RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 USH1CQ9Y6N9 552 aa15.76■□□□□ 0.11
SHOX-201ENST00000334060 TRBC2A0A5B9 178 aa15.75■□□□□ 0.11
SHOX-201ENST00000334060 GMNCA6NCL1 334 aa15.75■□□□□ 0.11
SHOX-201ENST00000334060 TMEM150CB9EJG8 249 aa15.75■□□□□ 0.11
SHOX-201ENST00000334060 AQP5P55064 265 aa15.75■□□□□ 0.11
SHOX-201ENST00000334060 CRLF3Q8IUI8 442 aa15.75■□□□□ 0.11
SHOX-201ENST00000334060 D2HGDHQ8N465 521 aa15.75■□□□□ 0.11
SHOX-201ENST00000334060 MFSD9Q8NBP5 474 aa15.75■□□□□ 0.11
SHOX-201ENST00000334060 ZUFSPQ96AP4 578 aa15.75■□□□□ 0.11
SHOX-201ENST00000334060 APIPQ96GX9 242 aa15.75■□□□□ 0.11
SHOX-201ENST00000334060 EPB41L1Q9H4G0 881 aa15.75■□□□□ 0.11
SHOX-201ENST00000334060 ELOVL6Q9H5J4 265 aa15.75■□□□□ 0.11
SHOX-201ENST00000334060 EML4Q9HC35 981 aaKnown RBP15.75■□□□□ 0.11
SHOX-201ENST00000334060 LHX9Q9NQ69 397 aa15.75■□□□□ 0.11
SHOX-201ENST00000334060 RUVBL1Q9Y265 456 aaKnown RBP15.75■□□□□ 0.11
SHOX-201ENST00000334060 SDHDO14521 159 aa15.75■□□□□ 0.11
SHOX-201ENST00000334060 CSO75390 466 aaKnown RBP15.75■□□□□ 0.11
SHOX-201ENST00000334060 KLHL18O94889 574 aa15.75■□□□□ 0.11
SHOX-201ENST00000334060 CCNDBP1O95273 360 aa15.75■□□□□ 0.11
SHOX-201ENST00000334060 MT-CO3P00414 261 aa15.75■□□□□ 0.11
SHOX-201ENST00000334060 CSRP1P21291 193 aaKnown RBP15.75■□□□□ 0.11
SHOX-201ENST00000334060 SERPINB5P36952 375 aa15.75■□□□□ 0.11
SHOX-201ENST00000334060 RAB8AP61006 207 aa15.75■□□□□ 0.11
SHOX-201ENST00000334060 HSD11B2P80365 405 aa15.75■□□□□ 0.11
SHOX-201ENST00000334060 ISXQ2M1V0 245 aa15.75■□□□□ 0.11
SHOX-201ENST00000334060 RBM44Q6ZP01 1051 aaKnown RBP15.75■□□□□ 0.11
SHOX-201ENST00000334060 WDR48Q8TAF3 677 aa15.75■□□□□ 0.11
SHOX-201ENST00000334060 G3BP2Q9UN86 482 aaKnown RBP15.75■□□□□ 0.11
SHOX-201ENST00000334060 ZNF860A6NHJ4 632 aa15.74■□□□□ 0.11
SHOX-201ENST00000334060 EFCAB7A8K855 629 aa15.74■□□□□ 0.11
SHOX-201ENST00000334060 HGSO14964 777 aaPredicted RBP15.74■□□□□ 0.11
SHOX-201ENST00000334060 UGDHO60701 494 aa15.74■□□□□ 0.11
SHOX-201ENST00000334060 ULK1O75385 1050 aa15.74■□□□□ 0.11
SHOX-201ENST00000334060 SPINK2P20155 84 aa15.74■□□□□ 0.11
SHOX-201ENST00000334060 HK2P52789 917 aa15.74■□□□□ 0.11
SHOX-201ENST00000334060 INHBCP55103 352 aa15.74■□□□□ 0.11
SHOX-201ENST00000334060 FOXM1Q08050 763 aa15.74■□□□□ 0.11
SHOX-201ENST00000334060 XKR7Q5GH72 579 aa15.74■□□□□ 0.11
SHOX-201ENST00000334060 WASHC2DQ5SRD0 308 aa15.74■□□□□ 0.11
SHOX-201ENST00000334060 APLFQ8IW19 511 aaPredicted RBP15.74■□□□□ 0.11
SHOX-201ENST00000334060 CHCHD4Q8N4Q1 142 aa15.74■□□□□ 0.11
SHOX-201ENST00000334060 ARHGEF39Q8N4T4 335 aa15.74■□□□□ 0.11
SHOX-201ENST00000334060 BMPERQ8N8U9 685 aa15.74■□□□□ 0.11
SHOX-201ENST00000334060 SLC38A9Q8NBW4 561 aa15.74■□□□□ 0.11
SHOX-201ENST00000334060 SLC13A3Q8WWT9 602 aa15.74■□□□□ 0.11
SHOX-201ENST00000334060 ZNF501Q96CX3 271 aaPredicted RBP15.74■□□□□ 0.11
SHOX-201ENST00000334060 C19orf60Q96EN9 201 aa15.74■□□□□ 0.11
SHOX-201ENST00000334060 TCTN2Q96GX1 697 aa15.74■□□□□ 0.11
SHOX-201ENST00000334060 OR6C1Q96RD1 312 aa15.74■□□□□ 0.11
SHOX-201ENST00000334060 ELAC2Q9BQ52 826 aaKnown RBP15.74■□□□□ 0.11
SHOX-201ENST00000334060 C1orf50Q9BV19 199 aa15.74■□□□□ 0.11
SHOX-201ENST00000334060 ZNF717Q9BY31 904 aaPredicted RBP15.74■□□□□ 0.11
SHOX-201ENST00000334060 PRM3Q9NNZ6 103 aa15.74■□□□□ 0.11
SHOX-201ENST00000334060 PDE7BQ9NP56 450 aa15.74■□□□□ 0.11
SHOX-201ENST00000334060 ZFP69BQ9UJL9 534 aa15.74■□□□□ 0.11
SHOX-201ENST00000334060 SLC12A4Q9UP95 1085 aa15.74■□□□□ 0.11
SHOX-201ENST00000334060 TMEM184BQ9Y519 407 aaPredicted RBP15.74■□□□□ 0.11
SHOX-201ENST00000334060 FER1L5A0AVI2 2057 aa15.74■□□□□ 0.11
SHOX-201ENST00000334060 A0A0G2JND7 137 aa15.73■□□□□ 0.11
SHOX-201ENST00000334060 TEX51A0A1B0GUA7 166 aa15.73■□□□□ 0.11
SHOX-201ENST00000334060 MGRN1O60291 552 aa15.73■□□□□ 0.11
SHOX-201ENST00000334060 FOXD2O60548 495 aaPredicted RBP15.73■□□□□ 0.11
SHOX-201ENST00000334060 PEX11AO75192 247 aa15.73■□□□□ 0.11
SHOX-201ENST00000334060 ENO1P06733 434 aaKnown RBP15.73■□□□□ 0.11
SHOX-201ENST00000334060 ZNF28P17035 718 aa15.73■□□□□ 0.11
SHOX-201ENST00000334060 PLA2G16P53816 162 aa15.73■□□□□ 0.11
SHOX-201ENST00000334060 OLR1P78380 273 aa15.73■□□□□ 0.11
SHOX-201ENST00000334060 GALNTL6Q49A17 601 aa15.73■□□□□ 0.11
SHOX-201ENST00000334060 TLDC1Q6P9B6 456 aa15.73■□□□□ 0.11
SHOX-201ENST00000334060 ZNF793Q6ZN11 406 aa15.73■□□□□ 0.11
SHOX-201ENST00000334060 PDSS2Q86YH6 399 aa15.73■□□□□ 0.11
SHOX-201ENST00000334060 ZNF655Q8N720 491 aaPredicted RBP15.73■□□□□ 0.11
SHOX-201ENST00000334060 UCN3Q969E3 161 aa15.73■□□□□ 0.11
SHOX-201ENST00000334060 TM4SF19Q96DZ7 209 aa15.73■□□□□ 0.11
SHOX-201ENST00000334060 C10orf90Q96M02 699 aa15.73■□□□□ 0.11
SHOX-201ENST00000334060 CD180Q99467 661 aa15.73■□□□□ 0.11
SHOX-201ENST00000334060 SARGQ9BW04 601 aa15.73■□□□□ 0.11
SHOX-201ENST00000334060 EBPLQ9BY08 206 aa15.73■□□□□ 0.11
SHOX-201ENST00000334060 MS4A8Q9BY19 250 aa15.73■□□□□ 0.11
SHOX-201ENST00000334060 SLC29A3Q9BZD2 475 aa15.73■□□□□ 0.11
SHOX-201ENST00000334060 RHBGQ9H310 441 aa15.73■□□□□ 0.11
SHOX-201ENST00000334060 AKIRIN1Q9H9L7 192 aaPredicted RBP15.73■□□□□ 0.11
SHOX-201ENST00000334060 FGF21Q9NSA1 209 aa15.73■□□□□ 0.11
SHOX-201ENST00000334060 DHCR7Q9UBM7 475 aaKnown RBP15.73■□□□□ 0.11
SHOX-201ENST00000334060 AP1M2Q9Y6Q5 423 aa15.73■□□□□ 0.11
SHOX-201ENST00000334060 CFAP73A6NFT4 308 aa15.73■□□□□ 0.11
SHOX-201ENST00000334060 DIAPH2O60879 1101 aa15.73■□□□□ 0.11
SHOX-201ENST00000334060 IL1RNP18510 177 aa15.73■□□□□ 0.11
SHOX-201ENST00000334060 IDH3AP50213 366 aa15.73■□□□□ 0.11
SHOX-201ENST00000334060 CLNS1AP54105 237 aaKnown RBP15.73■□□□□ 0.11
SHOX-201ENST00000334060 IFT88Q13099 833 aa15.73■□□□□ 0.11
SHOX-201ENST00000334060 TARDBPQ13148 414 aaKnown RBP eCLIP15.73■□□□□ 0.11
SHOX-201ENST00000334060 TUBB3Q13509 450 aa15.73■□□□□ 0.11
SHOX-201ENST00000334060 RFTN2Q52LD8 501 aaPredicted RBP15.73■□□□□ 0.11
SHOX-201ENST00000334060 TOR1AIP1Q5JTV8 583 aa15.73■□□□□ 0.11
SHOX-201ENST00000334060 ASPGQ86U10 573 aa15.73■□□□□ 0.11
SHOX-201ENST00000334060 CACNA2D3Q8IZS8 1091 aa15.73■□□□□ 0.11
SHOX-201ENST00000334060 MMP21Q8N119 569 aa15.73■□□□□ 0.11
SHOX-201ENST00000334060 KRT78Q8N1N4 520 aa15.73■□□□□ 0.11
SHOX-201ENST00000334060 CSNK1A1LQ8N752 337 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms