RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 ACSL6Q9UKU0 697 aa7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 C4orf51C9J302 202 aa7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 UPK1AO00322 258 aa7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 FOXE1O00358 373 aaPredicted RBP7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 GSTA4O15217 222 aa7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 MBTPS2O43462 519 aa7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 PRAMEF10O60809 474 aa7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 PRKRAO75569 313 aaKnown RBP7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 CREG1O75629 220 aa7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 SMNDC1O75940 238 aaKnown RBP eCLIP7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 KCNK5O95279 499 aa7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 CELA2BP08218 269 aaPredicted RBP7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 ACPPP15309 386 aa7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 FASP25445 335 aa7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 MAPK1P28482 360 aa7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 TPP2P29144 1249 aaPredicted RBP7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 AQP1P29972 269 aa7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 MAPK9P45984 424 aa7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 PLA2G16P53816 162 aa7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 C2orf80Q0P641 193 aa7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 KRT33BQ14525 404 aa7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 RPE65Q16518 533 aa7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 DUOXA1Q1HG43 343 aa7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 OTUD3Q5T2D3 398 aaPredicted RBP7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 RNF220Q5VTB9 566 aa7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 OR52E8Q6IFG1 317 aa7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 LCTLQ6UWM7 567 aa7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 UGT2A3Q6UWM9 527 aa7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 TBC1D21Q8IYX1 336 aa7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 TMEM132CQ8N3T6 1108 aa7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 TMEM145Q8NBT3 493 aa7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 OR5AK3PQ8NH89 298 aa7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 C16orf78Q8WTQ4 265 aa7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 NCLNQ969V3 563 aa7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 FAM120BQ96EK7 910 aaKnown RBP7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 VPS50Q96JG6 964 aa7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 GAS2L1Q99501 681 aaPredicted RBP7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 KLHL25Q9H0H3 589 aa7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 VCX3BQ9H321 246 aa7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 PRO3102Q9H379 93 aa7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 YY1AP1Q9H869 796 aa7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 ZNF624Q9P2J8 865 aaPredicted RBP7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 ACSL5Q9ULC5 683 aa7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 ICKQ9UPZ9 632 aa7.09□□□□□ -1.27
SRFBP1-201ENST00000339397 MDC1Q14676 2089 aaKnown RBP7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 C15orf38-AP3S2A0A0A6YYH1 394 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 CACNB4O00305 520 aaPredicted RBP7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 EI24O14681 340 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 HNRNPRO43390 633 aaKnown RBP7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 DIRAS1O95057 198 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 C6orf47O95873 294 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 SERPINA1P01009 418 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 ANXA6P08133 673 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 IL3P08700 152 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 CSNK1G2P78368 415 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 SRSF11Q05519 484 aaKnown RBP7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 LAPTM4AQ15012 233 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 HIST2H2ACQ16777 129 aaPredicted RBP7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 UAP1L1Q3KQV9 507 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 SPIN4Q56A73 249 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 PAGE2BQ5JRK9 111 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 FOXB2Q5VYV0 432 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 HIST2H2AA3Q6FI13 130 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 GALNT18Q6P9A2 607 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 UBE3DQ7Z6J8 389 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 ARPINQ7Z6K5 226 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 PTOV1Q86YD1 416 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 MICU2Q8IYU8 434 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 NAGSQ8N159 534 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 SLC22A18ASQ8N1D0 253 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 SETD7Q8WTS6 366 aaKnown RBP7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 SNX19Q92543 992 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 EFHD1Q9BUP0 239 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 SLC6A16Q9GZN6 736 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 RMND5AQ9H871 391 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 TPT1P8Q9HAU6 139 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 AASDHPPTQ9NRN7 309 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 RYDENQ9NUL5 291 aaKnown RBP7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 SPASTQ9UBP0 616 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 CYP8B1Q9UNU6 501 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 DNMT3AQ9Y6K1 912 aaPredicted RBP7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 U3KQV3 271 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 SCN2AQ99250 2005 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 RNF103-CHMP3A0A140T963 221 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 A6NHS1 94 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 ANKDD1BA6NHY2 528 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 GLOD5A6NK44 160 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 MYO1DO94832 1006 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 RASGRP1O95267 797 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 FURINP09958 794 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 HSD3B1P14060 373 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 PRKACGP22612 351 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 HSD3B2P26439 372 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 CRYBA2P53672 197 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 MRPS21P82921 87 aaKnown RBP7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 MYBPC1Q00872 1141 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 PRDX1Q06830 199 aaKnown RBP7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 DMPKQ09013 629 aa7.08□□□□□ -1.28
SRFBP1-201ENST00000339397 ZNF763Q0D2J5 394 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms