RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 GTF2H4Q92759 462 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 EGLN2Q96KS0 407 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 C12orf66Q96MD2 445 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 PTPN18Q99952 460 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 PAAF1Q9BRP4 392 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 RHBGQ9H310 441 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 RNF121Q9H920 327 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 ACSL6Q9UKU0 697 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 WNT9AO14904 365 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 CLDN7O95471 211 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 CNR2P34972 360 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 ZNF33AQ06730 810 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 CBLBQ13191 982 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 LRRC26Q2I0M4 334 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 NOXRED1Q6NXP6 359 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 FAM20CQ8IXL6 584 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 TOMM5Q8N4H5 51 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 FAM46DQ8NEK8 389 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 FYTTD1Q96QD9 318 aaKnown RBP12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 RHNO1Q9BSD3 238 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 CD244Q9BZW8 370 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 PADI3Q9ULW8 664 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 COL1A2P08123 1366 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 A0A1B0GVC2 190 aa12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 A6NIN4 97 aa12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 PTX3P26022 381 aaPredicted RBP12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 GMFBP60983 142 aa12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 SNRPD1P62314 119 aaKnown RBP12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 ZNF367Q7RTV3 350 aa12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 GEMIN6Q8WXD5 167 aaKnown RBP12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 COMMD9Q9P000 198 aa12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 RBPJLQ9UBG7 517 aa12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 TLR6Q9Y2C9 796 aa12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 SMAD9O15198 467 aaKnown RBP12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 NTSP30990 170 aa12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 LIPAP38571 399 aa12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 RPL3P39023 403 aaKnown RBP12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 ASB15Q8WXK1 588 aa12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 IGSF8Q969P0 613 aa12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 TUBB1Q9H4B7 451 aa12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 GJD2Q9UKL4 321 aa12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 EBLN1P0CF75 366 aa12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 GKP32189 559 aa12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 RGS6P49758 472 aa12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 SCAPQ12770 1279 aa12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 CCSAPQ6IQ19 270 aaPredicted RBP12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 ANKRD54Q6NXT1 300 aa12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 FAM180BQ6P0A1 224 aa12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 MTSS1LQ765P7 747 aa12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 SHFQ7M4L6 423 aa12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 MAPKAP1Q9BPZ7 522 aa12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 CCDC32Q9BV29 185 aa12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 SMOC2Q9H3U7 446 aa12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 TJP1Q07157 1748 aa12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 GJB3O75712 270 aa12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 C6orf47O95873 294 aa12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 DNASE1P24855 282 aa12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 MAPKAPK2P49137 400 aa12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 TSPAN5P62079 268 aa12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 PPP2R2BQ00005 443 aa12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 LINGO2Q7L985 606 aa12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 VWA5B2Q8N398 1253 aa12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 GTF3C2Q8WUA4 911 aaPredicted RBP12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 USP7Q93009 1102 aa12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 ATOH8Q96SQ7 321 aa12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 GTPBP2Q9BX10 602 aaKnown RBP12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 TREX1Q9NSU2 369 aa12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 NAV1Q8NEY1 1877 aa12.11□□□□□ -0.47
SSX2IP-201ENST00000342203 C2orf92A0A1B0GVN3 265 aa12.1□□□□□ -0.47
SSX2IP-201ENST00000342203 H1F0P07305 194 aaKnown RBP12.1□□□□□ -0.47
SSX2IP-201ENST00000342203 SBK3P0C264 359 aa12.1□□□□□ -0.47
SSX2IP-201ENST00000342203 PRKACAP17612 351 aa12.1□□□□□ -0.47
SSX2IP-201ENST00000342203 EIF2DP41214 584 aaKnown RBP12.1□□□□□ -0.47
SSX2IP-201ENST00000342203 SF1Q15637 639 aaKnown RBP12.1□□□□□ -0.47
SSX2IP-201ENST00000342203 KLHL22Q53GT1 634 aa12.1□□□□□ -0.47
SSX2IP-201ENST00000342203 C9orf64Q5T6V5 341 aa12.1□□□□□ -0.47
SSX2IP-201ENST00000342203 KCTD11Q693B1 232 aa12.1□□□□□ -0.47
SSX2IP-201ENST00000342203 NPAS3Q8IXF0 933 aa12.1□□□□□ -0.47
SSX2IP-201ENST00000342203 PIANPQ8IYJ0 282 aa12.1□□□□□ -0.47
SSX2IP-201ENST00000342203 IGKV6-21A0A0C4DH24 114 aa12.1□□□□□ -0.47
SSX2IP-201ENST00000342203 FXYD1O00168 92 aa12.1□□□□□ -0.47
SSX2IP-201ENST00000342203 CHST10O43529 356 aa12.1□□□□□ -0.47
SSX2IP-201ENST00000342203 OR1D2P34982 312 aa12.1□□□□□ -0.47
SSX2IP-201ENST00000342203 ADAM15Q13444 863 aa12.1□□□□□ -0.47
SSX2IP-201ENST00000342203 DHRS4L2Q6PKH6 230 aa12.1□□□□□ -0.47
SSX2IP-201ENST00000342203 GPR142Q7Z601 462 aa12.1□□□□□ -0.47
SSX2IP-201ENST00000342203 RBM23Q86U06 439 aaKnown RBP12.1□□□□□ -0.47
SSX2IP-201ENST00000342203 RNF130Q86XS8 419 aa12.1□□□□□ -0.47
SSX2IP-201ENST00000342203 YIPF7Q8N8F6 280 aa12.1□□□□□ -0.47
SSX2IP-201ENST00000342203 ATP6V1C2Q8NEY4 427 aa12.1□□□□□ -0.47
SSX2IP-201ENST00000342203 COQ8AQ8NI60 647 aa12.1□□□□□ -0.47
SSX2IP-201ENST00000342203 FUZQ9BT04 418 aa12.1□□□□□ -0.47
SSX2IP-201ENST00000342203 PAK6Q9NQU5 681 aaPredicted RBP12.1□□□□□ -0.47
SSX2IP-201ENST00000342203 MBD2Q9UBB5 411 aa12.1□□□□□ -0.47
SSX2IP-201ENST00000342203 FXYD6-FXYD2A0A087WZ82 144 aa12.1□□□□□ -0.47
SSX2IP-201ENST00000342203 M0R233 179 aa12.1□□□□□ -0.47
SSX2IP-201ENST00000342203 USP2O75604 605 aaPredicted RBP12.1□□□□□ -0.47
SSX2IP-201ENST00000342203 ETFAP13804 333 aa12.1□□□□□ -0.47
SSX2IP-201ENST00000342203 MAN2A2P49641 1150 aa12.1□□□□□ -0.47
SSX2IP-201ENST00000342203 MLLT1Q03111 559 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms