RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 MRGPRX1Q96LB2 322 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 APOOQ9BUR5 198 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 RSPH9Q9H1X1 276 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-201ENST00000334136 SRMSQ9H3Y6 488 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 LRTM1Q9HBL6 345 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 KLHL1Q9NR64 748 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 MKS1Q9NXB0 559 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 AHSPQ9NZD4 102 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 APOBEC3BQ9UH17 382 aaKnown RBP11.4□□□□□ -0.58
HDAC6-201ENST00000334136 PTBP2Q9UKA9 531 aaKnown RBP11.4□□□□□ -0.58
HDAC6-201ENST00000334136 KRT87PA6NCN2 255 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 OTOL1A6NHN0 477 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-201ENST00000334136 INAVAQ3KP66 663 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 PRAMEF14Q5SWL7 426 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 FOXB2Q5VYV0 432 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 STEAP4Q687X5 459 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 PACRGLQ8N7B6 248 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 SETD7Q8WTS6 366 aaKnown RBP11.4□□□□□ -0.58
HDAC6-201ENST00000334136 NSMCE3Q96MG7 304 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 KCNS3Q9BQ31 491 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 PRRG3Q9BZD7 231 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 ZNF624Q9P2J8 865 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-201ENST00000334136 FFAR2O15552 330 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 ACSL1P33121 698 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 MMP12P39900 470 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 CDKN1CP49918 316 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-201ENST00000334136 PMS2P3Q13401 168 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 SUZ12Q15022 739 aaKnown RBP11.4□□□□□ -0.58
HDAC6-201ENST00000334136 KIAA0895LQ68EN5 471 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 EIF3MQ7L2H7 374 aaKnown RBP11.4□□□□□ -0.58
HDAC6-201ENST00000334136 EPHX4Q8IUS5 362 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 GAB3Q8WWW8 586 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 NUSAP1Q9BXS6 441 aaKnown RBP11.4□□□□□ -0.58
HDAC6-201ENST00000334136 DNAJB9Q9UBS3 223 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 FZD4Q9ULV1 537 aa11.4□□□□□ -0.58
HDAC6-201ENST00000334136 LRRC14BA6NHZ5 514 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 SUV39H1O43463 412 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 UGT2B11O75310 529 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 CPOXP36551 454 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 HNRNPKP61978 463 aaKnown RBP eCLIP11.39□□□□□ -0.59
HDAC6-201ENST00000334136 EIF4EBP2Q13542 120 aaPredicted RBP11.39□□□□□ -0.59
HDAC6-201ENST00000334136 GRB7Q14451 532 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 CYS1Q717R9 158 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 EEF1AKMT1Q8WVE0 214 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 SLC13A3Q8WWT9 602 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 STON2Q8WXE9 905 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 ITCHQ96J02 903 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 OLFM1Q99784 485 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 DNAJC11Q9NVH1 559 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 ACSL5Q9ULC5 683 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 SNX6Q9UNH7 406 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 PLOD3O60568 738 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 ZNF140P52738 457 aaPredicted RBP11.39□□□□□ -0.59
HDAC6-201ENST00000334136 ARSFP54793 590 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 CASP9P55211 416 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 RAB15P59190 212 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 IL18R1Q13478 541 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 PNCKQ6P2M8 343 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 SLC15A3Q8IY34 581 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 PIANPQ8IYJ0 282 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 NSUN5Q96P11 429 aaKnown RBP11.39□□□□□ -0.59
HDAC6-201ENST00000334136 COPS4Q9BT78 406 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 BOCQ9BWV1 1114 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 TRIM45Q9H8W5 580 aaPredicted RBP11.39□□□□□ -0.59
HDAC6-201ENST00000334136 TRPV5Q9NQA5 729 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 NUDT4Q9NZJ9 180 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 EMCNQ9ULC0 261 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 TESMINQ9Y4I5 508 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 URB1O60287 2271 aaKnown RBP11.39□□□□□ -0.59
HDAC6-201ENST00000334136 CHURC1-FNTBB4DL54 471 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 B4GAT1O43505 415 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 FNTBP49356 437 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 NUDT6P53370 316 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 QPRTQ15274 297 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 AMZ1Q400G9 498 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 KIAA1211LQ6NV74 962 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 TMEM53Q6P2H8 277 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 PLET1Q6UQ28 207 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 FAM131AQ6UXB0 335 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 CYP4Z1Q86W10 505 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 WDR36Q8NI36 951 aaKnown RBP11.39□□□□□ -0.59
HDAC6-201ENST00000334136 MUC13Q9H3R2 512 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 CCDC177Q9NQR7 707 aaPredicted RBP11.39□□□□□ -0.59
HDAC6-201ENST00000334136 SAMD4AQ9UPU9 718 aaKnown RBP11.39□□□□□ -0.59
HDAC6-201ENST00000334136 DHRS7Q9Y394 339 aa11.39□□□□□ -0.59
HDAC6-201ENST00000334136 PSIP1O75475 530 aaKnown RBP11.38□□□□□ -0.59
HDAC6-201ENST00000334136 PDE9AO76083 593 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 SNX4O95219 450 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 JUNP05412 331 aaKnown RBP11.38□□□□□ -0.59
HDAC6-201ENST00000334136 MMP2P08253 660 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 C1SP09871 688 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 CD38P28907 300 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 PCSK6P29122 969 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 KIR3DL1P43629 444 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 IST1P53990 364 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 IRF4Q15306 451 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 ANGPT1Q15389 498 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 NDUFA5Q16718 116 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 TMEM236Q5W0B7 351 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 ZNF773Q6PK81 442 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms