RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 HOMER3Q9NSC5 361 aa14.88□□□□□ -0.03
DDX55-202ENST00000354291 CATSPERZQ9NTU4 200 aa14.88□□□□□ -0.03
DDX55-202ENST00000354291 BFARQ9NZS9 450 aa14.88□□□□□ -0.03
DDX55-202ENST00000354291 NFS1Q9Y697 457 aa14.88□□□□□ -0.03
DDX55-202ENST00000354291 TLN2Q9Y4G6 2542 aa14.88□□□□□ -0.03
DDX55-202ENST00000354291 PRMT5O14744 637 aaPredicted RBP14.87□□□□□ -0.03
DDX55-202ENST00000354291 C1orf105O95561 183 aa14.87□□□□□ -0.03
DDX55-202ENST00000354291 FGGP02679 453 aa14.87□□□□□ -0.03
DDX55-202ENST00000354291 STATHP02808 62 aa14.87□□□□□ -0.03
DDX55-202ENST00000354291 TPP2P29144 1249 aaPredicted RBP14.87□□□□□ -0.03
DDX55-202ENST00000354291 NPY2RP49146 381 aa14.87□□□□□ -0.03
DDX55-202ENST00000354291 AGTR2P50052 363 aa14.87□□□□□ -0.03
DDX55-202ENST00000354291 NR0B1P51843 470 aaKnown RBP14.87□□□□□ -0.03
DDX55-202ENST00000354291 ITGA8P53708 1063 aa14.87□□□□□ -0.03
DDX55-202ENST00000354291 BASP1P80723 227 aaKnown RBP14.87□□□□□ -0.03
DDX55-202ENST00000354291 NAA25Q14CX7 972 aa14.87□□□□□ -0.03
DDX55-202ENST00000354291 NDUFA9Q16795 377 aa14.87□□□□□ -0.03
DDX55-202ENST00000354291 GXYLT1Q4G148 440 aa14.87□□□□□ -0.03
DDX55-202ENST00000354291 ZNF227Q86WZ6 799 aa14.87□□□□□ -0.03
DDX55-202ENST00000354291 KRT222Q8N1A0 295 aa14.87□□□□□ -0.03
DDX55-202ENST00000354291 OR52N2Q8NGI0 321 aa14.87□□□□□ -0.03
DDX55-202ENST00000354291 OR5M9Q8NGP3 310 aa14.87□□□□□ -0.03
DDX55-202ENST00000354291 OR51Q1Q8NH59 317 aa14.87□□□□□ -0.03
DDX55-202ENST00000354291 HMGCLL1Q8TB92 370 aa14.87□□□□□ -0.03
DDX55-202ENST00000354291 OR2A5Q96R48 311 aa14.87□□□□□ -0.03
DDX55-202ENST00000354291 LPAR4Q99677 370 aa14.87□□□□□ -0.03
DDX55-202ENST00000354291 CRIM1Q9NZV1 1036 aa14.87□□□□□ -0.03
DDX55-202ENST00000354291 HCN3Q9P1Z3 774 aa14.87□□□□□ -0.03
DDX55-202ENST00000354291 RUVBL2Q9Y230 463 aaKnown RBP14.87□□□□□ -0.03
DDX55-202ENST00000354291 FAM171A2A8MVW0 826 aa14.86□□□□□ -0.03
DDX55-202ENST00000354291 NPIPA2E9PIF3 369 aa14.86□□□□□ -0.03
DDX55-202ENST00000354291 NPIPA3F8WFD2 350 aa14.86□□□□□ -0.03
DDX55-202ENST00000354291 KLRC4-KLRK1H3BQV0 150 aa14.86□□□□□ -0.03
DDX55-202ENST00000354291 TXNDC9O14530 226 aa14.86□□□□□ -0.03
DDX55-202ENST00000354291 KPNA5O15131 536 aa14.86□□□□□ -0.03
DDX55-202ENST00000354291 CD3EAPO15446 510 aaKnown RBP14.86□□□□□ -0.03
DDX55-202ENST00000354291 P2RX6O15547 441 aa14.86□□□□□ -0.03
DDX55-202ENST00000354291 NRDCO43847 1150 aa14.86□□□□□ -0.03
DDX55-202ENST00000354291 PEX1O43933 1283 aa14.86□□□□□ -0.03
DDX55-202ENST00000354291 RAF1P04049 648 aa14.86□□□□□ -0.03
DDX55-202ENST00000354291 AOAHP28039 575 aa14.86□□□□□ -0.03
DDX55-202ENST00000354291 HOXC12P31275 282 aa14.86□□□□□ -0.03
DDX55-202ENST00000354291 XCR1P46094 333 aa14.86□□□□□ -0.03
DDX55-202ENST00000354291 ZFP36L2P47974 494 aaKnown RBP14.86□□□□□ -0.03
DDX55-202ENST00000354291 SESN2P58004 480 aaPredicted RBP14.86□□□□□ -0.03
DDX55-202ENST00000354291 SNRPNP63162 240 aaKnown RBP14.86□□□□□ -0.03
DDX55-202ENST00000354291 CDK16Q00536 496 aa14.86□□□□□ -0.03
DDX55-202ENST00000354291 PTK6Q13882 451 aa14.86□□□□□ -0.03
DDX55-202ENST00000354291 FAM53BQ14153 422 aa14.86□□□□□ -0.03
DDX55-202ENST00000354291 SEMA3AQ14563 771 aa14.86□□□□□ -0.03
DDX55-202ENST00000354291 TMED2Q15363 201 aa14.86□□□□□ -0.03
DDX55-202ENST00000354291 NSDHLQ15738 373 aa14.86□□□□□ -0.03
DDX55-202ENST00000354291 FBXW10Q5XX13 1052 aa14.86□□□□□ -0.03
DDX55-202ENST00000354291 SUSD1Q6UWL2 747 aa14.86□□□□□ -0.03
DDX55-202ENST00000354291 PAMR1Q6UXH9 720 aa14.86□□□□□ -0.03
DDX55-202ENST00000354291 PAQR7Q86WK9 346 aa14.86□□□□□ -0.03
DDX55-202ENST00000354291 LIX1LQ8IVB5 337 aa14.86□□□□□ -0.03
DDX55-202ENST00000354291 LRRC8AQ8IWT6 810 aa14.86□□□□□ -0.03
DDX55-202ENST00000354291 MPP5Q8N3R9 675 aa14.86□□□□□ -0.03
DDX55-202ENST00000354291 KIF2BQ8N4N8 673 aa14.86□□□□□ -0.03
DDX55-202ENST00000354291 ARHGEF39Q8N4T4 335 aa14.86□□□□□ -0.03
DDX55-202ENST00000354291 KLF13Q9Y2Y9 288 aaPredicted RBP14.86□□□□□ -0.03
DDX55-202ENST00000354291 A6NNC1 897 aa14.85□□□□□ -0.03
DDX55-202ENST00000354291 CEP104O60308 925 aa14.85□□□□□ -0.03
DDX55-202ENST00000354291 PHF2O75151 1096 aa14.85□□□□□ -0.03
DDX55-202ENST00000354291 CYC1P08574 325 aa14.85□□□□□ -0.03
DDX55-202ENST00000354291 PKMP14618 531 aaKnown RBP14.85□□□□□ -0.03
DDX55-202ENST00000354291 RPA3P35244 121 aaPredicted RBP14.85□□□□□ -0.03
DDX55-202ENST00000354291 PTRHD1Q6GMV3 140 aaKnown RBP14.85□□□□□ -0.03
DDX55-202ENST00000354291 ZNF585AQ6P3V2 769 aa14.85□□□□□ -0.03
DDX55-202ENST00000354291 PRSS41Q7RTY9 318 aa14.85□□□□□ -0.03
DDX55-202ENST00000354291 ADCK2Q7Z695 626 aa14.85□□□□□ -0.03
DDX55-202ENST00000354291 LRRC6Q86X45 466 aa14.85□□□□□ -0.03
DDX55-202ENST00000354291 LGI4Q8N135 537 aa14.85□□□□□ -0.03
DDX55-202ENST00000354291 MCOLN3Q8TDD5 553 aa14.85□□□□□ -0.03
DDX55-202ENST00000354291 PANX3Q96QZ0 392 aa14.85□□□□□ -0.03
DDX55-202ENST00000354291 NEUROD4Q9HD90 331 aa14.85□□□□□ -0.03
DDX55-202ENST00000354291 PNPLA3Q9NST1 481 aa14.85□□□□□ -0.03
DDX55-202ENST00000354291 TREX1Q9NSU2 369 aa14.85□□□□□ -0.03
DDX55-202ENST00000354291 PCYOX1Q9UHG3 505 aa14.85□□□□□ -0.03
DDX55-202ENST00000354291 TSR3Q9UJK0 312 aaKnown RBP14.85□□□□□ -0.03
DDX55-202ENST00000354291 ZNF407Q9C0G0 2248 aa14.85□□□□□ -0.03
DDX55-202ENST00000354291 HIVEP2P31629 2446 aa14.84□□□□□ -0.03
DDX55-202ENST00000354291 IGKV1-8A0A0C4DH67 115 aa14.84□□□□□ -0.03
DDX55-202ENST00000354291 H0YIG0 161 aa14.84□□□□□ -0.03
DDX55-202ENST00000354291 PFDN6O15212 129 aa14.84□□□□□ -0.03
DDX55-202ENST00000354291 NDUFS3O75489 264 aa14.84□□□□□ -0.03
DDX55-202ENST00000354291 CDC123O75794 336 aaPredicted RBP14.84□□□□□ -0.03
DDX55-202ENST00000354291 ATE1O95260 518 aa14.84□□□□□ -0.03
DDX55-202ENST00000354291 ACVR2AP27037 513 aa14.84□□□□□ -0.03
DDX55-202ENST00000354291 UQCRC1P31930 480 aa14.84□□□□□ -0.03
DDX55-202ENST00000354291 KCNJ1P48048 391 aa14.84□□□□□ -0.03
DDX55-202ENST00000354291 HLCSP50747 726 aa14.84□□□□□ -0.03
DDX55-202ENST00000354291 OR4D2P58180 307 aa14.84□□□□□ -0.03
DDX55-202ENST00000354291 SLC26A5P58743 744 aa14.84□□□□□ -0.03
DDX55-202ENST00000354291 GPR85P60893 370 aa14.84□□□□□ -0.03
DDX55-202ENST00000354291 CRADDP78560 199 aa14.84□□□□□ -0.03
DDX55-202ENST00000354291 SARNPP82979 210 aaKnown RBP14.84□□□□□ -0.03
DDX55-202ENST00000354291 USP10Q14694 798 aaKnown RBP14.84□□□□□ -0.03
DDX55-202ENST00000354291 ABRAXAS2Q15018 415 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms