RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 KLK1P06870 262 aa16.59■□□□□ 0.25
CLDN4-201ENST00000340958 PRPS1L1P21108 318 aa16.59■□□□□ 0.25
CLDN4-201ENST00000340958 GSTM2P28161 218 aa16.59■□□□□ 0.25
CLDN4-201ENST00000340958 ASMTP46597 345 aa16.59■□□□□ 0.25
CLDN4-201ENST00000340958 DGKQP52824 942 aa16.59■□□□□ 0.25
CLDN4-201ENST00000340958 RPS15AP62244 130 aaKnown RBP16.59■□□□□ 0.25
CLDN4-201ENST00000340958 SLC5A12Q1EHB4 618 aa16.59■□□□□ 0.25
CLDN4-201ENST00000340958 HKDC1Q2TB90 917 aa16.59■□□□□ 0.25
CLDN4-201ENST00000340958 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.59■□□□□ 0.25
CLDN4-201ENST00000340958 DEPDC1Q5TB30 811 aa16.59■□□□□ 0.25
CLDN4-201ENST00000340958 BNC2Q6ZN30 1099 aaPredicted RBP16.59■□□□□ 0.25
CLDN4-201ENST00000340958 RIPOR1Q6ZS17 1223 aa16.59■□□□□ 0.25
CLDN4-201ENST00000340958 PAGE2Q7Z2X7 111 aa16.59■□□□□ 0.25
CLDN4-201ENST00000340958 PAQR7Q86WK9 346 aa16.59■□□□□ 0.25
CLDN4-201ENST00000340958 MFSD9Q8NBP5 474 aa16.59■□□□□ 0.25
CLDN4-201ENST00000340958 RSC1A1Q92681 617 aa16.59■□□□□ 0.25
CLDN4-201ENST00000340958 LOXL4Q96JB6 756 aa16.59■□□□□ 0.25
CLDN4-201ENST00000340958 CLPTM1LQ96KA5 538 aa16.59■□□□□ 0.25
CLDN4-201ENST00000340958 MS4A8Q9BY19 250 aa16.59■□□□□ 0.25
CLDN4-201ENST00000340958 REXO4Q9GZR2 422 aaKnown RBP16.59■□□□□ 0.25
CLDN4-201ENST00000340958 CLMPQ9H6B4 373 aa16.59■□□□□ 0.25
CLDN4-201ENST00000340958 CSNK1G3Q9Y6M4 447 aa16.59■□□□□ 0.25
CLDN4-201ENST00000340958 KNL1Q8NG31 2342 aa16.59■□□□□ 0.25
CLDN4-201ENST00000340958 A0A0J9YY10 115 aa16.58■□□□□ 0.24
CLDN4-201ENST00000340958 EEDO75530 441 aaKnown RBP16.58■□□□□ 0.24
CLDN4-201ENST00000340958 HOXB3P14651 431 aaPredicted RBP16.58■□□□□ 0.24
CLDN4-201ENST00000340958 S100A3P33764 101 aa16.58■□□□□ 0.24
CLDN4-201ENST00000340958 AHRP35869 848 aa16.58■□□□□ 0.24
CLDN4-201ENST00000340958 HPCAL1P37235 193 aa16.58■□□□□ 0.24
CLDN4-201ENST00000340958 PI4KAP42356 2102 aa16.58■□□□□ 0.24
CLDN4-201ENST00000340958 PSME3P61289 254 aa16.58■□□□□ 0.24
CLDN4-201ENST00000340958 CCDC6Q16204 474 aa16.58■□□□□ 0.24
CLDN4-201ENST00000340958 DUOXA1Q1HG43 343 aa16.58■□□□□ 0.24
CLDN4-201ENST00000340958 ZNF423Q2M1K9 1284 aa16.58■□□□□ 0.24
CLDN4-201ENST00000340958 COQ5Q5HYK3 327 aa16.58■□□□□ 0.24
CLDN4-201ENST00000340958 C6orf132Q5T0Z8 1188 aa16.58■□□□□ 0.24
CLDN4-201ENST00000340958 CCNYL2Q5T2Q4 361 aa16.58■□□□□ 0.24
CLDN4-201ENST00000340958 ZNF425Q6IV72 752 aa16.58■□□□□ 0.24
CLDN4-201ENST00000340958 IRGCQ6NXR0 463 aa16.58■□□□□ 0.24
CLDN4-201ENST00000340958 FIGLAQ6QHK4 219 aa16.58■□□□□ 0.24
CLDN4-201ENST00000340958 RABEPKQ7Z6M1 372 aa16.58■□□□□ 0.24
CLDN4-201ENST00000340958 METTL4Q8N3J2 472 aa16.58■□□□□ 0.24
CLDN4-201ENST00000340958 WDR48Q8TAF3 677 aa16.58■□□□□ 0.24
CLDN4-201ENST00000340958 NUDT8Q8WV74 236 aa16.58■□□□□ 0.24
CLDN4-201ENST00000340958 STARD8Q92502 1023 aa16.58■□□□□ 0.24
CLDN4-201ENST00000340958 ZUFSPQ96AP4 578 aa16.58■□□□□ 0.24
CLDN4-201ENST00000340958 RGMAQ96B86 450 aa16.58■□□□□ 0.24
CLDN4-201ENST00000340958 AHCYL2Q96HN2 611 aaKnown RBP16.58■□□□□ 0.24
CLDN4-201ENST00000340958 EGLN2Q96KS0 407 aa16.58■□□□□ 0.24
CLDN4-201ENST00000340958 FCRL1Q96LA6 429 aa16.58■□□□□ 0.24
CLDN4-201ENST00000340958 QRFPRQ96P65 431 aa16.58■□□□□ 0.24
CLDN4-201ENST00000340958 CDRT15Q96T59 188 aa16.58■□□□□ 0.24
CLDN4-201ENST00000340958 PRPF18Q99633 342 aaKnown RBP16.58■□□□□ 0.24
CLDN4-201ENST00000340958 ARRDC1-AS1Q9H2J1 176 aa16.58■□□□□ 0.24
CLDN4-201ENST00000340958 AP1M2Q9Y6Q5 423 aa16.58■□□□□ 0.24
CLDN4-201ENST00000340958 PDE5AO76074 875 aa16.57■□□□□ 0.24
CLDN4-201ENST00000340958 SEMA3DO95025 777 aa16.57■□□□□ 0.24
CLDN4-201ENST00000340958 FKBP9O95302 570 aa16.57■□□□□ 0.24
CLDN4-201ENST00000340958 PGRP06401 933 aa16.57■□□□□ 0.24
CLDN4-201ENST00000340958 PROS1P07225 676 aa16.57■□□□□ 0.24
CLDN4-201ENST00000340958 COX7A2P14406 83 aa16.57■□□□□ 0.24
CLDN4-201ENST00000340958 ALDH4A1P30038 563 aa16.57■□□□□ 0.24
CLDN4-201ENST00000340958 DPP6P42658 865 aa16.57■□□□□ 0.24
CLDN4-201ENST00000340958 RAE1P78406 368 aaKnown RBP16.57■□□□□ 0.24
CLDN4-201ENST00000340958 ELF3P78545 371 aaPredicted RBP16.57■□□□□ 0.24
CLDN4-201ENST00000340958 PLIN5Q00G26 463 aa16.57■□□□□ 0.24
CLDN4-201ENST00000340958 ZNF763Q0D2J5 394 aa16.57■□□□□ 0.24
CLDN4-201ENST00000340958 SPEM2Q0P670 501 aa16.57■□□□□ 0.24
CLDN4-201ENST00000340958 MAPKAPK3Q16644 382 aa16.57■□□□□ 0.24
CLDN4-201ENST00000340958 SPANXN4Q5MJ08 99 aa16.57■□□□□ 0.24
CLDN4-201ENST00000340958 C6orf10Q5SRN2 563 aa16.57■□□□□ 0.24
CLDN4-201ENST00000340958 SWT1Q5T5J6 900 aaKnown RBP16.57■□□□□ 0.24
CLDN4-201ENST00000340958 OGFOD3Q6PK18 319 aa16.57■□□□□ 0.24
CLDN4-201ENST00000340958 SLC2A7Q6PXP3 512 aa16.57■□□□□ 0.24
CLDN4-201ENST00000340958 RETREG3Q86VR2 466 aa16.57■□□□□ 0.24
CLDN4-201ENST00000340958 TMEM132CQ8N3T6 1108 aa16.57■□□□□ 0.24
CLDN4-201ENST00000340958 SLC25A45Q8N413 288 aa16.57■□□□□ 0.24
CLDN4-201ENST00000340958 ARL10Q8N8L6 244 aa16.57■□□□□ 0.24
CLDN4-201ENST00000340958 FLVCR1-AS1Q8TAF5 88 aa16.57■□□□□ 0.24
CLDN4-201ENST00000340958 CEP76Q8TAP6 659 aa16.57■□□□□ 0.24
CLDN4-201ENST00000340958 SLC13A3Q8WWT9 602 aa16.57■□□□□ 0.24
CLDN4-201ENST00000340958 OR52E6Q96RD3 313 aa16.57■□□□□ 0.24
CLDN4-201ENST00000340958 UCK1Q9HA47 277 aa16.57■□□□□ 0.24
CLDN4-201ENST00000340958 PARD6AQ9NPB6 346 aa16.57■□□□□ 0.24
CLDN4-201ENST00000340958 FSCN3Q9NQT6 498 aa16.57■□□□□ 0.24
CLDN4-201ENST00000340958 ANKMY1Q9P2S6 941 aa16.57■□□□□ 0.24
CLDN4-201ENST00000340958 LRIT1Q9P2V4 623 aa16.57■□□□□ 0.24
CLDN4-201ENST00000340958 PRPF19Q9UMS4 504 aaKnown RBP16.57■□□□□ 0.24
CLDN4-201ENST00000340958 MAPRE3Q9UPY8 281 aa16.57■□□□□ 0.24
CLDN4-201ENST00000340958 A0A0J9YVX5 310 aa16.56■□□□□ 0.24
CLDN4-201ENST00000340958 ALPPL2P10696 532 aa16.56■□□□□ 0.24
CLDN4-201ENST00000340958 CDH3P22223 829 aa16.56■□□□□ 0.24
CLDN4-201ENST00000340958 ZFP36L2P47974 494 aaKnown RBP16.56■□□□□ 0.24
CLDN4-201ENST00000340958 RXRGP48443 463 aa16.56■□□□□ 0.24
CLDN4-201ENST00000340958 PLA2G16P53816 162 aa16.56■□□□□ 0.24
CLDN4-201ENST00000340958 BNC1Q01954 994 aa16.56■□□□□ 0.24
CLDN4-201ENST00000340958 HLA-BQ31612 363 aa16.56■□□□□ 0.24
CLDN4-201ENST00000340958 TMEM35AQ53FP2 167 aa16.56■□□□□ 0.24
CLDN4-201ENST00000340958 GALNT18Q6P9A2 607 aa16.56■□□□□ 0.24
CLDN4-201ENST00000340958 HACD2Q6Y1H2 254 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms