RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 MYOFQ9NZM1 2061 aa13.87□□□□□ -0.19
CPSF7-201ENST00000340437 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.87□□□□□ -0.19
CPSF7-201ENST00000340437 UPK1BO75841 260 aa13.87□□□□□ -0.19
CPSF7-201ENST00000340437 SLC10A3P09131 477 aa13.87□□□□□ -0.19
CPSF7-201ENST00000340437 ATP1B2P14415 290 aaPredicted RBP13.87□□□□□ -0.19
CPSF7-201ENST00000340437 JUNDP17535 347 aa13.87□□□□□ -0.19
CPSF7-201ENST00000340437 WNT3P56703 355 aa13.87□□□□□ -0.19
CPSF7-201ENST00000340437 TRIM60Q495X7 471 aa13.87□□□□□ -0.19
CPSF7-201ENST00000340437 AGAP7PQ5VUJ5 663 aa13.87□□□□□ -0.19
CPSF7-201ENST00000340437 KLHL17Q6TDP4 642 aa13.87□□□□□ -0.19
CPSF7-201ENST00000340437 TCAIMQ8N3R3 496 aa13.87□□□□□ -0.19
CPSF7-201ENST00000340437 WDR36Q8NI36 951 aaKnown RBP13.87□□□□□ -0.19
CPSF7-201ENST00000340437 VANGL1Q8TAA9 524 aaPredicted RBP13.87□□□□□ -0.19
CPSF7-201ENST00000340437 ATL1Q8WXF7 558 aa13.87□□□□□ -0.19
CPSF7-201ENST00000340437 ASB11Q8WXH4 323 aa13.87□□□□□ -0.19
CPSF7-201ENST00000340437 VPS35Q96QK1 796 aa13.87□□□□□ -0.19
CPSF7-201ENST00000340437 CCM2Q9BSQ5 444 aa13.87□□□□□ -0.19
CPSF7-201ENST00000340437 SUV39H2Q9H5I1 410 aa13.87□□□□□ -0.19
CPSF7-201ENST00000340437 LSM7Q9UK45 103 aaKnown RBP13.87□□□□□ -0.19
CPSF7-201ENST00000340437 NAALAD2Q9Y3Q0 740 aa13.87□□□□□ -0.19
CPSF7-201ENST00000340437 PCDHB11Q9Y5F2 797 aa13.87□□□□□ -0.19
CPSF7-201ENST00000340437 XPAP23025 273 aaPredicted RBP13.87□□□□□ -0.19
CPSF7-201ENST00000340437 ETV3P41162 512 aa13.87□□□□□ -0.19
CPSF7-201ENST00000340437 EIF2DP41214 584 aaKnown RBP13.87□□□□□ -0.19
CPSF7-201ENST00000340437 LEXMQ3ZCV2 418 aa13.87□□□□□ -0.19
CPSF7-201ENST00000340437 CCBE1Q6UXH8 406 aaPredicted RBP13.87□□□□□ -0.19
CPSF7-201ENST00000340437 TPRG1Q6ZUI0 275 aa13.87□□□□□ -0.19
CPSF7-201ENST00000340437 LRRC70Q7Z2Q7 622 aa13.87□□□□□ -0.19
CPSF7-201ENST00000340437 NPAS4Q8IUM7 802 aa13.87□□□□□ -0.19
CPSF7-201ENST00000340437 PARP16Q8N5Y8 322 aa13.87□□□□□ -0.19
CPSF7-201ENST00000340437 ZNF461Q8TAF7 563 aa13.87□□□□□ -0.19
CPSF7-201ENST00000340437 PHF10Q8WUB8 498 aaKnown RBP13.87□□□□□ -0.19
CPSF7-201ENST00000340437 SLC12A9Q9BXP2 914 aa13.87□□□□□ -0.19
CPSF7-201ENST00000340437 CEP44Q9C0F1 390 aa13.87□□□□□ -0.19
CPSF7-201ENST00000340437 CASP8AP2Q9UKL3 1982 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 RPLP0P05388 317 aaKnown RBP13.86□□□□□ -0.19
CPSF7-201ENST00000340437 GRK3P35626 688 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 MAGEA2P43356 314 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 TGM4P49221 684 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 KCNC4Q03721 635 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 RGNQ15493 299 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 SPANXN2Q5MJ10 180 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 ZNF362Q5T0B9 420 aaPredicted RBP13.86□□□□□ -0.19
CPSF7-201ENST00000340437 BCDIN3DQ7Z5W3 292 aaKnown RBP13.86□□□□□ -0.19
CPSF7-201ENST00000340437 C11orf65Q8NCR3 313 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 TESCQ96BS2 214 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 SAMD11Q96NU1 681 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 GPBP1L1Q9HC44 474 aaPredicted RBP13.86□□□□□ -0.19
CPSF7-201ENST00000340437 PRR23AA6NEV1 266 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 CCNKO75909 580 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 MED26O95402 600 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 ALDH9A1P49189 494 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 PFN3P60673 137 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 SNRPD1P62314 119 aaKnown RBP13.86□□□□□ -0.19
CPSF7-201ENST00000340437 KCNJ10P78508 379 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 DMPKQ09013 629 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 CSTF3Q12996 717 aaKnown RBP13.86□□□□□ -0.19
CPSF7-201ENST00000340437 MTA1Q13330 715 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 AGTRAPQ6RW13 159 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 PTCHD4Q6ZW05 846 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 TMEM159Q96B96 161 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 CEP295NLQ96MC4 621 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 FBXO8Q9NRD0 319 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 CTPS2Q9NRF8 586 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 ANKMY1Q9P2S6 941 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 AGAP5A6NIR3 686 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 LOC110117498-PIK3R3F6TDL0 507 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 H3BN98 237 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 INPPL1O15357 1258 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 RFPL2O75678 378 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 DNAJB5O75953 348 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 KCNK2O95069 426 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 IGFBP1P08833 259 aaPredicted RBP13.86□□□□□ -0.19
CPSF7-201ENST00000340437 JUPP14923 745 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 SELPP16109 830 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 DEPDC1Q5TB30 811 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 LYPLAL1Q5VWZ2 237 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 CCSAPQ6IQ19 270 aaPredicted RBP13.86□□□□□ -0.19
CPSF7-201ENST00000340437 ERICH5Q6P6B1 374 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 RNF130Q86XS8 419 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 FAM9CQ8IZT9 166 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 MMP21Q8N119 569 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 ZNF566Q969W8 418 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 CORO1BQ9BR76 489 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 SLC35A5Q9BS91 424 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 SORBS1Q9BX66 1292 aaKnown RBP13.86□□□□□ -0.19
CPSF7-201ENST00000340437 RDH14Q9HBH5 336 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 OR51B4Q9Y5P0 310 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 UNC80Q8N2C7 3258 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 TRPM7Q96QT4 1865 aa13.86□□□□□ -0.19
CPSF7-201ENST00000340437 KIAA0513O60268 411 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 APOL3O95236 402 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 SLC16A8O95907 504 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 KRT8P05787 483 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 GPX2P18283 190 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 ITGA1P56199 1179 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 C2orf80Q0P641 193 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 FAM26DQ5JW98 314 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 TRAF7Q6Q0C0 670 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms