RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 AP2S1P53680 142 aaPredicted RBP18■□□□□ 0.47
SCARF1-202ENST00000348987 BNC1Q01954 994 aa18■□□□□ 0.47
SCARF1-202ENST00000348987 RING1Q06587 406 aa18■□□□□ 0.47
SCARF1-202ENST00000348987 MAD2L1Q13257 205 aaPredicted RBP18■□□□□ 0.47
SCARF1-202ENST00000348987 MRPL58Q14197 206 aaKnown RBP18■□□□□ 0.47
SCARF1-202ENST00000348987 PXDC1Q5TGL8 231 aa18■□□□□ 0.47
SCARF1-202ENST00000348987 KIAA1841Q6NSI8 718 aa18■□□□□ 0.47
SCARF1-202ENST00000348987 UTP15Q8TED0 518 aaKnown RBP18■□□□□ 0.47
SCARF1-202ENST00000348987 TMEM184CQ9NVA4 438 aa18■□□□□ 0.47
SCARF1-202ENST00000348987 ZNF226Q9NYT6 803 aa18■□□□□ 0.47
SCARF1-202ENST00000348987 GPRC5BQ9NZH0 403 aa18■□□□□ 0.47
SCARF1-202ENST00000348987 SLC6A14Q9UN76 642 aa18■□□□□ 0.47
SCARF1-202ENST00000348987 NUP214P35658 2090 aaPredicted RBP17.99■□□□□ 0.47
SCARF1-202ENST00000348987 SMLR1H3BR10 107 aa17.99■□□□□ 0.47
SCARF1-202ENST00000348987 KLKB1P03952 638 aa17.99■□□□□ 0.47
SCARF1-202ENST00000348987 COL6A1P12109 1028 aa17.99■□□□□ 0.47
SCARF1-202ENST00000348987 PKMP14618 531 aaKnown RBP17.99■□□□□ 0.47
SCARF1-202ENST00000348987 ATF6P18850 670 aa17.99■□□□□ 0.47
SCARF1-202ENST00000348987 GDF5P43026 501 aa17.99■□□□□ 0.47
SCARF1-202ENST00000348987 KIR2DL3P43628 341 aa17.99■□□□□ 0.47
SCARF1-202ENST00000348987 FAM189BP81408 668 aa17.99■□□□□ 0.47
SCARF1-202ENST00000348987 DMC1Q14565 340 aa17.99■□□□□ 0.47
SCARF1-202ENST00000348987 SSX1Q16384 188 aa17.99■□□□□ 0.47
SCARF1-202ENST00000348987 TIMM50Q3ZCQ8 353 aa17.99■□□□□ 0.47
SCARF1-202ENST00000348987 ZRANB3Q5FWF4 1079 aa17.99■□□□□ 0.47
SCARF1-202ENST00000348987 TAS1R1Q7RTX1 841 aa17.99■□□□□ 0.47
SCARF1-202ENST00000348987 RNF130Q86XS8 419 aa17.99■□□□□ 0.47
SCARF1-202ENST00000348987 PLCZ1Q86YW0 608 aa17.99■□□□□ 0.47
SCARF1-202ENST00000348987 RGL4Q8IZJ4 473 aa17.99■□□□□ 0.47
SCARF1-202ENST00000348987 B3GNT7Q8NFL0 401 aa17.99■□□□□ 0.47
SCARF1-202ENST00000348987 POP5Q969H6 163 aaKnown RBP17.99■□□□□ 0.47
SCARF1-202ENST00000348987 TTLL2Q9BWV7 592 aa17.99■□□□□ 0.47
SCARF1-202ENST00000348987 LRTM1Q9HBL6 345 aa17.99■□□□□ 0.47
SCARF1-202ENST00000348987 GKN1Q9NS71 199 aa17.99■□□□□ 0.47
SCARF1-202ENST00000348987 SNTG1Q9NSN8 517 aa17.99■□□□□ 0.47
SCARF1-202ENST00000348987 MS4A12Q9NXJ0 267 aa17.99■□□□□ 0.47
SCARF1-202ENST00000348987 COQ3Q9NZJ6 369 aa17.99■□□□□ 0.47
SCARF1-202ENST00000348987 ANKRD36A6QL64 1941 aa17.99■□□□□ 0.47
SCARF1-202ENST00000348987 OR2B3O76000 313 aa17.99■□□□□ 0.47
SCARF1-202ENST00000348987 EOMESO95936 686 aa17.99■□□□□ 0.47
SCARF1-202ENST00000348987 ESR1P03372 595 aa17.99■□□□□ 0.47
SCARF1-202ENST00000348987 BCKDHAP12694 445 aa17.99■□□□□ 0.47
SCARF1-202ENST00000348987 S100A3P33764 101 aa17.99■□□□□ 0.47
SCARF1-202ENST00000348987 KDELR2P33947 212 aa17.99■□□□□ 0.47
SCARF1-202ENST00000348987 ITGA1P56199 1179 aa17.99■□□□□ 0.47
SCARF1-202ENST00000348987 POU6F2P78424 691 aaPredicted RBP17.99■□□□□ 0.47
SCARF1-202ENST00000348987 TAF1AQ15573 450 aaPredicted RBP17.99■□□□□ 0.47
SCARF1-202ENST00000348987 TOR2AQ5JU69 321 aa17.99■□□□□ 0.47
SCARF1-202ENST00000348987 TCTE3Q8IZS6 198 aa17.99■□□□□ 0.47
SCARF1-202ENST00000348987 ESX1Q8N693 406 aa17.99■□□□□ 0.47
SCARF1-202ENST00000348987 CRELD1Q96HD1 420 aa17.99■□□□□ 0.47
SCARF1-202ENST00000348987 FEVQ99581 238 aa17.99■□□□□ 0.47
SCARF1-202ENST00000348987 HDHD5Q9BXW7 423 aa17.99■□□□□ 0.47
SCARF1-202ENST00000348987 NSUN3Q9H649 340 aaKnown RBP17.99■□□□□ 0.47
SCARF1-202ENST00000348987 C2orf81A6NN90 581 aa17.98■□□□□ 0.47
SCARF1-202ENST00000348987 ADAM12O43184 909 aa17.98■□□□□ 0.47
SCARF1-202ENST00000348987 ACSL4O60488 711 aa17.98■□□□□ 0.47
SCARF1-202ENST00000348987 ASAH1Q13510 395 aa17.98■□□□□ 0.47
SCARF1-202ENST00000348987 PCBP2Q15366 365 aaKnown RBP eCLIP17.98■□□□□ 0.47
SCARF1-202ENST00000348987 USP39Q53GS9 565 aaKnown RBP17.98■□□□□ 0.47
SCARF1-202ENST00000348987 FAM26DQ5JW98 314 aa17.98■□□□□ 0.47
SCARF1-202ENST00000348987 C19orf48Q6RUI8 117 aa17.98■□□□□ 0.47
SCARF1-202ENST00000348987 FAM131AQ6UXB0 335 aa17.98■□□□□ 0.47
SCARF1-202ENST00000348987 C16orf59Q7L2K0 433 aa17.98■□□□□ 0.47
SCARF1-202ENST00000348987 FBXL6Q8N531 539 aa17.98■□□□□ 0.47
SCARF1-202ENST00000348987 CAMKK1Q8N5S9 505 aa17.98■□□□□ 0.47
SCARF1-202ENST00000348987 REPS1Q96D71 796 aa17.98■□□□□ 0.47
SCARF1-202ENST00000348987 DPH2Q9BQC3 489 aaPredicted RBP17.98■□□□□ 0.47
SCARF1-202ENST00000348987 ABCG8Q9H221 673 aa17.98■□□□□ 0.47
SCARF1-202ENST00000348987 FAM83DQ9H4H8 585 aa17.98■□□□□ 0.47
SCARF1-202ENST00000348987 RIMKLBQ9ULI2 386 aa17.98■□□□□ 0.47
SCARF1-202ENST00000348987 RAI2Q9Y5P3 530 aa17.98■□□□□ 0.47
SCARF1-202ENST00000348987 SYN3O14994 580 aa17.98■□□□□ 0.47
SCARF1-202ENST00000348987 ULK1O75385 1050 aa17.98■□□□□ 0.47
SCARF1-202ENST00000348987 POU3F3P20264 500 aaPredicted RBP17.98■□□□□ 0.47
SCARF1-202ENST00000348987 PRSS55Q6UWB4 352 aaPredicted RBP17.98■□□□□ 0.47
SCARF1-202ENST00000348987 ZNF367Q7RTV3 350 aa17.98■□□□□ 0.47
SCARF1-202ENST00000348987 WBP2Q969T9 261 aa17.98■□□□□ 0.47
SCARF1-202ENST00000348987 TRMT61AQ96FX7 289 aaKnown RBP17.98■□□□□ 0.47
SCARF1-202ENST00000348987 CCM2Q9BSQ5 444 aa17.98■□□□□ 0.47
SCARF1-202ENST00000348987 MAGEH1Q9H213 219 aa17.98■□□□□ 0.47
SCARF1-202ENST00000348987 C12orf10Q9HB07 376 aa17.98■□□□□ 0.47
SCARF1-202ENST00000348987 RPS6KA6Q9UK32 745 aa17.98■□□□□ 0.47
SCARF1-202ENST00000348987 DLGAP4Q9Y2H0 992 aa17.98■□□□□ 0.47
SCARF1-202ENST00000348987 WDR47O94967 919 aa17.97■□□□□ 0.47
SCARF1-202ENST00000348987 CSF3P09919 207 aa17.97■□□□□ 0.47
SCARF1-202ENST00000348987 ZDHHC11BP0C7U3 371 aa17.97■□□□□ 0.47
SCARF1-202ENST00000348987 PSPHP78330 225 aa17.97■□□□□ 0.47
SCARF1-202ENST00000348987 TNK1Q13470 666 aa17.97■□□□□ 0.47
SCARF1-202ENST00000348987 VEPH1Q14D04 833 aa17.97■□□□□ 0.47
SCARF1-202ENST00000348987 C5orf22Q49AR2 442 aa17.97■□□□□ 0.47
SCARF1-202ENST00000348987 SLC35F1Q5T1Q4 408 aa17.97■□□□□ 0.47
SCARF1-202ENST00000348987 OR4F3Q6IEY1 312 aa17.97■□□□□ 0.47
SCARF1-202ENST00000348987 CCDC149Q6ZUS6 474 aa17.97■□□□□ 0.47
SCARF1-202ENST00000348987 LIX1LQ8IVB5 337 aa17.97■□□□□ 0.47
SCARF1-202ENST00000348987 EID2BQ96D98 161 aa17.97■□□□□ 0.47
SCARF1-202ENST00000348987 B3GNT4Q9C0J1 378 aa17.97■□□□□ 0.47
SCARF1-202ENST00000348987 DIABLOQ9NR28 239 aa17.97■□□□□ 0.47
SCARF1-202ENST00000348987 RLIMQ9NVW2 624 aa17.97■□□□□ 0.47
SCARF1-202ENST00000348987 MARCH5Q9NX47 278 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms