RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 H0YGN5 161 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 TLX3O43711 291 aaPredicted RBP10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 C22orf31O95567 290 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 NDST3O95803 873 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 KLRC2P26717 231 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 ELOAQ14241 798 aaKnown RBP10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 CHRNA6Q15825 494 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 DCUN1D3Q8IWE4 304 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 LPAR1Q92633 364 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 ZNF578Q96N58 590 aaPredicted RBP10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 SAMD11Q96NU1 681 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 OR14A2Q96R54 314 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 VRTNQ9H8Y1 702 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 SCPEP1Q9HB40 452 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 ACAD8Q9UKU7 415 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 NFS1Q9Y697 457 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 NPHP4O75161 1426 aaPredicted RBP10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 KERAO60938 352 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 BANF1O75531 89 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 PIAS1O75925 651 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 ALAS2P22557 587 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 PTGIRP43119 386 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 MAGEB1P43366 347 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 TARDBPQ13148 414 aaKnown RBP eCLIP10.05□□□□□ -0.84e-6■■■■□ 19.5
SPTBN1-201ENST00000333896 SETD7Q8WTS6 366 aaKnown RBP10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 CASTOR1Q8WTX7 329 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 TTYH3Q9C0H2 523 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 ABCG4Q9H172 646 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 A0A0U1RQJ8 604 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 FABP6P51161 128 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 PNLIPRP1P54315 467 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 CDH12P55289 794 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 RAP2BP61225 183 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 EIF2B1Q14232 305 aaKnown RBP10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 RNF180Q86T96 592 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 JAGN1Q8N5M9 183 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 OSTF1Q92882 214 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 SEZ6LQ9BYH1 1024 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 BRF2Q9HAW0 419 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 WASF3Q9UPY6 502 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 EXOSC1Q9Y3B2 195 aaKnown RBP10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 PCDHGA1Q9Y5H4 931 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 OR6C74A6NCV1 312 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 ADAP00813 363 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 HCKP08631 526 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 SSR2P43308 183 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 CLCN7P51798 805 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 NFATC4Q14934 902 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 C1QTNF12Q5T7M4 302 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 IQCHQ86VS3 1027 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 OVCA2Q8WZ82 227 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 MTFR1LQ9H019 292 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 MIR1-1HGQ9H1L0 117 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 GBA3Q9H227 469 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 RPS10P5Q9NQ39 176 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 SDHAF2Q9NX18 166 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 K7EPK0 472 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 CALCRP30988 508 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 LEPRP48357 1165 aaKnown RBP10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 IDH3GP51553 393 aaPredicted RBP10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 TAS2R39P59534 338 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 IFI44LQ53G44 452 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 LBHQ53QV2 105 aaPredicted RBP10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 C6orf141Q5SZD1 244 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 SLC9B2Q86UD5 537 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 FAM71E2Q8N5Q1 922 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 C2orf73Q8N5S3 287 aaPredicted RBP10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 OR4Q3Q8NH05 313 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 SMAP2Q8WU79 429 aaPredicted RBP10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 CDC6Q99741 560 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 NAALAD2Q9Y3Q0 740 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 A0A1W2PP18 115 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 FAM230AA0A1W2PPH8 454 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 DPP6P42658 865 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 FXYD6P3P58550 94 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 SNRPD1P62314 119 aaKnown RBP10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 RANP62826 216 aaKnown RBP10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 DUSP6Q16828 381 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 GPR157Q5UAW9 335 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 MAP1SQ66K74 1059 aaPredicted RBP10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 NPNTQ6UXI9 565 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 ZNF852Q6ZMS4 543 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 SV2AQ7L0J3 742 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 NATD1Q8N6N6 113 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 LIN7BQ9HAP6 207 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 NOX1Q9Y5S8 564 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 A0A1W2PRQ8 180 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 AQP9O43315 295 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 ACTBP60709 375 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 ACTG1P63261 375 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 ZNF169Q14929 603 aaPredicted RBP10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 COL19A1Q14993 1142 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 COQ5Q5HYK3 327 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 TIGD3Q6B0B8 471 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 GPR153Q6NV75 609 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 ARL6IP6Q8N6S5 226 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 SLC43A3Q8NBI5 491 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 RNF157Q96PX1 679 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 SYT4Q9H2B2 425 aa10.04□□□□□ -0.8
SPTBN1-201ENST00000333896 OXSMQ9NWU1 459 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms