RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 HTR1AP08908 422 aa12.7□□□□□ -0.38
HLCS-201ENST00000336648 RPS3P23396 243 aaKnown RBP eCLIP12.7□□□□□ -0.38
HLCS-201ENST00000336648 CDH11P55287 796 aa12.7□□□□□ -0.38
HLCS-201ENST00000336648 ARL9Q6T311 187 aa12.7□□□□□ -0.38
HLCS-201ENST00000336648 ZDHHC24Q6UX98 284 aa12.7□□□□□ -0.38
HLCS-201ENST00000336648 CANT1Q8WVQ1 401 aa12.7□□□□□ -0.38
HLCS-201ENST00000336648 TCTEX1D2Q8WW35 142 aa12.7□□□□□ -0.38
HLCS-201ENST00000336648 GPR22Q99680 433 aa12.7□□□□□ -0.38
HLCS-201ENST00000336648 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.7□□□□□ -0.38
HLCS-201ENST00000336648 ACSS2Q9NR19 701 aa12.7□□□□□ -0.38
HLCS-201ENST00000336648 CENPMQ9NSP4 180 aa12.7□□□□□ -0.38
HLCS-201ENST00000336648 A0A1B0GVI7 797 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 AHSA1O95433 338 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 HLA-DQB2P05538 268 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 FOXN2P32314 431 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 SLC6A9P48067 706 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 ZNF404Q494X3 552 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 ZNF773Q6PK81 442 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 C1orf52Q8N6N3 182 aaKnown RBP12.69□□□□□ -0.38
HLCS-201ENST00000336648 OR2AP1Q8NGE2 309 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 FAM110BQ8TC76 370 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 GNPDA2Q8TDQ7 276 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 C12orf42Q96LP6 360 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 KCNC2Q96PR1 638 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 SSX3Q99909 188 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 SLC30A2Q9BRI3 323 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 PCDHB11Q9Y5F2 797 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 PCDHGA2Q9Y5H1 932 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 CENPBD1B2RD01 187 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 C7P10643 843 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 GP1BBP13224 206 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 GSK3BP49841 420 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 CTBP2P56545 445 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 DNAJB13P59910 316 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 NCBP2-AS2Q69YL0 99 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 RPL13AP3Q6NVV1 102 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 EPGNQ6UW88 154 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 HFE2Q6ZVN8 426 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 THOC6Q86W42 341 aaKnown RBP12.69□□□□□ -0.38
HLCS-201ENST00000336648 ELMOD2Q8IZ81 293 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 PHTF2Q8N3S3 785 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 ASB15Q8WXK1 588 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 SUSD3Q96L08 255 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 SLC2A11Q9BYW1 496 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.69□□□□□ -0.38
HLCS-201ENST00000336648 UTS2RQ9UKP6 389 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 Q9Y3F1 56 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 HCN4Q9Y3Q4 1203 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 SH3PXD2BA1X283 911 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 LCHNA4D1U4 455 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 KCNJ11Q14654 390 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 ASTE1Q2TB18 679 aaPredicted RBP12.69□□□□□ -0.38
HLCS-201ENST00000336648 KIAA1614Q5VZ46 1190 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 MTFR2Q6P444 385 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 CLEC20AQ6ZU45 233 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 P4HA3Q7Z4N8 544 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 OR4K17Q8NGC6 315 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 SCGB1C1Q8TD33 95 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 EMID1Q96A84 441 aaPredicted RBP12.69□□□□□ -0.38
HLCS-201ENST00000336648 TRIB3Q96RU7 358 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 ADAM7Q9H2U9 754 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 CARS2Q9HA77 564 aaKnown RBP12.69□□□□□ -0.38
HLCS-201ENST00000336648 SIX2Q9NPC8 291 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 FAM189A1O60320 539 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 ABCB7O75027 752 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 IFNA4P05014 189 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 SMPD1P17405 629 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 VAMP1P23763 118 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 ZNF45Q02386 682 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 BATFQ16520 125 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 FBXO48Q5FWF7 155 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 EBF4Q9BQW3 602 aa12.69□□□□□ -0.38
HLCS-201ENST00000336648 PNO1Q9NRX1 252 aaKnown RBP12.69□□□□□ -0.38
HLCS-201ENST00000336648 BCAS2O75934 225 aaPredicted RBP12.68□□□□□ -0.38
HLCS-201ENST00000336648 NUDT7P0C024 238 aa12.68□□□□□ -0.38
HLCS-201ENST00000336648 SLC18A2Q05940 514 aa12.68□□□□□ -0.38
HLCS-201ENST00000336648 CRHR2Q13324 411 aa12.68□□□□□ -0.38
HLCS-201ENST00000336648 TRAM2Q15035 370 aa12.68□□□□□ -0.38
HLCS-201ENST00000336648 PAFAH1B3Q15102 231 aaKnown RBP12.68□□□□□ -0.38
HLCS-201ENST00000336648 GPR68Q15743 365 aa12.68□□□□□ -0.38
HLCS-201ENST00000336648 POGLUT1Q8NBL1 392 aa12.68□□□□□ -0.38
HLCS-201ENST00000336648 SH3RF2Q8TEC5 729 aa12.68□□□□□ -0.38
HLCS-201ENST00000336648 MAGED1Q9Y5V3 778 aaPredicted RBP12.68□□□□□ -0.38
HLCS-201ENST00000336648 NFAT5O94916 1531 aa12.68□□□□□ -0.38
HLCS-201ENST00000336648 A0A0G2JMP0 313 aa12.68□□□□□ -0.38
HLCS-201ENST00000336648 PRSS51A0A1B0GVH4 220 aa12.68□□□□□ -0.38
HLCS-201ENST00000336648 HRH2P25021 359 aa12.68□□□□□ -0.38
HLCS-201ENST00000336648 HERV-K104P61576 105 aa12.68□□□□□ -0.38
HLCS-201ENST00000336648 E2F1Q01094 437 aa12.68□□□□□ -0.38
HLCS-201ENST00000336648 CREB5Q02930 508 aa12.68□□□□□ -0.38
HLCS-201ENST00000336648 KCNC4Q03721 635 aa12.68□□□□□ -0.38
HLCS-201ENST00000336648 TSTQ16762 297 aaKnown RBP12.68□□□□□ -0.38
HLCS-201ENST00000336648 ZNF829Q3KNS6 432 aaPredicted RBP12.68□□□□□ -0.38
HLCS-201ENST00000336648 SIRPB2Q5JXA9 342 aa12.68□□□□□ -0.38
HLCS-201ENST00000336648 MBLAC2Q68D91 279 aa12.68□□□□□ -0.38
HLCS-201ENST00000336648 NPAS3Q8IXF0 933 aa12.68□□□□□ -0.38
HLCS-201ENST00000336648 ASCC1Q8N9N2 400 aaKnown RBP12.68□□□□□ -0.38
HLCS-201ENST00000336648 OR4M2Q8NGB6 313 aa12.68□□□□□ -0.38
HLCS-201ENST00000336648 CIDECQ96AQ7 238 aaPredicted RBP12.68□□□□□ -0.38
HLCS-201ENST00000336648 RBP7Q96R05 134 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms