RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 FKBP6O75344 327 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 PGM3O95394 542 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 RGRP47804 291 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 TOP3AQ13472 1001 aaPredicted RBP12.35□□□□□ -0.43
LIN54-201ENST00000340417 OR6Y1Q8NGX8 325 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 PNPLA2Q96AD5 504 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 F2RL3Q96RI0 385 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 RPF2Q9H7B2 306 aaKnown RBP12.35□□□□□ -0.43
LIN54-201ENST00000340417 STARD5Q9NSY2 213 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 FAM189A1O60320 539 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 PRSS56P0CW18 603 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 CCR5P51681 352 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 ABHD18Q0P651 414 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 SF3B4Q15427 424 aaKnown RBP eCLIP12.35□□□□□ -0.433e-6■■■□□ 15.3
LIN54-201ENST00000340417 WSCD2Q2TBF2 565 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 EPYCQ99645 322 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 RPP25Q9BUL9 199 aaKnown RBP12.35□□□□□ -0.43
LIN54-201ENST00000340417 PLA2G2FQ9BZM2 168 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 HHATLQ9HCP6 504 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 SAR1AQ9NR31 198 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 ANKMY1Q9P2S6 941 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 FETUBQ9UGM5 382 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 CASKO14936 926 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 DNAJB1P25685 340 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 MSS51Q4VC12 460 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 RAET1LQ5VY80 246 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 GALNT12Q8IXK2 581 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 PIGXQ8TBF5 258 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 TMEM174Q8WUU8 243 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 C9orf16Q9BUW7 83 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 PACSIN3Q9UKS6 424 aa12.35□□□□□ -0.43
LIN54-201ENST00000340417 ELOVL7A1L3X0 281 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 S100A5P33763 92 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 CD68P34810 354 aaPredicted RBP12.34□□□□□ -0.43
LIN54-201ENST00000340417 RORAP35398 523 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 LRIT3Q3SXY7 679 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 VWA5B1Q5TIE3 1220 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 CCDC116Q8IYX3 515 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 WFDC5Q8TCV5 224 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 FAM117AQ9C073 453 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 EVPLQ92817 2033 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 AGTR2P50052 363 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 RPE65Q16518 533 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 TMEM52BQ4KMG9 183 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 C14orf28Q4W4Y0 310 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 MANEALQ5VSG8 457 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 SPESP1Q6UW49 350 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 SLC22A15Q8IZD6 547 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 IL17RCQ8NAC3 791 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 FAM122AQ96E09 287 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 FAM86C1Q9NVL1 165 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 OXSMQ9NWU1 459 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 NSG1A0A0A6YYJ2 146 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 DSTNP60981 165 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.34□□□□□ -0.43
LIN54-201ENST00000340417 SLC30A8Q8IWU4 369 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 OR2AJ1Q8NGZ0 328 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 FAM81AQ8TBF8 368 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 ACAD8Q9UKU7 415 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 FOXO6A8MYZ6 492 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 CCR10P46092 362 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 NKX3-2P78367 333 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 POU6F2P78424 691 aaPredicted RBP12.34□□□□□ -0.43
LIN54-201ENST00000340417 ZNF763Q0D2J5 394 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 SYCE2Q6PIF2 218 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 TEX19Q8NA77 164 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 B4GALT3O60512 393 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 MAGP20916 626 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 CCT3P49368 545 aaKnown RBP12.34□□□□□ -0.43
LIN54-201ENST00000340417 CTSCP53634 463 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 OR4C11Q6IEV9 310 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 OR52E8Q6IFG1 317 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 SLC30A6Q6NXT4 461 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 ZFP1Q6P2D0 407 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 FGD2Q7Z6J4 655 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 CAND1Q86VP6 1230 aaKnown RBP12.34□□□□□ -0.43
LIN54-201ENST00000340417 SMRP1Q8NCR6 262 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 SEMA6AQ9H2E6 1030 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 ZBTB20Q9HC78 741 aaPredicted RBP12.34□□□□□ -0.43
LIN54-201ENST00000340417 ZNF304Q9HCX3 659 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 TM9SF3Q9HD45 589 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 OR6C2Q9NZP2 312 aa12.34□□□□□ -0.43
LIN54-201ENST00000340417 QSER1Q2KHR3 1735 aa12.33□□□□□ -0.43
LIN54-201ENST00000340417 KIF1CO43896 1103 aaKnown RBP12.33□□□□□ -0.44
LIN54-201ENST00000340417 TPST2O60704 377 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 PENKP01210 267 aaPredicted RBP12.33□□□□□ -0.44
LIN54-201ENST00000340417 LINGO3P0C6S8 592 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 NNATQ16517 81 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 RANBP10Q6VN20 620 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 UBQLNLQ8IYU4 475 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 CNTD1Q8N815 330 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 NEK7Q8TDX7 302 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 NSMCE3Q96MG7 304 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 NECAB3Q96P71 396 aaPredicted RBP12.33□□□□□ -0.44
LIN54-201ENST00000340417 ELF4Q99607 663 aaPredicted RBP12.33□□□□□ -0.44
LIN54-201ENST00000340417 CTRCQ99895 268 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 CLN6Q9NWW5 311 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 KPNA4O00629 521 aaPredicted RBP12.33□□□□□ -0.44
LIN54-201ENST00000340417 CHRNGP07510 517 aa12.33□□□□□ -0.44
LIN54-201ENST00000340417 PVRP15151 417 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms