RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 KLC1Q07866 573 aa20.95■□□□□ 0.94
SNX3-202ENST00000349379 TBCCQ15814 346 aa20.95■□□□□ 0.94
SNX3-202ENST00000349379 VWA2Q5GFL6 755 aa20.95■□□□□ 0.94
SNX3-202ENST00000349379 TMIGD1Q6UXZ0 262 aa20.95■□□□□ 0.94
SNX3-202ENST00000349379 MED25Q71SY5 747 aa20.95■□□□□ 0.94
SNX3-202ENST00000349379 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.95■□□□□ 0.94
SNX3-202ENST00000349379 TMEM102Q8N9M5 508 aaPredicted RBP20.95■□□□□ 0.94
SNX3-202ENST00000349379 SNX31Q8N9S9 440 aa20.95■□□□□ 0.94
SNX3-202ENST00000349379 ZCCHC10Q8TBK6 192 aa20.95■□□□□ 0.94
SNX3-202ENST00000349379 MIEF2Q96C03 454 aa20.95■□□□□ 0.94
SNX3-202ENST00000349379 SEC16BQ96JE7 1060 aa20.95■□□□□ 0.94
SNX3-202ENST00000349379 SEMA3GQ9NS98 782 aa20.95■□□□□ 0.94
SNX3-202ENST00000349379 C14orf105Q9NVL8 296 aa20.95■□□□□ 0.94
SNX3-202ENST00000349379 PSMC3IPQ9P2W1 217 aaPredicted RBP20.95■□□□□ 0.94
SNX3-202ENST00000349379 TRPC4Q9UBN4 977 aa20.95■□□□□ 0.94
SNX3-202ENST00000349379 IQANK1A0A1B0GTG1 560 aa20.94■□□□□ 0.94
SNX3-202ENST00000349379 H2AFYO75367 372 aaKnown RBP20.94■□□□□ 0.94
SNX3-202ENST00000349379 DNAJB5O75953 348 aa20.94■□□□□ 0.94
SNX3-202ENST00000349379 WFS1O76024 890 aa20.94■□□□□ 0.94
SNX3-202ENST00000349379 SERPINA6P08185 405 aa20.94■□□□□ 0.94
SNX3-202ENST00000349379 SMIM10L1P0DMW3 83 aa20.94■□□□□ 0.94
SNX3-202ENST00000349379 RGS1Q08116 209 aa20.94■□□□□ 0.94
SNX3-202ENST00000349379 DOC2AQ14183 400 aa20.94■□□□□ 0.94
SNX3-202ENST00000349379 RBBP5Q15291 538 aaKnown RBP20.94■□□□□ 0.94
SNX3-202ENST00000349379 PCBP2Q15366 365 aaKnown RBP eCLIP20.94■□□□□ 0.94
SNX3-202ENST00000349379 PFKFB4Q16877 469 aa20.94■□□□□ 0.94
SNX3-202ENST00000349379 SYT16Q17RD7 645 aa20.94■□□□□ 0.94
SNX3-202ENST00000349379 WDR93Q6P2C0 686 aa20.94■□□□□ 0.94
SNX3-202ENST00000349379 SHISA6Q6ZSJ9 500 aa20.94■□□□□ 0.94
SNX3-202ENST00000349379 ZC3H7AQ8IWR0 971 aaKnown RBP20.94■□□□□ 0.94
SNX3-202ENST00000349379 KRT78Q8N1N4 520 aa20.94■□□□□ 0.94
SNX3-202ENST00000349379 ZNF843Q8N446 348 aa20.94■□□□□ 0.94
SNX3-202ENST00000349379 TTLQ8NG68 377 aa20.94■□□□□ 0.94
SNX3-202ENST00000349379 PTCD3Q96EY7 689 aaKnown RBP20.94■□□□□ 0.94
SNX3-202ENST00000349379 SMIM10Q96HG1 83 aa20.94■□□□□ 0.94
SNX3-202ENST00000349379 EFCAB11Q9BUY7 163 aa20.94■□□□□ 0.94
SNX3-202ENST00000349379 AICDAQ9GZX7 198 aa20.94■□□□□ 0.94
SNX3-202ENST00000349379 ING2Q9H160 280 aa20.94■□□□□ 0.94
SNX3-202ENST00000349379 SLC25A18Q9H1K4 315 aa20.94■□□□□ 0.94
SNX3-202ENST00000349379 ANKHQ9HCJ1 492 aa20.94■□□□□ 0.94
SNX3-202ENST00000349379 P4HTMQ9NXG6 502 aa20.94■□□□□ 0.94
SNX3-202ENST00000349379 XPR1Q9UBH6 696 aa20.94■□□□□ 0.94
SNX3-202ENST00000349379 OPTCQ9UBM4 332 aa20.94■□□□□ 0.94
SNX3-202ENST00000349379 HS3ST3B1Q9Y662 390 aa20.94■□□□□ 0.94
SNX3-202ENST00000349379 SOCS6O14544 535 aa20.93■□□□□ 0.94
SNX3-202ENST00000349379 FFAR3O14843 346 aa20.93■□□□□ 0.94
SNX3-202ENST00000349379 GPR42O15529 346 aa20.93■□□□□ 0.94
SNX3-202ENST00000349379 CEACAM4O75871 244 aa20.93■□□□□ 0.94
SNX3-202ENST00000349379 KLHL18O94889 574 aa20.93■□□□□ 0.94
SNX3-202ENST00000349379 IGHEP01854 428 aa20.93■□□□□ 0.94
SNX3-202ENST00000349379 SHBGP04278 402 aa20.93■□□□□ 0.94
SNX3-202ENST00000349379 GFAPP14136 432 aa20.93■□□□□ 0.94
SNX3-202ENST00000349379 ALOX12P18054 663 aa20.93■□□□□ 0.94
SNX3-202ENST00000349379 MAT1AQ00266 395 aaKnown RBP20.93■□□□□ 0.94
SNX3-202ENST00000349379 CHAF1BQ13112 559 aa20.93■□□□□ 0.94
SNX3-202ENST00000349379 HERC3Q15034 1050 aa20.93■□□□□ 0.94
SNX3-202ENST00000349379 XKR6Q5GH73 641 aa20.93■□□□□ 0.94
SNX3-202ENST00000349379 METTL2BQ6P1Q9 378 aaKnown RBP20.93■□□□□ 0.94
SNX3-202ENST00000349379 VN1R5Q7Z5H4 357 aa20.93■□□□□ 0.94
SNX3-202ENST00000349379 LAPTM4BQ86VI4 370 aa20.93■□□□□ 0.94
SNX3-202ENST00000349379 TDRPQ86YL5 185 aa20.93■□□□□ 0.94
SNX3-202ENST00000349379 TMEM151AQ8N4L1 468 aa20.93■□□□□ 0.94
SNX3-202ENST00000349379 UTP15Q8TED0 518 aaKnown RBP20.93■□□□□ 0.94
SNX3-202ENST00000349379 UBLCP1Q8WVY7 318 aaPredicted RBP20.93■□□□□ 0.94
SNX3-202ENST00000349379 ABHD17AQ96GS6 310 aa20.93■□□□□ 0.94
SNX3-202ENST00000349379 CCDC77Q9BR77 488 aa20.93■□□□□ 0.94
SNX3-202ENST00000349379 CRB3Q9BUF7 120 aa20.93■□□□□ 0.94
SNX3-202ENST00000349379 PPCSQ9HAB8 311 aa20.93■□□□□ 0.94
SNX3-202ENST00000349379 ZNF490Q9ULM2 529 aaPredicted RBP20.93■□□□□ 0.94
SNX3-202ENST00000349379 EIF4E1BA6NMX2 242 aaKnown RBP20.92■□□□□ 0.94
SNX3-202ENST00000349379 SGK494L7N484 410 aa20.92■□□□□ 0.94
SNX3-202ENST00000349379 AGPSO00116 658 aa20.92■□□□□ 0.94
SNX3-202ENST00000349379 GALR3O60755 368 aaPredicted RBP20.92■□□□□ 0.94
SNX3-202ENST00000349379 CLEC3AO75596 197 aa20.92■□□□□ 0.94
SNX3-202ENST00000349379 BMP10O95393 424 aa20.92■□□□□ 0.94
SNX3-202ENST00000349379 TBX6O95947 436 aaPredicted RBP20.92■□□□□ 0.94
SNX3-202ENST00000349379 SERPIND1P05546 499 aa20.92■□□□□ 0.94
SNX3-202ENST00000349379 SBK3P0C264 359 aa20.92■□□□□ 0.94
SNX3-202ENST00000349379 EFNA3P52797 238 aa20.92■□□□□ 0.94
SNX3-202ENST00000349379 RRADP55042 308 aa20.92■□□□□ 0.94
SNX3-202ENST00000349379 IRF8Q02556 426 aa20.92■□□□□ 0.94
SNX3-202ENST00000349379 CHIT1Q13231 466 aa20.92■□□□□ 0.94
SNX3-202ENST00000349379 LAPTM5Q13571 262 aa20.92■□□□□ 0.94
SNX3-202ENST00000349379 RASA2Q15283 850 aa20.92■□□□□ 0.94
SNX3-202ENST00000349379 NIPAL1Q6NVV3 410 aa20.92■□□□□ 0.94
SNX3-202ENST00000349379 LCA5Q86VQ0 697 aa20.92■□□□□ 0.94
SNX3-202ENST00000349379 SHISA5Q8N114 240 aa20.92■□□□□ 0.94
SNX3-202ENST00000349379 C9orf43Q8TAL5 461 aaPredicted RBP20.92■□□□□ 0.94
SNX3-202ENST00000349379 ACMSDQ8TDX5 336 aa20.92■□□□□ 0.94
SNX3-202ENST00000349379 AENQ8WTP8 325 aaKnown RBP20.92■□□□□ 0.94
SNX3-202ENST00000349379 FER1L6-AS2Q96M78 137 aa20.92■□□□□ 0.94
SNX3-202ENST00000349379 MRPL57Q9BQC6 102 aaKnown RBP20.92■□□□□ 0.94
SNX3-202ENST00000349379 RHBGQ9H310 441 aa20.92■□□□□ 0.94
SNX3-202ENST00000349379 MLXIPLQ9NP71 852 aa20.92■□□□□ 0.94
SNX3-202ENST00000349379 ACSS2Q9NR19 701 aa20.92■□□□□ 0.94
SNX3-202ENST00000349379 CPSF2Q9P2I0 782 aaKnown RBP20.92■□□□□ 0.94
SNX3-202ENST00000349379 TMCO1Q9UM00 188 aa20.92■□□□□ 0.94
SNX3-202ENST00000349379 NAALAD2Q9Y3Q0 740 aa20.92■□□□□ 0.94
SNX3-202ENST00000349379 PCDHGA9Q9Y5G4 932 aaKnown RBP20.92■□□□□ 0.94
SNX3-202ENST00000349379 A0A1W2PQ72 361 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms