RNA–Protein interactions for RNA: ENST00000336023.9

TUBA1B-202, Transcript of tubulin alpha 1b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1B, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-202ENST00000336023 HYAL2Q12891 473 aa13.08□□□□□ -0.32
TUBA1B-202ENST00000336023 TARDBPQ13148 414 aaKnown RBP eCLIP13.08□□□□□ -0.32
TUBA1B-202ENST00000336023 RNF165Q6ZSG1 346 aa13.08□□□□□ -0.32
TUBA1B-202ENST00000336023 RAB11FIP2Q7L804 512 aa13.08□□□□□ -0.32
TUBA1B-202ENST00000336023 ZNF655Q8N720 491 aaPredicted RBP13.08□□□□□ -0.32
TUBA1B-202ENST00000336023 BMPERQ8N8U9 685 aa13.08□□□□□ -0.32
TUBA1B-202ENST00000336023 GBP7Q8N8V2 638 aaPredicted RBP13.08□□□□□ -0.32
TUBA1B-202ENST00000336023 NT5CQ8TCD5 201 aa13.08□□□□□ -0.32
TUBA1B-202ENST00000336023 C19orf60Q96EN9 201 aa13.08□□□□□ -0.32
TUBA1B-202ENST00000336023 CMTM7Q96FZ5 175 aa13.08□□□□□ -0.32
TUBA1B-202ENST00000336023 PPP1R36Q96LQ0 422 aa13.08□□□□□ -0.32
TUBA1B-202ENST00000336023 CCT7Q99832 543 aa13.08□□□□□ -0.32
TUBA1B-202ENST00000336023 MS4A8Q9BY19 250 aa13.08□□□□□ -0.32
TUBA1B-202ENST00000336023 NLNQ9BYT8 704 aa13.08□□□□□ -0.32
TUBA1B-202ENST00000336023 ACPTQ9BZG2 426 aa13.08□□□□□ -0.32
TUBA1B-202ENST00000336023 OR51B5Q9H339 312 aa13.08□□□□□ -0.32
TUBA1B-202ENST00000336023 PSD3Q9NYI0 1048 aa13.08□□□□□ -0.32
TUBA1B-202ENST00000336023 PPT2Q9UMR5 302 aa13.08□□□□□ -0.32
TUBA1B-202ENST00000336023 LOXL2Q9Y4K0 774 aa13.08□□□□□ -0.32
TUBA1B-202ENST00000336023 USH1CQ9Y6N9 552 aa13.08□□□□□ -0.32
TUBA1B-202ENST00000336023 WDFY3Q8IZQ1 3526 aa13.07□□□□□ -0.32
TUBA1B-202ENST00000336023 CCDC187A0A096LP49 1063 aa13.07□□□□□ -0.32
TUBA1B-202ENST00000336023 SERTM1A2A2V5 107 aa13.07□□□□□ -0.32
TUBA1B-202ENST00000336023 FAM149AA5PLN7 773 aa13.07□□□□□ -0.32
TUBA1B-202ENST00000336023 GMNCA6NCL1 334 aa13.07□□□□□ -0.32
TUBA1B-202ENST00000336023 H3BMH7 237 aa13.07□□□□□ -0.32
TUBA1B-202ENST00000336023 TXNDC9O14530 226 aa13.07□□□□□ -0.32
TUBA1B-202ENST00000336023 ZNF195O14628 629 aa13.07□□□□□ -0.32
TUBA1B-202ENST00000336023 ZSCAN9O15535 394 aaPredicted RBP13.07□□□□□ -0.32
TUBA1B-202ENST00000336023 HYAL3O43820 417 aaPredicted RBP13.07□□□□□ -0.32
TUBA1B-202ENST00000336023 TGDSO95455 350 aa13.07□□□□□ -0.32
TUBA1B-202ENST00000336023 ETHE1O95571 254 aa13.07□□□□□ -0.32
TUBA1B-202ENST00000336023 HSD3B1P14060 373 aa13.07□□□□□ -0.32
TUBA1B-202ENST00000336023 HSD3B2P26439 372 aa13.07□□□□□ -0.32
TUBA1B-202ENST00000336023 ITGA1P56199 1179 aa13.07□□□□□ -0.32
TUBA1B-202ENST00000336023 MC2RQ01718 297 aa13.07□□□□□ -0.32
TUBA1B-202ENST00000336023 CSTF3Q12996 717 aaKnown RBP13.07□□□□□ -0.32
TUBA1B-202ENST00000336023 IMPG1Q17R60 797 aa13.07□□□□□ -0.32
TUBA1B-202ENST00000336023 PRTGQ2VWP7 1150 aa13.07□□□□□ -0.32
TUBA1B-202ENST00000336023 MANEAQ5SRI9 462 aa13.07□□□□□ -0.32
TUBA1B-202ENST00000336023 DEPDC1Q5TB30 811 aa13.07□□□□□ -0.32
TUBA1B-202ENST00000336023 CHSY3Q70JA7 882 aa13.07□□□□□ -0.32
TUBA1B-202ENST00000336023 DGLUCYQ7Z3D6 616 aa13.07□□□□□ -0.32
TUBA1B-202ENST00000336023 MAVSQ7Z434 540 aa13.07□□□□□ -0.32
TUBA1B-202ENST00000336023 GPR135Q8IZ08 494 aa13.07□□□□□ -0.32
TUBA1B-202ENST00000336023 KCT2Q8NC54 265 aa13.07□□□□□ -0.32
TUBA1B-202ENST00000336023 THOC1Q96FV9 657 aaKnown RBP13.07□□□□□ -0.32
TUBA1B-202ENST00000336023 C3orf30Q96M34 536 aa13.07□□□□□ -0.32
TUBA1B-202ENST00000336023 F2RL3Q96RI0 385 aa13.07□□□□□ -0.32
TUBA1B-202ENST00000336023 SLC6A16Q9GZN6 736 aa13.07□□□□□ -0.32
TUBA1B-202ENST00000336023 REXO4Q9GZR2 422 aaKnown RBP13.07□□□□□ -0.32
TUBA1B-202ENST00000336023 KLHL31Q9H511 634 aa13.07□□□□□ -0.32
TUBA1B-202ENST00000336023 APMAPQ9HDC9 416 aa13.07□□□□□ -0.32
TUBA1B-202ENST00000336023 PFDN4Q9NQP4 134 aa13.07□□□□□ -0.32
TUBA1B-202ENST00000336023 RARRES3Q9UL19 164 aa13.07□□□□□ -0.32
TUBA1B-202ENST00000336023 SLC12A4Q9UP95 1085 aa13.07□□□□□ -0.32
TUBA1B-202ENST00000336023 RUVBL1Q9Y265 456 aaKnown RBP13.07□□□□□ -0.32
TUBA1B-202ENST00000336023 B4E171 279 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 SLC28A1O00337 649 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 POLR1CO15160 346 aaPredicted RBP13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 ITIH1P19827 911 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 HNRNPH1P31943 449 aaKnown RBP13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 TSPAN7P41732 249 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 STXBP1P61764 594 aaKnown RBP13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 EIF3IQ13347 325 aaKnown RBP13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 CUL3Q13618 768 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 COL9A2Q14055 689 aaPredicted RBP13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 IL11RAQ14626 422 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 GRM7Q14831 915 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 ADPRMQ3LIE5 342 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 XKR7Q5GH72 579 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 VWA5B1Q5TIE3 1220 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 KHDRBS2Q5VWX1 349 aaKnown RBP13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 Q6ZSR9 355 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 MARCH9Q86YJ5 346 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 GALNT15Q8N3T1 639 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 OR2T11Q8NH01 316 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 OR8K5Q8NH50 307 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 SERPINI1Q99574 410 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 TRIM55Q9BYV6 548 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 AICDAQ9GZX7 198 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 MEAF6Q9HAF1 191 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 NPHS2Q9NP85 383 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 FBXO8Q9NRD0 319 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 ENAMQ9NRM1 1142 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 NMRK1Q9NWW6 199 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 VPS29Q9UBQ0 182 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 CCL27Q9Y4X3 112 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 COL27A1Q8IZC6 1860 aaPredicted RBP13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 SPTBP11277 2137 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 ATP6AP2A0A1C7CYW4 349 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 A0A1W2PNU3 283 aaPredicted RBP13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 PMS2P1A4D2B8 440 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 FITM1A5D6W6 292 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 TRPC5OSA6NMA1 111 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 SAP18O00422 153 aaKnown RBP13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 PLD2O14939 933 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 RGS14O43566 566 aa13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 SHOX2O60902 331 aaPredicted RBP13.06□□□□□ -0.32
TUBA1B-202ENST00000336023 ATP6AP2O75787 350 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms