RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 DKK4Q9UBT3 224 aa12.57□□□□□ -0.4
TUBD1-202ENST00000340993 CTSFQ9UBX1 484 aa12.57□□□□□ -0.4
TUBD1-202ENST00000340993 ZNF490Q9ULM2 529 aaPredicted RBP12.57□□□□□ -0.4
TUBD1-202ENST00000340993 FIS1Q9Y3D6 152 aa12.57□□□□□ -0.4
TUBD1-202ENST00000340993 ANKDD1BA6NHY2 528 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 AGPSO00116 658 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 RDH16O75452 317 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 TGFB1P01137 390 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 PLA2G16P53816 162 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 PRKAA2P54646 552 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 DCDP81605 110 aaKnown RBP12.56□□□□□ -0.4
TUBD1-202ENST00000340993 CLCQ05315 142 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 ABHD18Q0P651 414 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 DNASE1L3Q13609 305 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 ERV3-1Q14264 604 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 PCLAFQ15004 111 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 HIST2H2ACQ16777 129 aaPredicted RBP12.56□□□□□ -0.4
TUBD1-202ENST00000340993 NKAIN1Q4KMZ8 207 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 DEFB134Q4QY38 66 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 CFAP157Q5JU67 520 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 TTC19Q6DKK2 380 aaPredicted RBP12.56□□□□□ -0.4
TUBD1-202ENST00000340993 HIST2H2AA3Q6FI13 130 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 RHBDD2Q6NTF9 364 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 FAM198BQ6UWH4 519 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 VN1R5Q7Z5H4 357 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 CAMKVQ8NCB2 501 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 OR4F6Q8NGB9 312 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 OR5T3Q8NGG3 340 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 AGR3Q8TD06 166 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 ZNF483Q8TF39 744 aaPredicted RBP12.56□□□□□ -0.4
TUBD1-202ENST00000340993 ZNF285Q96NJ3 590 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 KCNA7Q96RP8 456 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 AICDAQ9GZX7 198 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 DRC3Q9H069 523 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 RHBGQ9H310 441 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 SOX17Q9H6I2 414 aaPredicted RBP12.56□□□□□ -0.4
TUBD1-202ENST00000340993 COPG2Q9UBF2 871 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 ZFP69BQ9UJL9 534 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 SRPK3Q9UPE1 567 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 FITM1A5D6W6 292 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 TMEM8BA6NDV4 472 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 DSCR3O14972 297 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 EFSO43281 561 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 DNAJB6O75190 326 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 SASH3O75995 380 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 OR4F21O95013 312 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 AGXTP21549 392 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 ALDH3A1P30838 453 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 HNRNPH1P31943 449 aaKnown RBP12.56□□□□□ -0.4
TUBD1-202ENST00000340993 ARSFP54793 590 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 RGS1Q08116 209 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 TRAF3Q13114 568 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 MUM1Q2TAK8 710 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 MFSD4BQ5TF39 518 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 LETMD1Q6P1Q0 360 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 MED27Q6P2C8 311 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 HDXQ7Z353 690 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 MILR1Q7Z6M3 343 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 LCA5Q86VQ0 697 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 PDSS2Q86YH6 399 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 CDYL2Q8N8U2 506 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 F2RL3Q96RI0 385 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 CCNL2Q96S94 520 aaPredicted RBP12.56□□□□□ -0.4
TUBD1-202ENST00000340993 SORBS1Q9BX66 1292 aaKnown RBP12.56□□□□□ -0.4
TUBD1-202ENST00000340993 CAPS2Q9BXY5 557 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 ACTL8Q9H568 366 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 TMBIM4Q9HC24 238 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 SLC22A11Q9NSA0 550 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 GPN3Q9UHW5 284 aaPredicted RBP12.56□□□□□ -0.4
TUBD1-202ENST00000340993 ACSL6Q9UKU0 697 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 NAALAD2Q9Y3Q0 740 aa12.56□□□□□ -0.4
TUBD1-202ENST00000340993 BOD1L1Q8NFC6 3051 aa12.55□□□□□ -0.4
TUBD1-202ENST00000340993 CCDC189A1A4V9 331 aa12.55□□□□□ -0.4
TUBD1-202ENST00000340993 OR2W5A6NFC9 320 aa12.55□□□□□ -0.4
TUBD1-202ENST00000340993 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.55□□□□□ -0.4
TUBD1-202ENST00000340993 C9J4A7 227 aa12.55□□□□□ -0.4
TUBD1-202ENST00000340993 RTCAO00442 366 aaKnown RBP12.55□□□□□ -0.4
TUBD1-202ENST00000340993 NKX2-8O15522 239 aa12.55□□□□□ -0.4
TUBD1-202ENST00000340993 PRPF4O43172 522 aaKnown RBP eCLIP12.55□□□□□ -0.4
TUBD1-202ENST00000340993 FOXS1O43638 330 aa12.55□□□□□ -0.4
TUBD1-202ENST00000340993 TYROBPO43914 113 aa12.55□□□□□ -0.4
TUBD1-202ENST00000340993 CDC123O75794 336 aaPredicted RBP12.55□□□□□ -0.4
TUBD1-202ENST00000340993 WFS1O76024 890 aa12.55□□□□□ -0.4
TUBD1-202ENST00000340993 CLDN9O95484 217 aa12.55□□□□□ -0.4
TUBD1-202ENST00000340993 HBQ1P09105 142 aa12.55□□□□□ -0.4
TUBD1-202ENST00000340993 FBLP22087 321 aaKnown RBP12.55□□□□□ -0.4
TUBD1-202ENST00000340993 CXCR2P25025 360 aa12.55□□□□□ -0.4
TUBD1-202ENST00000340993 HPDP32754 393 aaPredicted RBP12.55□□□□□ -0.4
TUBD1-202ENST00000340993 MPP2Q14168 576 aa12.55□□□□□ -0.4
TUBD1-202ENST00000340993 ZRSR2Q15696 482 aaKnown RBP12.55□□□□□ -0.4
TUBD1-202ENST00000340993 FAM214AQ32MH5 1076 aa12.55□□□□□ -0.4
TUBD1-202ENST00000340993 PAGE2BQ5JRK9 111 aa12.55□□□□□ -0.4
TUBD1-202ENST00000340993 BROXQ5VW32 411 aa12.55□□□□□ -0.4
TUBD1-202ENST00000340993 ZNF385CQ66K41 422 aaPredicted RBP12.55□□□□□ -0.4
TUBD1-202ENST00000340993 GRHL2Q6ISB3 625 aa12.55□□□□□ -0.4
TUBD1-202ENST00000340993 SCIMPQ6UWF3 145 aa12.55□□□□□ -0.4
TUBD1-202ENST00000340993 CCDC81Q6ZN84 652 aa12.55□□□□□ -0.4
TUBD1-202ENST00000340993 SYVN1Q86TM6 617 aa12.55□□□□□ -0.4
TUBD1-202ENST00000340993 SLC22A9Q8IVM8 553 aa12.55□□□□□ -0.4
TUBD1-202ENST00000340993 HUS1BQ8NHY5 278 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms