0.71
RTN3-204ENST00000354497 SPINK14Q6IE38 97 aa10.59□□□□□ -0.71
RTN3-204ENST00000354497 TMEM154Q6P9G4 183 aa10.59□□□□□ -0.71
RTN3-204ENST00000354497 TUBA3EQ6PEY2 450 aa10.59□□□□□ -0.71
RTN3-204ENST00000354497 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.59□□□□□ -0.71
RTN3-204ENST00000354497 OR4N4Q8N0Y3 316 aa10.59□□□□□ -0.71
RTN3-204ENST00000354497 OR2L8Q8NGY9 312 aa10.59□□□□□ -0.71
RTN3-204ENST00000354497 MMABQ96EY8 250 aaPredicted RBP10.59□□□□□ -0.71
RTN3-204ENST00000354497 ZNF354BQ96LW1 612 aa10.59□□□□□ -0.71
RTN3-204ENST00000354497 C10orf90Q96M02 699 aa10.59□□□□□ -0.71
RTN3-204ENST00000354497 ZNF285Q96NJ3 590 aa10.59□□□□□ -0.71
RTN3-204ENST00000354497 QKIQ96PU8 341 aaKnown RBP eCLIP10.59□□□□□ -0.711e-6■■■□□ 15.5
RTN3-204ENST00000354497 RAB3IPQ96QF0 476 aaPredicted RBP10.59□□□□□ -0.71
RTN3-204ENST00000354497 DMRTA2Q96SC8 542 aa10.59□□□□□ -0.71
RTN3-204ENST00000354497 UTP23Q9BRU9 249 aaKnown RBP10.59□□□□□ -0.71
RTN3-204ENST00000354497 REPIN1Q9BWE0 567 aaKnown RBP10.59□□□□□ -0.71
RTN3-204ENST00000354497 UCK2Q9BZX2 261 aa10.59□□□□□ -0.71
RTN3-204ENST00000354497 RAB17Q9H0T7 212 aa10.59□□□□□ -0.71
RTN3-204ENST00000354497 RNPEPL1Q9HAU8 725 aa10.59□□□□□ -0.71
RTN3-204ENST00000354497 KCNK13Q9HB14 408 aa10.59□□□□□ -0.71
RTN3-204ENST00000354497 TIMMDC1Q9NPL8 285 aa10.59□□□□□ -0.71
RTN3-204ENST00000354497 DDX56Q9NY93 547 aaKnown RBP10.59□□□□□ -0.71
RTN3-204ENST00000354497 MKL2Q9ULH7 1088 aa10.59□□□□□ -0.71
RTN3-204ENST00000354497 TTC7AQ9ULT0 858 aaPredicted RBP10.59□□□□□ -0.71
RTN3-204ENST00000354497 CDC14AQ9UNH5 594 aa10.59□□□□□ -0.71
RTN3-204ENST00000354497 HYOU1Q9Y4L1 999 aa10.59□□□□□ -0.71
RTN3-204ENST00000354497 NIPBLQ6KC79 2804 aaeCLIP10.59□□□□□ -0.71
RTN3-204ENST00000354497 CNTRLQ7Z7A1 2325 aa10.59□□□□□ -0.71
RTN3-204ENST00000354497 TRBV5-4A0A0C4DH59 114 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 A0A1B0GTH6 734 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 H7C0C1 242 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 ADAM10O14672 748 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 NRP2O60462 931 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 ATP5HO75947 161 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 RPN2P04844 631 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 TPOP07202 933 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 OR56A5P0C7T3 313 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 PSMB4P28070 264 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 ADRA1AP35348 466 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 ATP5OP48047 213 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 COPS2P61201 443 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 GUCY1A3Q02108 690 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 LTBQ06643 244 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 NR1I3Q14994 352 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 SYT16Q17RD7 645 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 SPRED3Q2MJR0 410 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 SPDYAQ5MJ70 313 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 ACER2Q5QJU3 275 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 RANBP10Q6VN20 620 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 GALNTL5Q7Z4T8 443 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 CD163Q86VB7 1156 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 PIANPQ8IYJ0 282 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 TMEM178AQ8NBL3 297 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 ASB5Q8WWX0 329 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 METTL21AQ8WXB1 218 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 FRMD6Q96NE9 622 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 ZIM3Q96PE6 472 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 TBL1YQ9BQ87 522 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 DNAJB12Q9NXW2 375 aaKnown RBP10.58□□□□□ -0.72
RTN3-204ENST00000354497 RABL2BQ9UNT1 228 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 AAR2Q9Y312 384 aaKnown RBP10.58□□□□□ -0.72
RTN3-204ENST00000354497 ANKHD1Q8IWZ3 2542 aaKnown RBP10.58□□□□□ -0.72
RTN3-204ENST00000354497 CPAMD8Q8IZJ3 1885 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 IGLV3-12A0A075B6K2 115 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 SMIM31A0A1B0GVY4 71 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 A0A1W2PQ72 361 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 SPOPO43791 374 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 C8orf89P0DMQ9 161 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 RBL1P28749 1068 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 PTGER1P34995 402 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 CD96P40200 585 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 CDKN2BP42772 138 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 MTTPP55157 894 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 HSPA14Q0VDF9 509 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 TAZQ16635 292 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 TMEM53Q6P2H8 277 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 TTC23LQ6PF05 361 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 RAD9BQ6WBX8 426 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 ASRGL1Q7L266 308 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 CRLF3Q8IUI8 442 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 CROCCP3Q8IVE0 287 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 DCUN1D3Q8IWE4 304 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 DMRTC2Q8IXT2 367 aaPredicted RBP10.58□□□□□ -0.72
RTN3-204ENST00000354497 MDS2Q8NDY4 140 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 SLC35G2Q8TBE7 412 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 SYN2Q92777 582 aaPredicted RBP10.58□□□□□ -0.72
RTN3-204ENST00000354497 ZUFSPQ96AP4 578 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 TMEM237Q96Q45 408 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 TRIM51Q9BSJ1 452 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 CXXC4Q9H2H0 198 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 CLK4Q9HAZ1 481 aaKnown RBP10.58□□□□□ -0.72
RTN3-204ENST00000354497 KCNJ16Q9NPI9 418 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 MKKSQ9NPJ1 570 aaPredicted RBP10.58□□□□□ -0.72
RTN3-204ENST00000354497 FAM114A2Q9NRY5 505 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 FAIMQ9NVQ4 179 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 KCNN3Q9UGI6 736 aa10.58□□□□□ -0.72
RTN3-204ENST00000354497 CACNA1CQ13936 2221 aa10.57□□□□□ -0.72
RTN3-204ENST00000354497 LOC102723996A0A087X1L8 192 aa10.57□□□□□ -0.72
RTN3-204ENST00000354497 A0A0A6YYC8 382 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms