RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 MXD1Q05195 221 aa12.81□□□□□ -0.36
CASC4-202ENST00000345795 RUNX3Q13761 415 aa12.81□□□□□ -0.36
CASC4-202ENST00000345795 PROX1Q92786 737 aa12.81□□□□□ -0.36
CASC4-202ENST00000345795 HHIPL1Q96JK4 782 aa12.81□□□□□ -0.36
CASC4-202ENST00000345795 RHNO1Q9BSD3 238 aa12.81□□□□□ -0.36
CASC4-202ENST00000345795 SLC12A9Q9BXP2 914 aa12.81□□□□□ -0.36
CASC4-202ENST00000345795 TTTY10Q9BZA0 68 aa12.81□□□□□ -0.36
CASC4-202ENST00000345795 MBNL1Q9NR56 388 aaKnown RBP12.81□□□□□ -0.36
CASC4-202ENST00000345795 GULP1Q9UBP9 304 aa12.81□□□□□ -0.36
CASC4-202ENST00000345795 TMCC3Q9ULS5 477 aa12.81□□□□□ -0.36
CASC4-202ENST00000345795 SLC9A8Q9Y2E8 581 aa12.81□□□□□ -0.36
CASC4-202ENST00000345795 SNX11Q9Y5W9 270 aa12.81□□□□□ -0.36
CASC4-202ENST00000345795 H3BSH0 61 aa12.81□□□□□ -0.36
CASC4-202ENST00000345795 MAGEB3O15480 346 aa12.81□□□□□ -0.36
CASC4-202ENST00000345795 FZD6O60353 706 aa12.81□□□□□ -0.36
CASC4-202ENST00000345795 POLR2CP19387 275 aaPredicted RBP12.81□□□□□ -0.36
CASC4-202ENST00000345795 AVPR1BP47901 424 aa12.81□□□□□ -0.36
CASC4-202ENST00000345795 RPS3AP61247 264 aaKnown RBP12.81□□□□□ -0.36
CASC4-202ENST00000345795 PDCD4Q53EL6 469 aaKnown RBP12.81□□□□□ -0.36
CASC4-202ENST00000345795 TYW3Q6IPR3 259 aaKnown RBP12.81□□□□□ -0.36
CASC4-202ENST00000345795 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.81□□□□□ -0.36
CASC4-202ENST00000345795 METTL25Q8N6Q8 603 aa12.81□□□□□ -0.36
CASC4-202ENST00000345795 TTC29Q8NA56 475 aaPredicted RBP12.81□□□□□ -0.36
CASC4-202ENST00000345795 SLC5A11Q8WWX8 675 aa12.81□□□□□ -0.36
CASC4-202ENST00000345795 ZNF583Q96ND8 569 aa12.81□□□□□ -0.36
CASC4-202ENST00000345795 BRINP2Q9C0B6 783 aa12.81□□□□□ -0.36
CASC4-202ENST00000345795 SLC25A37Q9NYZ2 338 aa12.81□□□□□ -0.36
CASC4-202ENST00000345795 PPT2Q9UMR5 302 aa12.81□□□□□ -0.36
CASC4-202ENST00000345795 IRAK3Q9Y616 596 aa12.81□□□□□ -0.36
CASC4-202ENST00000345795 STON1Q9Y6Q2 735 aa12.81□□□□□ -0.36
CASC4-202ENST00000345795 COMMD3-BMI1R4GMX3 469 aa12.81□□□□□ -0.36
CASC4-202ENST00000345795 ZNF821O75541 412 aaPredicted RBP12.81□□□□□ -0.36
CASC4-202ENST00000345795 PRPS1L1P21108 318 aa12.81□□□□□ -0.36
CASC4-202ENST00000345795 RPS7P62081 194 aaKnown RBP12.81□□□□□ -0.36
CASC4-202ENST00000345795 TRAP1Q12931 704 aaKnown RBP12.81□□□□□ -0.36
CASC4-202ENST00000345795 ZC3H14Q6PJT7 736 aaKnown RBP12.81□□□□□ -0.36
CASC4-202ENST00000345795 SMARCD3Q6STE5 483 aa12.81□□□□□ -0.36
CASC4-202ENST00000345795 Q6ZNB5 142 aa12.81□□□□□ -0.36
CASC4-202ENST00000345795 GATAD2AQ86YP4 633 aa12.81□□□□□ -0.36
CASC4-202ENST00000345795 HIPK1Q86Z02 1210 aa12.81□□□□□ -0.36
CASC4-202ENST00000345795 UBE2J2Q8N2K1 259 aa12.81□□□□□ -0.36
CASC4-202ENST00000345795 OR9A1PQ8NGU1 263 aa12.81□□□□□ -0.36
CASC4-202ENST00000345795 PATE1Q8WXA2 126 aa12.81□□□□□ -0.36
CASC4-202ENST00000345795 EPB41L1Q9H4G0 881 aa12.81□□□□□ -0.36
CASC4-202ENST00000345795 ITM2CQ9NQX7 267 aa12.81□□□□□ -0.36
CASC4-202ENST00000345795 PHPT1Q9NRX4 125 aaPredicted RBP12.81□□□□□ -0.36
CASC4-202ENST00000345795 PCDHB3Q9Y5E6 796 aa12.81□□□□□ -0.36
CASC4-202ENST00000345795 RTTNQ86VV8 2226 aa12.81□□□□□ -0.36
CASC4-202ENST00000345795 UNC13CQ8NB66 2214 aa12.81□□□□□ -0.36
CASC4-202ENST00000345795 SPTA1P02549 2419 aa12.81□□□□□ -0.36
CASC4-202ENST00000345795 GREB1Q4ZG55 1949 aa12.8□□□□□ -0.36
CASC4-202ENST00000345795 KLF8O95600 359 aaPredicted RBP12.8□□□□□ -0.36
CASC4-202ENST00000345795 PVRP15151 417 aa12.8□□□□□ -0.36
CASC4-202ENST00000345795 GJA4P35212 333 aa12.8□□□□□ -0.36
CASC4-202ENST00000345795 SEPHS1P49903 392 aa12.8□□□□□ -0.36
CASC4-202ENST00000345795 PCM1Q15154 2024 aa12.8□□□□□ -0.36
CASC4-202ENST00000345795 FAM46CQ5VWP2 391 aa12.8□□□□□ -0.36
CASC4-202ENST00000345795 KHDRBS2Q5VWX1 349 aaKnown RBP12.8□□□□□ -0.36
CASC4-202ENST00000345795 FAM83HQ6ZRV2 1179 aaPredicted RBP12.8□□□□□ -0.36
CASC4-202ENST00000345795 THAP5Q7Z6K1 395 aa12.8□□□□□ -0.36
CASC4-202ENST00000345795 LRRTM4Q86VH4 590 aa12.8□□□□□ -0.36
CASC4-202ENST00000345795 EPHX4Q8IUS5 362 aa12.8□□□□□ -0.36
CASC4-202ENST00000345795 C11orf65Q8NCR3 313 aa12.8□□□□□ -0.36
CASC4-202ENST00000345795 OR9Q2Q8NGE9 314 aa12.8□□□□□ -0.36
CASC4-202ENST00000345795 TMEM203Q969S6 136 aa12.8□□□□□ -0.36
CASC4-202ENST00000345795 TIFAQ96CG3 184 aa12.8□□□□□ -0.36
CASC4-202ENST00000345795 CACNB4O00305 520 aaPredicted RBP12.8□□□□□ -0.36
CASC4-202ENST00000345795 PRKNO60260 465 aaPredicted RBP12.8□□□□□ -0.36
CASC4-202ENST00000345795 EPHA2P29317 976 aa12.8□□□□□ -0.36
CASC4-202ENST00000345795 EEFSECP57772 596 aaKnown RBP12.8□□□□□ -0.36
CASC4-202ENST00000345795 PHC1P78364 1004 aa12.8□□□□□ -0.36
CASC4-202ENST00000345795 CSTF3Q12996 717 aaKnown RBP12.8□□□□□ -0.36
CASC4-202ENST00000345795 COX20Q5RI15 118 aa12.8□□□□□ -0.36
CASC4-202ENST00000345795 KLHL17Q6TDP4 642 aa12.8□□□□□ -0.36
CASC4-202ENST00000345795 ACTL8Q9H568 366 aa12.8□□□□□ -0.36
CASC4-202ENST00000345795 TMPRSS11EQ9UL52 423 aa12.8□□□□□ -0.36
CASC4-202ENST00000345795 PIPSLA2A3N6 862 aa12.8□□□□□ -0.36
CASC4-202ENST00000345795 SLC22A2O15244 555 aa12.8□□□□□ -0.36
CASC4-202ENST00000345795 ZW10O43264 779 aa12.8□□□□□ -0.36
CASC4-202ENST00000345795 PRAMEF10O60809 474 aa12.8□□□□□ -0.36
CASC4-202ENST00000345795 PRPS2P11908 318 aa12.8□□□□□ -0.36
CASC4-202ENST00000345795 CDH2P19022 906 aaPredicted RBP12.8□□□□□ -0.36
CASC4-202ENST00000345795 PIGAP37287 484 aa12.8□□□□□ -0.36
CASC4-202ENST00000345795 PRR23BQ6ZRT6 265 aa12.8□□□□□ -0.36
CASC4-202ENST00000345795 LRRC70Q7Z2Q7 622 aa12.8□□□□□ -0.36
CASC4-202ENST00000345795 GPR65Q8IYL9 337 aa12.8□□□□□ -0.36
CASC4-202ENST00000345795 CEP19Q96LK0 163 aa12.8□□□□□ -0.36
CASC4-202ENST00000345795 AIF1LQ9BQI0 150 aa12.8□□□□□ -0.36
CASC4-202ENST00000345795 CD93Q9NPY3 652 aa12.8□□□□□ -0.36
CASC4-202ENST00000345795 THUMPD1Q9NXG2 353 aaKnown RBP12.8□□□□□ -0.36
CASC4-202ENST00000345795 GIN1Q9NXP7 522 aa12.8□□□□□ -0.36
CASC4-202ENST00000345795 EHD3Q9NZN3 535 aa12.8□□□□□ -0.36
CASC4-202ENST00000345795 LRRC72A6NJI9 287 aa12.79□□□□□ -0.36
CASC4-202ENST00000345795 SDC3O75056 442 aa12.79□□□□□ -0.36
CASC4-202ENST00000345795 CCNA2P20248 432 aa12.79□□□□□ -0.36
CASC4-202ENST00000345795 P2RY2P41231 377 aa12.79□□□□□ -0.36
CASC4-202ENST00000345795 NCBP2P52298 156 aaKnown RBP eCLIP12.79□□□□□ -0.36
CASC4-202ENST00000345795 AP1S2P56377 157 aa12.79□□□□□ -0.36
CASC4-202ENST00000345795 PMS2P3Q13401 168 aa12.79□□□□□ -0.36
CASC4-202ENST00000345795 DEFB134Q4QY38 66 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms