RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 SSX1Q16384 188 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 PSAPL1Q6NUJ1 521 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 ARSKQ6UWY0 536 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 KIF18BQ86Y91 864 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 AGBL3Q8NEM8 1001 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 POF1BQ8WVV4 589 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 NELL1Q92832 810 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 SIGLEC11Q96RL6 698 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 NIPSNAP1Q9BPW8 284 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 TMEM45AQ9NWC5 275 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 ZNF226Q9NYT6 803 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 ATP6V1HQ9UI12 483 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 FKBPLQ9UIM3 349 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 RIMKLBQ9ULI2 386 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 H3BN98 237 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 RFPL3O75679 317 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 MMP2P08253 660 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 TACR1P25103 407 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 SSTR2P30874 369 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 CSTF2P33240 577 aaKnown RBP eCLIP7.37□□□□□ -1.23
BRCA1-201ENST00000352993 ITGA1P56199 1179 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 RRAS2P62070 204 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-201ENST00000352993 ABATP80404 500 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 SPHARQ15513 63 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 ALFQ53S48 1182 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 FAM171BQ6P995 826 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 ASB18Q6ZVZ8 466 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 CHMP1BQ7LBR1 199 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 MIB1Q86YT6 1006 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 PIANPQ8IYJ0 282 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 GDPD1Q8N9F7 314 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 C7orf57Q8NEG2 295 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 OR52E4Q8NGH9 312 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 RPRD1AQ96P16 312 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-201ENST00000352993 TM9SF2Q99805 663 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 ANKRA2Q9H9E1 313 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 PAK6Q9NQU5 681 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-201ENST00000352993 RDH8Q9NYR8 311 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 NINQ8N4C6 2090 aa7.37□□□□□ -1.23
BRCA1-201ENST00000352993 PLA2G10O15496 165 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 RAMP2O60895 175 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 MTRF1O75570 445 aaKnown RBP7.36□□□□□ -1.23
BRCA1-201ENST00000352993 NUDT7P0C024 238 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 COX7A2P14406 83 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 EDNRBP24530 442 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 FEN1P39748 380 aaKnown RBP7.36□□□□□ -1.23
BRCA1-201ENST00000352993 EIF4HQ15056 248 aaKnown RBP7.36□□□□□ -1.23
BRCA1-201ENST00000352993 UGT8Q16880 541 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 EXOC3L2Q2M3D2 409 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 ZBTB37Q5TC79 503 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 FAHD1Q6P587 224 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 UBE2Q1Q7Z7E8 422 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 CALHM3Q86XJ0 350 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 DENND1CQ8IV53 801 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 ZNF680Q8NEM1 530 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 TRPM4Q8TD43 1214 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 POP5Q969H6 163 aaKnown RBP7.36□□□□□ -1.23
BRCA1-201ENST00000352993 COPS8Q99627 209 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 GTPBP2Q9BX10 602 aaKnown RBP7.36□□□□□ -1.23
BRCA1-201ENST00000352993 TMEM245Q9H330 911 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 ABHD16BQ9H3Z7 469 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 TLR8Q9NR97 1041 aaKnown RBP7.36□□□□□ -1.23
BRCA1-201ENST00000352993 PLCXD1Q9NUJ7 323 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 RHCGQ9UBD6 479 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 SEC14L4Q9UDX3 406 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 POFUT2Q9Y2G5 429 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 MED16Q9Y2X0 877 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 TRAV6A0A075B6T7 132 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 A0A1W2PRG6 482 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 PRR23AA6NEV1 266 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 CASTOR2A6NHX0 329 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 MAGEB17A8MXT2 336 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 CASKO14936 926 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 LYRM1O43325 122 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 PRAMEF1O95521 474 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 ARSBP15848 533 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 EPB42P16452 691 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 OR1E1P30953 314 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 SDC2P34741 201 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 LHX1P48742 406 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 ZNF81P51508 661 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 RPL6Q02878 288 aaKnown RBP7.36□□□□□ -1.23
BRCA1-201ENST00000352993 TNK1Q13470 666 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 PLAG1Q6DJT9 500 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 USP30Q70CQ3 517 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 ZNF598Q86UK7 904 aaKnown RBP7.36□□□□□ -1.23
BRCA1-201ENST00000352993 SYT12Q8IV01 421 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 KLHDC8BQ8IXV7 354 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 STK40Q8N2I9 435 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 ZBTB44Q8NCP5 570 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 DENND6BQ8NEG7 585 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 GPR150Q8NGU9 434 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 CD200R1Q8TD46 325 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 SH3KBP1Q96B97 665 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 KLRG1Q96E93 195 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 C8orf48Q96LL4 319 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 DCLRE1CQ96SD1 692 aaKnown RBP7.36□□□□□ -1.23
BRCA1-201ENST00000352993 TMEM184CQ9NVA4 438 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 SPATA2Q9UM82 520 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 ACTL7AQ9Y615 435 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms