RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 DGAT2Q96PD7 388 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 CHRAC1Q9NRG0 131 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 PLK2Q9NYY3 685 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 FLRT1Q9NZU1 646 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 LRRC42Q9Y546 428 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 NME7Q9Y5B8 376 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 OVOS2A0A0G2JMS6 1433 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 ALOX15BO15296 676 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 MRPL3P09001 348 aaKnown RBP12.47□□□□□ -0.41
USP47-202ENST00000339865 ZNF181Q2M3W8 571 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 REPS2Q8NFH8 660 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 CYP2W1Q8TAV3 490 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 SALL1Q9NSC2 1324 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 IGFBP1P08833 259 aaPredicted RBP12.47□□□□□ -0.41
USP47-202ENST00000339865 PSMD8P48556 350 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 SDHAF4Q5VUM1 108 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 OTOP3Q7RTS5 596 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 GALNT10Q86SR1 603 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 HSFY1Q96LI6 401 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 TCEAL7Q9BRU2 100 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 PHPT1Q9NRX4 125 aaPredicted RBP12.47□□□□□ -0.41
USP47-202ENST00000339865 CBY3A6NI87 242 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 PAHP00439 452 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 ERCC1P07992 297 aaPredicted RBP12.47□□□□□ -0.41
USP47-202ENST00000339865 CD3GP09693 182 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 SYN1P17600 705 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 EEF1A1P68104 462 aaKnown RBP12.47□□□□□ -0.41
USP47-202ENST00000339865 SERINC3Q13530 473 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 EEF1A1P5Q5VTE0 462 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 LCN9Q8WX39 176 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 LURAP1Q96LR2 239 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 A0A1B0GVM2 712 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 CLIC1O00299 241 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 ARHGEF15O94989 841 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 ADH1CP00326 375 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 MT-ND5P03915 603 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 TAL1P17542 331 aaPredicted RBP12.47□□□□□ -0.41
USP47-202ENST00000339865 TIFAQ96CG3 184 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 GJD4Q96KN9 370 aaPredicted RBP12.47□□□□□ -0.41
USP47-202ENST00000339865 COG8Q96MW5 612 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 PRDM9Q9NQV7 894 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 CLDND1Q9NY35 253 aa12.47□□□□□ -0.41
USP47-202ENST00000339865 ANKRD34BA5PLL1 514 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 A8MUA0 341 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 TLR5O60602 858 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 FMO6PO60774 539 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 ZNF821O75541 412 aaPredicted RBP12.46□□□□□ -0.41
USP47-202ENST00000339865 BCHEP06276 602 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 SULT2A1Q06520 285 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 OR2T5Q6IEZ7 315 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 GLB1L3Q8NCI6 653 aaPredicted RBP12.46□□□□□ -0.41
USP47-202ENST00000339865 OR2T29Q8NH02 315 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 DCAKDQ8WVC6 231 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 SLC13A3Q8WWT9 602 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 IL12RB2Q99665 862 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 CCDC32Q9BV29 185 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 FZD4Q9ULV1 537 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 PCDHGA7Q9Y5G6 932 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 SVILO95425 2214 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 SHROOM2Q13796 1616 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 A0A0G2JN53 185 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 IMPA2O14732 288 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 C6P13671 934 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 CDK2P24941 298 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 SCNN1GP51170 649 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 MC2RQ01718 297 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 FADDQ13158 208 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 HHIPL2Q6UWX4 724 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 LYSMD3Q7Z3D4 306 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 ACER1Q8TDN7 264 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 TMBIM1Q969X1 311 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 DUSP26Q9BV47 211 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 ANKHQ9HCJ1 492 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 MRPS17Q9Y2R5 130 aaKnown RBP12.46□□□□□ -0.41
USP47-202ENST00000339865 TGFB1P01137 390 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 IL3P08700 152 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 MLLT10P55197 1068 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 BACE1P56817 501 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 CLRN1P58418 232 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 SELENOVP59797 346 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 FOXK1P85037 733 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 SLC7A5P1Q8MH63 180 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 CANT1Q8WVQ1 401 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 DEDD2Q8WXF8 326 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 CDK15Q96Q40 435 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 KCNJ16Q9NPI9 418 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 PRORSD1PA6NEY8 169 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 ACKR2O00590 384 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 DFNA5O60443 496 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 NPPAP01160 153 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 SPAM1P38567 509 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 PLGLAQ15195 96 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 USP51Q70EK9 711 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 DPPA2Q7Z7J5 298 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 SLC51AQ86UW1 340 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 ISOC1Q96CN7 298 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 TMEM109Q9BVC6 243 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 NUDT4Q9NZJ9 180 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 GRHPRQ9UBQ7 328 aa12.46□□□□□ -0.41
USP47-202ENST00000339865 UBE2J1Q9Y385 318 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms