RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 NUDT7P0C024 238 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 COX7A2P14406 83 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 TACR2P21452 398 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 MAPKAPK2P49137 400 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 CDH12P55289 794 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 BAK1Q16611 211 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 ERICH5Q6P6B1 374 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 CBLL1Q75N03 491 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 CLECL1Q8IZS7 167 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 B3GNT7Q8NFL0 401 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 SCLYQ96I15 445 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 RLIMQ9NVW2 624 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 ARL15Q9NXU5 204 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 PCDHB9Q9Y5E1 797 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 KLK4Q9Y5K2 254 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 ARHGEF9O43307 516 aa13.25□□□□□ -0.29
SYNE3-201ENST00000334258 SH3BGRLO75368 114 aa13.25□□□□□ -0.29
SYNE3-201ENST00000334258 IL12RB1P42701 662 aa13.25□□□□□ -0.29
SYNE3-201ENST00000334258 OR1E2P47887 323 aa13.25□□□□□ -0.29
SYNE3-201ENST00000334258 CCL23P55773 120 aa13.25□□□□□ -0.29
SYNE3-201ENST00000334258 P2RX3P56373 397 aa13.25□□□□□ -0.29
SYNE3-201ENST00000334258 SPIBQ01892 262 aa13.25□□□□□ -0.29
SYNE3-201ENST00000334258 DDX39BQ13838 428 aaKnown RBP13.25□□□□□ -0.29
SYNE3-201ENST00000334258 MBTPS1Q14703 1052 aa13.25□□□□□ -0.29
SYNE3-201ENST00000334258 DUOXA1Q1HG43 343 aa13.25□□□□□ -0.29
SYNE3-201ENST00000334258 ERAP2Q6P179 960 aa13.25□□□□□ -0.29
SYNE3-201ENST00000334258 SYCE2Q6PIF2 218 aa13.25□□□□□ -0.29
SYNE3-201ENST00000334258 LYPD8Q6UX82 237 aa13.25□□□□□ -0.29
SYNE3-201ENST00000334258 SERPINA9Q86WD7 417 aa13.25□□□□□ -0.29
SYNE3-201ENST00000334258 KRT73Q86Y46 540 aa13.25□□□□□ -0.29
SYNE3-201ENST00000334258 ATAD1Q8NBU5 361 aa13.25□□□□□ -0.29
SYNE3-201ENST00000334258 GALNT6Q8NCL4 622 aa13.25□□□□□ -0.29
SYNE3-201ENST00000334258 GTPBP3Q969Y2 492 aaKnown RBP13.25□□□□□ -0.29
SYNE3-201ENST00000334258 APIPQ96GX9 242 aa13.25□□□□□ -0.29
SYNE3-201ENST00000334258 CRELD1Q96HD1 420 aa13.25□□□□□ -0.29
SYNE3-201ENST00000334258 SLA2Q9H6Q3 261 aa13.25□□□□□ -0.29
SYNE3-201ENST00000334258 ABCB8Q9NUT2 735 aa13.25□□□□□ -0.29
SYNE3-201ENST00000334258 OARD1Q9Y530 152 aa13.25□□□□□ -0.29
SYNE3-201ENST00000334258 PTPN6P29350 595 aa13.25□□□□□ -0.29
SYNE3-201ENST00000334258 OR1G1P47890 313 aa13.25□□□□□ -0.29
SYNE3-201ENST00000334258 RFX2P48378 723 aa13.25□□□□□ -0.29
SYNE3-201ENST00000334258 KCNQ1P51787 676 aa13.25□□□□□ -0.29
SYNE3-201ENST00000334258 RPS24P62847 133 aaKnown RBP13.25□□□□□ -0.29
SYNE3-201ENST00000334258 CACNG1Q06432 222 aa13.25□□□□□ -0.29
SYNE3-201ENST00000334258 SCN1BQ07699 218 aa13.25□□□□□ -0.29
SYNE3-201ENST00000334258 PPIGQ13427 754 aaKnown RBP eCLIP13.25□□□□□ -0.29
SYNE3-201ENST00000334258 IRF3Q14653 427 aa13.25□□□□□ -0.29
SYNE3-201ENST00000334258 FAM131AQ6UXB0 335 aa13.25□□□□□ -0.29
SYNE3-201ENST00000334258 LINGO4Q6UY18 593 aa13.25□□□□□ -0.29
SYNE3-201ENST00000334258 FAM9CQ8IZT9 166 aa13.25□□□□□ -0.29
SYNE3-201ENST00000334258 CAMKK1Q8N5S9 505 aa13.25□□□□□ -0.29
SYNE3-201ENST00000334258 PLCXD1Q9NUJ7 323 aa13.25□□□□□ -0.29
SYNE3-201ENST00000334258 TMEM184CQ9NVA4 438 aa13.25□□□□□ -0.29
SYNE3-201ENST00000334258 TRPS1Q9UHF7 1281 aa13.25□□□□□ -0.29
SYNE3-201ENST00000334258 PCDHB1Q9Y5F3 818 aa13.25□□□□□ -0.29
SYNE3-201ENST00000334258 DRGXA6NNA5 263 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 IL7P13232 177 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 HOXD9P28356 352 aaPredicted RBP13.24□□□□□ -0.29
SYNE3-201ENST00000334258 MAPK1P28482 360 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 VEGFBP49765 207 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 DSC3Q14574 896 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 RTN4RL1Q86UN2 441 aaPredicted RBP13.24□□□□□ -0.29
SYNE3-201ENST00000334258 LAX1Q8IWV1 398 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 SETD6Q8TBK2 473 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 LKAAEAR1Q8TD35 194 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 ZNF296Q8WUU4 475 aaPredicted RBP13.24□□□□□ -0.29
SYNE3-201ENST00000334258 ASB8Q9H765 288 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 STARD7Q9NQZ5 370 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 SRRDQ9UH36 339 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 TEKT2Q9UIF3 430 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 PCDHGB2Q9Y5G2 931 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 SNTNA6NMZ2 147 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 UGT2B17O75795 530 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 FHP07954 510 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 TGM4P49221 684 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 TAF10Q12962 218 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 CYP27C1Q4G0S4 372 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 GPAT3Q53EU6 434 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 PDZK1Q5T2W1 519 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 DEFB128Q7Z7B8 93 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 LGI4Q8N135 537 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 MAP6Q96JE9 813 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 NECTIN4Q96NY8 510 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 EPYCQ99645 322 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 GABARAPL3Q9BY60 117 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 PDFQ9HBH1 243 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 STMN3Q9NZ72 180 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 MYO9BQ13459 2157 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 GPX5O75715 221 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 PRAMEF1O95521 474 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 RPS19P39019 145 aaKnown RBP13.24□□□□□ -0.29
SYNE3-201ENST00000334258 GPLD1P80108 840 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 ZNF367Q7RTV3 350 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 RNF180Q86T96 592 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 PTOV1Q86YD1 416 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 RNF175Q8N4F7 328 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 TTC9BQ8N6N2 239 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 TOR1AIP2Q8NFQ8 470 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 SLC7A6Q92536 515 aa13.24□□□□□ -0.29
SYNE3-201ENST00000334258 NIPSNAP1Q9BPW8 284 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms