RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 PPP5CP53041 499 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 PPIGQ13427 754 aaKnown RBP eCLIP12□□□□□ -0.497e-6■■□□□ 12.3
SNRNP48-201ENST00000342415 DPY19L3Q6ZPD9 716 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 TPRG1Q6ZUI0 275 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 BTLAQ7Z6A9 289 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 IZUMO1Q8IYV9 350 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 ADAM30Q9UKF2 790 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 SLC30A4O14863 429 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 SSNA1O43805 119 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 PRG2P13727 222 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 SDC1P18827 310 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 ETV3P41162 512 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 ZNF140P52738 457 aaPredicted RBP12□□□□□ -0.49
SNRNP48-201ENST00000342415 FAM214AQ32MH5 1076 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 DESI1Q6ICB0 168 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 CDC73Q6P1J9 531 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 CEP68Q76N32 757 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 NPAS4Q8IUM7 802 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 LKAAEAR1Q8TD35 194 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 TRIB2Q92519 343 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 RHBDF1Q96CC6 855 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 CMTM7Q96FZ5 175 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 ZNF419Q96HQ0 510 aaPredicted RBP12□□□□□ -0.49
SNRNP48-201ENST00000342415 MGME1Q9BQP7 344 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 OR51V1Q9H2C8 321 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 MMP27Q9H306 513 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 IKZF5Q9H5V7 419 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 TAS2R16Q9NYV7 291 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 ISM1B1AKI9 464 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 BTN3A3O00478 584 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 PRAMEF12O95522 483 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 CXCL14O95715 111 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 PRKAR1AP10644 381 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 AVPR1BP47901 424 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 RNF144AP50876 292 aaPredicted RBP12□□□□□ -0.49
SNRNP48-201ENST00000342415 RORCP51449 518 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 CD300CQ08708 224 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 TBRG1Q3YBR2 411 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 NADSYN1Q6IA69 706 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 ELMSAN1Q6PJG2 1045 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 RFLNAQ6ZTI6 216 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 ZSCAN2Q7Z7L9 614 aaPredicted RBP12□□□□□ -0.49
SNRNP48-201ENST00000342415 FOXJ1Q92949 421 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 PEX13Q92968 403 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 USP7Q93009 1102 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 TADA1Q96BN2 335 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 MYEOVQ96EZ4 313 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 TMED9Q9BVK6 235 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 TMEM106CQ9BVX2 250 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 AMBRA1Q9C0C7 1298 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 BEX1Q9HBH7 125 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 CCDC177Q9NQR7 707 aaPredicted RBP12□□□□□ -0.49
SNRNP48-201ENST00000342415 MRPL39Q9NYK5 338 aaKnown RBP12□□□□□ -0.49
SNRNP48-201ENST00000342415 LAMB2P55268 1798 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 MCM3APO60318 1980 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 CTDSP2O14595 271 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 AP3D1O14617 1153 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 ADAM12O43184 909 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 WBP4O75554 376 aaKnown RBP12□□□□□ -0.49
SNRNP48-201ENST00000342415 HPRP00739 348 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 VLDLRP98155 873 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 PCDH1Q08174 1060 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 MTAPQ13126 283 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 B3GNT8Q7Z7M8 397 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 CDK20Q8IZL9 346 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 IL17FQ96PD4 163 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 SLC29A3Q9BZD2 475 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 CLEC4MQ9H2X3 399 aaPredicted RBP12□□□□□ -0.49
SNRNP48-201ENST00000342415 POFUT2Q9Y2G5 429 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 H0YC42 278 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 M0QZQ0 153 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 WNT9AO14904 365 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 GRM6O15303 877 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 TSPAN6O43657 245 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 FHP07954 510 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 C8orf89P0DMQ9 161 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 BMP4P12644 408 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 RYKP34925 604 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 PYCR3Q53H96 274 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 C11orf88Q6PI97 169 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 HOMEZQ8IX15 550 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 TMCO6Q96DC7 493 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 FERD3LQ96RJ6 166 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 THG1LQ9NWX6 298 aaKnown RBP11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 PAQR5Q9NXK6 330 aaPredicted RBP11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 ING3Q9NXR8 418 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 EP400Q96L91 3159 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 NHSL1Q5SYE7 1610 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 ZNF701M0R085 212 aaPredicted RBP11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 BMP7P18075 431 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 ACRV1P26436 265 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 SSTR4P31391 388 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 STX4Q12846 297 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 KCNJ8Q15842 424 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 DEFB115Q30KQ5 88 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 CLLU1OSQ5K130 101 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 THOC7Q6I9Y2 204 aaKnown RBP11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 MACC1Q6ZN28 852 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 TAS1R1Q7RTX1 841 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms