RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 SMIM35A0A1B0GVV1 85 aa18.81■□□□□ 0.6
HDAC4-201ENST00000345617 NARSO43776 548 aaKnown RBP18.81■□□□□ 0.6
HDAC4-201ENST00000345617 DPP6P42658 865 aa18.81■□□□□ 0.6
HDAC4-201ENST00000345617 TNFAIP8L2Q6P589 184 aaPredicted RBP18.81■□□□□ 0.6
HDAC4-201ENST00000345617 FOXRED2Q8IWF2 684 aa18.81■□□□□ 0.6
HDAC4-201ENST00000345617 BORCS8Q96FH0 119 aa18.81■□□□□ 0.6
HDAC4-201ENST00000345617 AKTIPQ9H8T0 292 aa18.81■□□□□ 0.6
HDAC4-201ENST00000345617 UBIAD1Q9Y5Z9 338 aa18.81■□□□□ 0.6
HDAC4-201ENST00000345617 TAS2R31P59538 309 aa18.81■□□□□ 0.6
HDAC4-201ENST00000345617 PDE12Q6L8Q7 609 aaKnown RBP18.81■□□□□ 0.6
HDAC4-201ENST00000345617 DEFB128Q7Z7B8 93 aa18.81■□□□□ 0.6
HDAC4-201ENST00000345617 SLC22A15Q8IZD6 547 aa18.81■□□□□ 0.6
HDAC4-201ENST00000345617 RIPOR3Q96MK2 946 aa18.81■□□□□ 0.6
HDAC4-201ENST00000345617 SYN3O14994 580 aa18.8■□□□□ 0.6
HDAC4-201ENST00000345617 OR4F21O95013 312 aa18.8■□□□□ 0.6
HDAC4-201ENST00000345617 S1PR1P21453 382 aa18.8■□□□□ 0.6
HDAC4-201ENST00000345617 ARL6IP1Q15041 203 aa18.8■□□□□ 0.6
HDAC4-201ENST00000345617 AKR1C8PQ5T2L2 129 aa18.8■□□□□ 0.6
HDAC4-201ENST00000345617 SMARCD2Q92925 531 aa18.8■□□□□ 0.6
HDAC4-201ENST00000345617 ADAD1Q96M93 576 aaKnown RBP18.8■□□□□ 0.6
HDAC4-201ENST00000345617 ORAI3Q9BRQ5 295 aa18.8■□□□□ 0.6
HDAC4-201ENST00000345617 SDHAF3Q9NRP4 125 aa18.8■□□□□ 0.6
HDAC4-201ENST00000345617 MEIS2O14770 477 aa18.8■□□□□ 0.6
HDAC4-201ENST00000345617 GSTM2P28161 218 aa18.8■□□□□ 0.6
HDAC4-201ENST00000345617 CORO1BQ9BR76 489 aa18.8■□□□□ 0.6
HDAC4-201ENST00000345617 PCDHAC1Q9H158 963 aa18.8■□□□□ 0.6
HDAC4-201ENST00000345617 C12orf71A8MTZ7 269 aa18.8■□□□□ 0.6
HDAC4-201ENST00000345617 NEDD8-MDP1E9PL57 170 aa18.8■□□□□ 0.6
HDAC4-201ENST00000345617 LGR5O75473 907 aa18.8■□□□□ 0.6
HDAC4-201ENST00000345617 GLT8D1Q68CQ7 371 aa18.8■□□□□ 0.6
HDAC4-201ENST00000345617 RGL4Q8IZJ4 473 aa18.8■□□□□ 0.6
HDAC4-201ENST00000345617 MFSD3Q96ES6 412 aa18.8■□□□□ 0.6
HDAC4-201ENST00000345617 RETREG1Q9H6L5 497 aa18.8■□□□□ 0.6
HDAC4-201ENST00000345617 MEGF6O75095 1541 aa18.8■□□□□ 0.6
HDAC4-201ENST00000345617 ETV6P41212 452 aa18.8■□□□□ 0.6
HDAC4-201ENST00000345617 KCTD9Q7L273 389 aa18.8■□□□□ 0.6
HDAC4-201ENST00000345617 ATP6V1C2Q8NEY4 427 aa18.8■□□□□ 0.6
HDAC4-201ENST00000345617 TMEM203Q969S6 136 aa18.8■□□□□ 0.6
HDAC4-201ENST00000345617 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.8■□□□□ 0.6
HDAC4-201ENST00000345617 H2AFB2P0C5Z0 115 aa18.8■□□□□ 0.6
HDAC4-201ENST00000345617 BLKP51451 505 aa18.8■□□□□ 0.6
HDAC4-201ENST00000345617 ARSFP54793 590 aa18.8■□□□□ 0.6
HDAC4-201ENST00000345617 CLCA4Q14CN2 919 aa18.8■□□□□ 0.6
HDAC4-201ENST00000345617 FAM86B1Q8N7N1 296 aa18.8■□□□□ 0.6
HDAC4-201ENST00000345617 TMEM14AQ9Y6G1 99 aa18.8■□□□□ 0.6
HDAC4-201ENST00000345617 CDK14O94921 469 aa18.8■□□□□ 0.6
HDAC4-201ENST00000345617 XRCC1P18887 633 aaPredicted RBP18.8■□□□□ 0.6
HDAC4-201ENST00000345617 UGT2A3Q6UWM9 527 aa18.8■□□□□ 0.6
HDAC4-201ENST00000345617 ZNF598Q86UK7 904 aaKnown RBP18.8■□□□□ 0.6
HDAC4-201ENST00000345617 C17orf113A0A1B0GUU1 675 aa18.8■□□□□ 0.6
HDAC4-201ENST00000345617 OVCA2Q8WZ82 227 aa18.8■□□□□ 0.6
HDAC4-201ENST00000345617 KREMEN1Q96MU8 473 aa18.8■□□□□ 0.6
HDAC4-201ENST00000345617 NKX1-2Q9UD57 310 aaPredicted RBP18.8■□□□□ 0.6
HDAC4-201ENST00000345617 NME7Q9Y5B8 376 aa18.8■□□□□ 0.6
HDAC4-201ENST00000345617 CREG1O75629 220 aa18.79■□□□□ 0.6
HDAC4-201ENST00000345617 ENGP17813 658 aa18.79■□□□□ 0.6
HDAC4-201ENST00000345617 BORCS7Q96B45 105 aa18.79■□□□□ 0.6
HDAC4-201ENST00000345617 A0A1W2PRB8 838 aa18.79■□□□□ 0.6
HDAC4-201ENST00000345617 SLC15A5A6NIM6 579 aa18.79■□□□□ 0.6
HDAC4-201ENST00000345617 SLC6A6P31641 620 aa18.79■□□□□ 0.6
HDAC4-201ENST00000345617 DHCR24Q15392 516 aa18.79■□□□□ 0.6
HDAC4-201ENST00000345617 TRPM6Q9BX84 2022 aa18.79■□□□□ 0.6
HDAC4-201ENST00000345617 CIB4A0PJX0 185 aa18.79■□□□□ 0.6
HDAC4-201ENST00000345617 TISP43B9A030 160 aa18.79■□□□□ 0.6
HDAC4-201ENST00000345617 C9IYK1 514 aa18.79■□□□□ 0.6
HDAC4-201ENST00000345617 POLR1CO15160 346 aaPredicted RBP18.79■□□□□ 0.6
HDAC4-201ENST00000345617 RAD51DO75771 328 aa18.79■□□□□ 0.6
HDAC4-201ENST00000345617 BCKDHAP12694 445 aa18.79■□□□□ 0.6
HDAC4-201ENST00000345617 GJA9P57773 515 aa18.79■□□□□ 0.6
HDAC4-201ENST00000345617 KCNC3Q14003 757 aa18.79■□□□□ 0.6
HDAC4-201ENST00000345617 HMGN3Q15651 99 aa18.79■□□□□ 0.6
HDAC4-201ENST00000345617 LIN37Q96GY3 246 aaPredicted RBP18.79■□□□□ 0.6
HDAC4-201ENST00000345617 GFOD2Q3B7J2 385 aa18.79■□□□□ 0.6
HDAC4-201ENST00000345617 ARL6Q9H0F7 186 aa18.79■□□□□ 0.6
HDAC4-201ENST00000345617 GPN2Q9H9Y4 310 aaPredicted RBP18.79■□□□□ 0.6
HDAC4-201ENST00000345617 MGAT4CQ9UBM8 478 aa18.79■□□□□ 0.6
HDAC4-201ENST00000345617 KLRK1P26718 216 aa18.79■□□□□ 0.6
HDAC4-201ENST00000345617 CD6P30203 668 aa18.79■□□□□ 0.6
HDAC4-201ENST00000345617 TNS2Q63HR2 1409 aa18.79■□□□□ 0.6
HDAC4-201ENST00000345617 ANKRD23Q86SG2 305 aa18.79■□□□□ 0.6
HDAC4-201ENST00000345617 BEST4Q8NFU0 473 aa18.79■□□□□ 0.6
HDAC4-201ENST00000345617 SLC32A1Q9H598 525 aa18.79■□□□□ 0.6
HDAC4-201ENST00000345617 RPH3AQ9Y2J0 694 aaPredicted RBP18.79■□□□□ 0.6
HDAC4-201ENST00000345617 SVILO95425 2214 aa18.79■□□□□ 0.6
HDAC4-201ENST00000345617 CSNK2A2P19784 350 aaPredicted RBP18.79■□□□□ 0.6
HDAC4-201ENST00000345617 MAPK15Q8TD08 544 aa18.79■□□□□ 0.6
HDAC4-201ENST00000345617 CHRNA1P02708 482 aa18.79■□□□□ 0.6
HDAC4-201ENST00000345617 CAPSQ13938 189 aa18.79■□□□□ 0.6
HDAC4-201ENST00000345617 TOR1AIP1Q5JTV8 583 aa18.79■□□□□ 0.6
HDAC4-201ENST00000345617 HNRNPABQ99729 332 aaKnown RBP18.79■□□□□ 0.6
HDAC4-201ENST00000345617 PTTG3PQ9NZH4 202 aa18.79■□□□□ 0.6
HDAC4-201ENST00000345617 C2CD4BA6NLJ0 364 aa18.78■□□□□ 0.6
HDAC4-201ENST00000345617 J3QRK9 145 aa18.78■□□□□ 0.6
HDAC4-201ENST00000345617 SCAF4O95104 1147 aaKnown RBP18.78■□□□□ 0.6
HDAC4-201ENST00000345617 VEGFCP49767 419 aa18.78■□□□□ 0.6
HDAC4-201ENST00000345617 OTOP3Q7RTS5 596 aa18.78■□□□□ 0.6
HDAC4-201ENST00000345617 CACUL1Q86Y37 369 aa18.78■□□□□ 0.6
HDAC4-201ENST00000345617 FBXL8Q96CD0 374 aa18.78■□□□□ 0.6
HDAC4-201ENST00000345617 PPA2Q9H2U2 334 aa18.78■□□□□ 0.6
HDAC4-201ENST00000345617 GBA2Q9HCG7 927 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms