RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 RPS13P62277 151 aaKnown RBP17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 HBA1P69905 142 aa17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 PLEKHS1Q5SXH7 462 aa17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 LIPJQ5W064 366 aa17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 MSANTD1Q6ZTZ1 278 aa17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 OR9Q2Q8NGE9 314 aa17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 OR4A15Q8NGL6 344 aa17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 OR5AK3PQ8NH89 298 aa17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 UTP15Q8TED0 518 aaKnown RBP17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 CIDECQ96AQ7 238 aaPredicted RBP17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 DOHHQ9BU89 302 aa17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 ITPAQ9BY32 194 aa17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 OR51E2Q9H255 320 aa17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 FAM83DQ9H4H8 585 aa17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 STOX2Q9P2F5 926 aaPredicted RBP17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 SH2B3Q9UQQ2 575 aa17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 PCDHGB3Q9Y5G1 929 aa17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 A8MU76 341 aa17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 ADRA2AP08913 450 aa17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 CD40LGP29965 261 aa17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 PTPN5P54829 565 aa17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 CDH12P55289 794 aa17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 AP1S2P56377 157 aa17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 PPIGQ13427 754 aaKnown RBP eCLIP17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 VEZF1Q14119 521 aa17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 TTC23LQ6PF05 361 aa17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 DACH2Q96NX9 599 aa17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 TRIM39Q9HCM9 518 aa17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 PSORS1C1Q9UIG5 152 aa17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 CAB39Q9Y376 341 aaPredicted RBP17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 E9PQ18 207 aa17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 LEFTY2O00292 366 aa17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 TBX1O43435 398 aa17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 MAGEA8P43361 318 aa17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 MVDP53602 400 aa17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 MEF2AQ02078 507 aaPredicted RBP17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 TIGD6Q17RP2 521 aa17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 UBE2UQ5VVX9 321 aa17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 FAM83FQ8NEG4 500 aaPredicted RBP17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 ASZ1Q8WWH4 475 aa17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 C19orf43Q9BQ61 176 aa17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 SLC46A2Q9BY10 475 aa17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 ADPRHL2Q9NX46 363 aa17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 ZNF229Q9UJW7 825 aa17.41■□□□□ 0.38
PTP4A3-202ENST00000349124 MGAT4DA6NG13 374 aa17.4■□□□□ 0.38
PTP4A3-202ENST00000349124 POP4O95707 220 aaKnown RBP17.4■□□□□ 0.38
PTP4A3-202ENST00000349124 HSMCR30P0CW71 290 aa17.4■□□□□ 0.38
PTP4A3-202ENST00000349124 GTF2E2P29084 291 aaKnown RBP17.4■□□□□ 0.38
PTP4A3-202ENST00000349124 TMED10P49755 219 aaKnown RBP17.4■□□□□ 0.38
PTP4A3-202ENST00000349124 CSTF3Q12996 717 aaKnown RBP17.4■□□□□ 0.38
PTP4A3-202ENST00000349124 PRSS53Q2L4Q9 553 aa17.4■□□□□ 0.38
PTP4A3-202ENST00000349124 NPAS3Q8IXF0 933 aa17.4■□□□□ 0.38
PTP4A3-202ENST00000349124 MRPS31Q92665 395 aaKnown RBP17.4■□□□□ 0.38
PTP4A3-202ENST00000349124 NEIL2Q969S2 332 aa17.4■□□□□ 0.38
PTP4A3-202ENST00000349124 PKP4Q99569 1192 aa17.4■□□□□ 0.38
PTP4A3-202ENST00000349124 BCL7BQ9BQE9 202 aa17.4■□□□□ 0.38
PTP4A3-202ENST00000349124 CCNB1IP1Q9NPC3 277 aa17.4■□□□□ 0.38
PTP4A3-202ENST00000349124 GIN1Q9NXP7 522 aa17.4■□□□□ 0.38
PTP4A3-202ENST00000349124 ZNF226Q9NYT6 803 aa17.4■□□□□ 0.38
PTP4A3-202ENST00000349124 RHCGQ9UBD6 479 aa17.4■□□□□ 0.38
PTP4A3-202ENST00000349124 HS3ST2Q9Y278 367 aa17.4■□□□□ 0.38
PTP4A3-202ENST00000349124 RBMX2Q9Y388 322 aaKnown RBP17.4■□□□□ 0.38
PTP4A3-202ENST00000349124 CDH23Q9H251 3354 aa17.4■□□□□ 0.38
PTP4A3-202ENST00000349124 DSCR3O14972 297 aa17.4■□□□□ 0.38
PTP4A3-202ENST00000349124 KDM1AO60341 852 aa17.4■□□□□ 0.38
PTP4A3-202ENST00000349124 SELENOWP63302 87 aa17.4■□□□□ 0.38
PTP4A3-202ENST00000349124 TP53BP2Q13625 1128 aa17.4■□□□□ 0.38
PTP4A3-202ENST00000349124 DOC2BQ14184 412 aa17.4■□□□□ 0.38
PTP4A3-202ENST00000349124 EXOC3L2Q2M3D2 409 aa17.4■□□□□ 0.38
PTP4A3-202ENST00000349124 TCEAL8Q8IYN2 117 aa17.4■□□□□ 0.38
PTP4A3-202ENST00000349124 MMP21Q8N119 569 aa17.4■□□□□ 0.38
PTP4A3-202ENST00000349124 DNAJC22Q8N4W6 341 aa17.4■□□□□ 0.38
PTP4A3-202ENST00000349124 ZNF366Q8N895 744 aa17.4■□□□□ 0.38
PTP4A3-202ENST00000349124 OR10G2Q8NGC3 310 aa17.4■□□□□ 0.38
PTP4A3-202ENST00000349124 OR2A12Q8NGT7 310 aa17.4■□□□□ 0.38
PTP4A3-202ENST00000349124 CLP1Q92989 425 aaKnown RBP17.4■□□□□ 0.38
PTP4A3-202ENST00000349124 EPYCQ99645 322 aa17.4■□□□□ 0.38
PTP4A3-202ENST00000349124 HMX1Q9NP08 348 aaPredicted RBP17.4■□□□□ 0.38
PTP4A3-202ENST00000349124 PLXNB3Q9ULL4 1909 aa17.39■□□□□ 0.37
PTP4A3-202ENST00000349124 CLDN24A6NM45 220 aa17.39■□□□□ 0.37
PTP4A3-202ENST00000349124 NEDD8-MDP1E9PL57 170 aa17.39■□□□□ 0.37
PTP4A3-202ENST00000349124 PCDH17O14917 1159 aa17.39■□□□□ 0.37
PTP4A3-202ENST00000349124 TLL1O43897 1013 aa17.39■□□□□ 0.37
PTP4A3-202ENST00000349124 SLCO2B1O94956 709 aa17.39■□□□□ 0.37
PTP4A3-202ENST00000349124 C6orf47O95873 294 aa17.39■□□□□ 0.37
PTP4A3-202ENST00000349124 PTHP01270 115 aa17.39■□□□□ 0.37
PTP4A3-202ENST00000349124 HOXB6P17509 224 aaKnown RBP17.39■□□□□ 0.37
PTP4A3-202ENST00000349124 IMPA1P29218 277 aa17.39■□□□□ 0.37
PTP4A3-202ENST00000349124 PPP5CP53041 499 aa17.39■□□□□ 0.37
PTP4A3-202ENST00000349124 RASGEF1AQ8N9B8 481 aa17.39■□□□□ 0.37
PTP4A3-202ENST00000349124 NFKBIDQ8NI38 313 aa17.39■□□□□ 0.37
PTP4A3-202ENST00000349124 CYB5D2Q8WUJ1 264 aa17.39■□□□□ 0.37
PTP4A3-202ENST00000349124 IPCEF1Q8WWN9 437 aaPredicted RBP17.39■□□□□ 0.37
PTP4A3-202ENST00000349124 GTPBP3Q969Y2 492 aaKnown RBP17.39■□□□□ 0.37
PTP4A3-202ENST00000349124 TCF25Q9BQ70 676 aa17.39■□□□□ 0.37
PTP4A3-202ENST00000349124 KLHL25Q9H0H3 589 aa17.39■□□□□ 0.37
PTP4A3-202ENST00000349124 MAP4K5Q9Y4K4 846 aa17.39■□□□□ 0.37
PTP4A3-202ENST00000349124 EIF3FO00303 357 aaPredicted RBP17.39■□□□□ 0.37
PTP4A3-202ENST00000349124 PRMT3O60678 531 aa17.39■□□□□ 0.37
PTP4A3-202ENST00000349124 MYO1DO94832 1006 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms