RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 MLF2Q15773 248 aaPredicted RBP12.34□□□□□ -0.43
CLK3-201ENST00000345005 PYCR3Q53H96 274 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 ZNF852Q6ZMS4 543 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 LRRC56Q8IYG6 542 aaPredicted RBP12.34□□□□□ -0.43
CLK3-201ENST00000345005 OR5AR1Q8NGP9 310 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 OR5K2Q8NHB8 316 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 REPS1Q96D71 796 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 TEX37Q96LM6 180 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 ZBTB18Q99592 522 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 ING2Q9H160 280 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 TRIT1Q9H3H1 467 aaKnown RBP12.34□□□□□ -0.43
CLK3-201ENST00000345005 FZD3Q9NPG1 666 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 CCDC177Q9NQR7 707 aaPredicted RBP12.34□□□□□ -0.43
CLK3-201ENST00000345005 ATAD3AQ9NVI7 634 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 IFT80Q9P2H3 777 aaPredicted RBP12.34□□□□□ -0.43
CLK3-201ENST00000345005 ERGIC3Q9Y282 383 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 FXYD1O00168 92 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 ANKRD28O15084 1053 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 MAGEB3O15480 346 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 SULT1C4O75897 302 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 SEC24DO94855 1032 aaPredicted RBP12.34□□□□□ -0.43
CLK3-201ENST00000345005 ALOX5P09917 674 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 ACP5P13686 325 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 HSD3B1P14060 373 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 CDH3P22223 829 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 HSD3B2P26439 372 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 ACSL1P33121 698 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 CLCNKAP51800 687 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 DGKEP52429 567 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 TAP2Q03519 686 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 LIPEQ05469 1076 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 ZNF846Q147U1 533 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 LEXMQ3ZCV2 418 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 C10orf62Q5T681 223 aaPredicted RBP12.34□□□□□ -0.43
CLK3-201ENST00000345005 SLCO4C1Q6ZQN7 724 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 THAP5Q7Z6K1 395 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 PIAS4Q8N2W9 510 aaPredicted RBP12.34□□□□□ -0.43
CLK3-201ENST00000345005 CENPSQ8N2Z9 138 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 SYNPOQ8N3V7 929 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 LIX1Q8N485 282 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 GLB1L3Q8NCI6 653 aaPredicted RBP12.34□□□□□ -0.43
CLK3-201ENST00000345005 MAGEE2Q8TD90 523 aaPredicted RBP12.34□□□□□ -0.43
CLK3-201ENST00000345005 HMGB4Q8WW32 186 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 NEIL2Q969S2 332 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 WDR34Q96EX3 536 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 METTL2AQ96IZ6 378 aaKnown RBP12.34□□□□□ -0.43
CLK3-201ENST00000345005 UGT2B28Q9BY64 529 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 WDR12Q9GZL7 423 aaKnown RBP12.34□□□□□ -0.43
CLK3-201ENST00000345005 EHD1Q9H4M9 534 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 MOSPD1Q9UJG1 213 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 TDRKHQ9Y2W6 561 aaKnown RBP12.34□□□□□ -0.43
CLK3-201ENST00000345005 PCDHB3Q9Y5E6 796 aa12.34□□□□□ -0.43
CLK3-201ENST00000345005 A0A1W2PPW3 197 aa12.33□□□□□ -0.44
CLK3-201ENST00000345005 C9JVG2 144 aa12.33□□□□□ -0.44
CLK3-201ENST00000345005 PRSS23O95084 383 aa12.33□□□□□ -0.44
CLK3-201ENST00000345005 PRPS2P11908 318 aa12.33□□□□□ -0.44
CLK3-201ENST00000345005 ACPPP15309 386 aa12.33□□□□□ -0.44
CLK3-201ENST00000345005 CD22P20273 847 aa12.33□□□□□ -0.44
CLK3-201ENST00000345005 IDSP22304 550 aa12.33□□□□□ -0.44
CLK3-201ENST00000345005 HNRNPA2B1P22626 353 aaKnown RBP12.33□□□□□ -0.44
CLK3-201ENST00000345005 IL12AP29459 219 aa12.33□□□□□ -0.44
CLK3-201ENST00000345005 LAPTM5Q13571 262 aa12.33□□□□□ -0.44
CLK3-201ENST00000345005 TSTA3Q13630 321 aaPredicted RBP12.33□□□□□ -0.44
CLK3-201ENST00000345005 KIAA0040Q15053 153 aa12.33□□□□□ -0.44
CLK3-201ENST00000345005 HIST2H2ACQ16777 129 aaPredicted RBP12.33□□□□□ -0.44
CLK3-201ENST00000345005 FAM98BQ52LJ0 330 aaKnown RBP12.33□□□□□ -0.44
CLK3-201ENST00000345005 PAGE2BQ5JRK9 111 aa12.33□□□□□ -0.44
CLK3-201ENST00000345005 ATG9BQ674R7 924 aa12.33□□□□□ -0.44
CLK3-201ENST00000345005 HIST2H2AA3Q6FI13 130 aa12.33□□□□□ -0.44
CLK3-201ENST00000345005 PTCRAQ6ISU1 281 aaPredicted RBP12.33□□□□□ -0.44
CLK3-201ENST00000345005 TMEM26Q6ZUK4 368 aa12.33□□□□□ -0.44
CLK3-201ENST00000345005 HID1Q8IV36 788 aa12.33□□□□□ -0.44
CLK3-201ENST00000345005 PGBD3Q8N328 593 aa12.33□□□□□ -0.44
CLK3-201ENST00000345005 DPP10Q8N608 796 aa12.33□□□□□ -0.44
CLK3-201ENST00000345005 ZNF555Q8NEP9 628 aa12.33□□□□□ -0.44
CLK3-201ENST00000345005 WDR20Q8TBZ3 569 aa12.33□□□□□ -0.44
CLK3-201ENST00000345005 EFHD2Q96C19 240 aaPredicted RBP12.33□□□□□ -0.44
CLK3-201ENST00000345005 NSMCE2Q96MF7 247 aa12.33□□□□□ -0.44
CLK3-201ENST00000345005 ZNF347Q96SE7 839 aa12.33□□□□□ -0.44
CLK3-201ENST00000345005 MYOCQ99972 504 aa12.33□□□□□ -0.44
CLK3-201ENST00000345005 SLC39A3Q9BRY0 314 aa12.33□□□□□ -0.44
CLK3-201ENST00000345005 EFCAB11Q9BUY7 163 aa12.33□□□□□ -0.44
CLK3-201ENST00000345005 DPY30Q9C005 99 aa12.33□□□□□ -0.44
CLK3-201ENST00000345005 OSGEPL1Q9H4B0 414 aa12.33□□□□□ -0.44
CLK3-201ENST00000345005 RAD21L1Q9H4I0 556 aa12.33□□□□□ -0.44
CLK3-201ENST00000345005 BRF2Q9HAW0 419 aa12.33□□□□□ -0.44
CLK3-201ENST00000345005 IL1RL2Q9HB29 575 aa12.33□□□□□ -0.44
CLK3-201ENST00000345005 HMG20AQ9NP66 347 aa12.33□□□□□ -0.44
CLK3-201ENST00000345005 USP36Q9P275 1121 aaKnown RBP12.33□□□□□ -0.44
CLK3-201ENST00000345005 EGFL7Q9UHF1 273 aa12.33□□□□□ -0.44
CLK3-201ENST00000345005 GPSM3Q9Y4H4 160 aa12.33□□□□□ -0.44
CLK3-201ENST00000345005 HEATR5BQ9P2D3 2071 aa12.32□□□□□ -0.44
CLK3-201ENST00000345005 POM121BA6NF01 834 aa12.32□□□□□ -0.44
CLK3-201ENST00000345005 APBB3O95704 486 aa12.32□□□□□ -0.44
CLK3-201ENST00000345005 SEMA4FO95754 770 aa12.32□□□□□ -0.44
CLK3-201ENST00000345005 C1GALT1C1LP0DN25 315 aa12.32□□□□□ -0.44
CLK3-201ENST00000345005 RAP2AP10114 183 aa12.32□□□□□ -0.44
CLK3-201ENST00000345005 CHRNB1P11230 501 aa12.32□□□□□ -0.44
CLK3-201ENST00000345005 ERGP11308 486 aa12.32□□□□□ -0.44
CLK3-201ENST00000345005 BCKDHAP12694 445 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms