RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 GLB1L3Q8NCI6 653 aaPredicted RBP8.88□□□□□ -0.99
ATG4A-202ENST00000345734 KLHDC7BQ96G42 594 aa8.88□□□□□ -0.99
ATG4A-202ENST00000345734 PLPPR2Q96GM1 343 aa8.88□□□□□ -0.99
ATG4A-202ENST00000345734 MRGPRX1Q96LB2 322 aa8.88□□□□□ -0.99
ATG4A-202ENST00000345734 UHRF1Q96T88 793 aaPredicted RBP8.88□□□□□ -0.99
ATG4A-202ENST00000345734 CGREF1Q99674 301 aa8.88□□□□□ -0.99
ATG4A-202ENST00000345734 ZNF184Q99676 751 aaPredicted RBP8.88□□□□□ -0.99
ATG4A-202ENST00000345734 KCTD14Q9BQ13 255 aaPredicted RBP8.88□□□□□ -0.99
ATG4A-202ENST00000345734 ECSITQ9BQ95 431 aa8.88□□□□□ -0.99
ATG4A-202ENST00000345734 PRO3102Q9H379 93 aa8.88□□□□□ -0.99
ATG4A-202ENST00000345734 C8orf33Q9H7E9 229 aaPredicted RBP8.88□□□□□ -0.99
ATG4A-202ENST00000345734 CCDC177Q9NQR7 707 aaPredicted RBP8.88□□□□□ -0.99
ATG4A-202ENST00000345734 ITM2CQ9NQX7 267 aa8.88□□□□□ -0.99
ATG4A-202ENST00000345734 VAPAQ9P0L0 249 aa8.88□□□□□ -0.99
ATG4A-202ENST00000345734 C6orf203Q9P0P8 240 aaPredicted RBP8.88□□□□□ -0.99
ATG4A-202ENST00000345734 VPS29Q9UBQ0 182 aa8.88□□□□□ -0.99
ATG4A-202ENST00000345734 RIMS3Q9UJD0 308 aa8.88□□□□□ -0.99
ATG4A-202ENST00000345734 KCNK6Q9Y257 313 aa8.88□□□□□ -0.99
ATG4A-202ENST00000345734 CA5BQ9Y2D0 317 aa8.88□□□□□ -0.99
ATG4A-202ENST00000345734 KANSL1LA0AUZ9 987 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 CASQ2O14958 399 aaPredicted RBP8.87□□□□□ -0.99
ATG4A-202ENST00000345734 ARPC2O15144 300 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 AKAP10O43572 662 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 NPPAP01160 153 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 IL6P05231 212 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 MTHFD1P11586 935 aaKnown RBP8.87□□□□□ -0.99
ATG4A-202ENST00000345734 PRPS2P11908 318 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 NCK1P16333 377 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 KELP23276 732 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 GIPRP48546 466 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 CLDN2P57739 230 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 RPS13P62277 151 aaKnown RBP8.87□□□□□ -0.99
ATG4A-202ENST00000345734 MRPS21P82921 87 aaKnown RBP8.87□□□□□ -0.99
ATG4A-202ENST00000345734 TFF2Q03403 129 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 C19orf57Q0VDD7 668 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 CBX3Q13185 183 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 E2F2Q14209 437 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 MAPKAPK3Q16644 382 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 GON4LQ3T8J9 2241 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 GTDC1Q4AE62 458 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 ATG9BQ674R7 924 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 KIAA1324Q6UXG2 1013 aaKnown RBP8.87□□□□□ -0.99
ATG4A-202ENST00000345734 C20orf204Q6ZNR8 217 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 NCCRP1Q6ZVX7 275 aaPredicted RBP8.87□□□□□ -0.99
ATG4A-202ENST00000345734 GALNT13Q8IUC8 556 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 DCUN1D3Q8IWE4 304 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 MSRB3Q8IXL7 192 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 KNL1Q8NG31 2342 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 OR2T34Q8NGX1 318 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 OR5K2Q8NHB8 316 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 SLC5A11Q8WWX8 675 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 RAD51AP1Q96B01 352 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 FCRL1Q96LA6 429 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 LRGUKQ96M69 825 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 OR52E6Q96RD3 313 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 APOOQ9BUR5 198 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 ACAT2Q9BWD1 397 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 FAM192AQ9GZU8 254 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 VCXQ9H320 206 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 OSGEPL1Q9H4B0 414 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 FBRSQ9HAH7 460 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 SLC6A13Q9NSD5 602 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 MOSPD1Q9UJG1 213 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 AP4S1Q9Y587 144 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 KCNH1O95259 989 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 C1GALT1C1LP0DN25 315 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 CDH1P12830 882 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 ACSL1P33121 698 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 EEFSECP57772 596 aaKnown RBP8.87□□□□□ -0.99
ATG4A-202ENST00000345734 OR4D2P58180 307 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 RAE1P78406 368 aaKnown RBP8.87□□□□□ -0.99
ATG4A-202ENST00000345734 BNIP2Q12982 314 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 PGS1Q32NB8 556 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 PRAMEF14Q5SWL7 426 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 OGFRL1Q5TC84 451 aaPredicted RBP8.87□□□□□ -0.99
ATG4A-202ENST00000345734 PRAMEF13Q5VWM6 474 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 MED27Q6P2C8 311 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 LRFN4Q6PJG9 635 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 ANKRD46Q86W74 232 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 RIMKLAQ8IXN7 391 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 ZNF740Q8NDX6 193 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 GPR156Q8NFN8 814 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 CDC26Q8NHZ8 85 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 ZUFSPQ96AP4 578 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 WDR34Q96EX3 536 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 INPP5KQ9BT40 448 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 KLHL4Q9C0H6 718 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 NRSN2Q9GZP1 204 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 IKZF5Q9H5V7 419 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 PREBQ9HCU5 417 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 SLC25A37Q9NYZ2 338 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 SLC17A4Q9Y2C5 497 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 PLXND1Q9Y4D7 1925 aa8.87□□□□□ -0.99
ATG4A-202ENST00000345734 USP34Q70CQ2 3546 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 ARHGEF17Q96PE2 2063 aaPredicted RBP8.86□□□□□ -0.99
ATG4A-202ENST00000345734 PIPSLA2A3N6 862 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 PRAMEF27A3QJZ7 478 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 POM121BA6NF01 834 aa8.86□□□□□ -0.99
ATG4A-202ENST00000345734 EIF4E1BA6NMX2 242 aaKnown RBP8.86□□□□□ -0.99
ATG4A-202ENST00000345734 GPR89AB7ZAQ6 455 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms