RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 TRNAU1APQ9NX07 287 aaKnown RBP15.28■□□□□ 0.04
PDGFB-201ENST00000331163 DLGAP4Q9Y2H0 992 aa15.28■□□□□ 0.04
PDGFB-201ENST00000331163 DENRO43583 198 aaKnown RBP15.27■□□□□ 0.04
PDGFB-201ENST00000331163 ZNF682O95780 498 aa15.27■□□□□ 0.04
PDGFB-201ENST00000331163 OCM2P0CE71 109 aa15.27■□□□□ 0.04
PDGFB-201ENST00000331163 OCMP0CE72 109 aaPredicted RBP15.27■□□□□ 0.04
PDGFB-201ENST00000331163 NR4A1P22736 598 aa15.27■□□□□ 0.04
PDGFB-201ENST00000331163 FOXM1Q08050 763 aa15.27■□□□□ 0.04
PDGFB-201ENST00000331163 HSPB3Q12988 150 aa15.27■□□□□ 0.04
PDGFB-201ENST00000331163 KLHDC8BQ8IXV7 354 aa15.27■□□□□ 0.04
PDGFB-201ENST00000331163 DNASE1L2Q92874 299 aa15.27■□□□□ 0.04
PDGFB-201ENST00000331163 SLC29A1Q99808 456 aa15.27■□□□□ 0.04
PDGFB-201ENST00000331163 TBC1D23Q9NUY8 699 aa15.27■□□□□ 0.04
PDGFB-201ENST00000331163 BCAP29Q9UHQ4 241 aa15.27■□□□□ 0.04
PDGFB-201ENST00000331163 PRAMEF26H0Y7S4 382 aa15.27■□□□□ 0.04
PDGFB-201ENST00000331163 HOXB3P14651 431 aaPredicted RBP15.27■□□□□ 0.04
PDGFB-201ENST00000331163 RXRGP48443 463 aa15.27■□□□□ 0.04
PDGFB-201ENST00000331163 PHEXP78562 749 aa15.27■□□□□ 0.04
PDGFB-201ENST00000331163 TP53BP2Q13625 1128 aa15.27■□□□□ 0.04
PDGFB-201ENST00000331163 ALG11Q2TAA5 492 aa15.27■□□□□ 0.04
PDGFB-201ENST00000331163 GTDC1Q4AE62 458 aa15.27■□□□□ 0.04
PDGFB-201ENST00000331163 CATSPER1Q8NEC5 780 aa15.27■□□□□ 0.04
PDGFB-201ENST00000331163 OR7G3Q8NG95 312 aa15.27■□□□□ 0.04
PDGFB-201ENST00000331163 ZNF382Q96SR6 550 aa15.27■□□□□ 0.04
PDGFB-201ENST00000331163 ZDHHC5Q9C0B5 715 aa15.27■□□□□ 0.04
PDGFB-201ENST00000331163 AP4S1Q9Y587 144 aa15.27■□□□□ 0.04
PDGFB-201ENST00000331163 PCDHGA11Q9Y5H2 935 aa15.27■□□□□ 0.04
PDGFB-201ENST00000331163 GMEB1Q9Y692 573 aa15.27■□□□□ 0.04
PDGFB-201ENST00000331163 WASHC1A8K0Z3 465 aa15.27■□□□□ 0.03
PDGFB-201ENST00000331163 IDO1P14902 403 aa15.27■□□□□ 0.03
PDGFB-201ENST00000331163 CHI3L1P36222 383 aaPredicted RBP15.27■□□□□ 0.03
PDGFB-201ENST00000331163 YAP1P46937 504 aaKnown RBP15.27■□□□□ 0.03
PDGFB-201ENST00000331163 HNMTP50135 292 aa15.27■□□□□ 0.03
PDGFB-201ENST00000331163 RNF144AP50876 292 aaPredicted RBP15.27■□□□□ 0.03
PDGFB-201ENST00000331163 TRAF3Q13114 568 aa15.27■□□□□ 0.03
PDGFB-201ENST00000331163 NFATC4Q14934 902 aa15.27■□□□□ 0.03
PDGFB-201ENST00000331163 WASH2PQ6VEQ5 465 aa15.27■□□□□ 0.03
PDGFB-201ENST00000331163 AMIGO1Q86WK6 493 aa15.27■□□□□ 0.03
PDGFB-201ENST00000331163 OR4N5Q8IXE1 308 aa15.27■□□□□ 0.03
PDGFB-201ENST00000331163 OFCC1Q8IZS5 231 aa15.27■□□□□ 0.03
PDGFB-201ENST00000331163 SMYD1Q8NB12 490 aa15.27■□□□□ 0.03
PDGFB-201ENST00000331163 SMPDL3AQ92484 453 aa15.27■□□□□ 0.03
PDGFB-201ENST00000331163 CD320Q9NPF0 282 aa15.27■□□□□ 0.03
PDGFB-201ENST00000331163 MTCL1Q9Y4B5 1905 aaKnown RBP15.27■□□□□ 0.03
PDGFB-201ENST00000331163 C2orf16Q68DN1 1984 aa15.27■□□□□ 0.03
PDGFB-201ENST00000331163 BNIP3Q12983 259 aa15.26■□□□□ 0.03
PDGFB-201ENST00000331163 KIAA0895LQ68EN5 471 aa15.26■□□□□ 0.03
PDGFB-201ENST00000331163 REP15Q6BDI9 236 aa15.26■□□□□ 0.03
PDGFB-201ENST00000331163 GPR180Q86V85 440 aa15.26■□□□□ 0.03
PDGFB-201ENST00000331163 L3HYPDHQ96EM0 354 aa15.26■□□□□ 0.03
PDGFB-201ENST00000331163 MCMBPQ9BTE3 642 aa15.26■□□□□ 0.03
PDGFB-201ENST00000331163 ABCG4Q9H172 646 aa15.26■□□□□ 0.03
PDGFB-201ENST00000331163 SPNS1Q9H2V7 528 aa15.26■□□□□ 0.03
PDGFB-201ENST00000331163 TAAR2Q9P1P5 351 aa15.26■□□□□ 0.03
PDGFB-201ENST00000331163 RAPGEFL1Q9UHV5 662 aa15.26■□□□□ 0.03
PDGFB-201ENST00000331163 DUSP12Q9UNI6 340 aa15.26■□□□□ 0.03
PDGFB-201ENST00000331163 PPIL1Q9Y3C6 166 aa15.26■□□□□ 0.03
PDGFB-201ENST00000331163 LTBP2Q14767 1821 aa15.26■□□□□ 0.03
PDGFB-201ENST00000331163 USP34Q70CQ2 3546 aa15.26■□□□□ 0.03
PDGFB-201ENST00000331163 A0A1W2PPW3 197 aa15.26■□□□□ 0.03
PDGFB-201ENST00000331163 NPC1O15118 1278 aa15.26■□□□□ 0.03
PDGFB-201ENST00000331163 PCDH7O60245 1069 aa15.26■□□□□ 0.03
PDGFB-201ENST00000331163 MTHFD1P11586 935 aaKnown RBP15.26■□□□□ 0.03
PDGFB-201ENST00000331163 DPP6P42658 865 aa15.26■□□□□ 0.03
PDGFB-201ENST00000331163 CRATP43155 626 aa15.26■□□□□ 0.03
PDGFB-201ENST00000331163 TAS2R50P59544 299 aa15.26■□□□□ 0.03
PDGFB-201ENST00000331163 DCDC1P59894 354 aa15.26■□□□□ 0.03
PDGFB-201ENST00000331163 DEFB134Q4QY38 66 aa15.26■□□□□ 0.03
PDGFB-201ENST00000331163 RBM38Q9H0Z9 239 aaKnown RBP15.26■□□□□ 0.03
PDGFB-201ENST00000331163 ITM2CQ9NQX7 267 aa15.26■□□□□ 0.03
PDGFB-201ENST00000331163 RIMS3Q9UJD0 308 aa15.26■□□□□ 0.03
PDGFB-201ENST00000331163 KIAA1671Q9BY89 1806 aa15.26■□□□□ 0.03
PDGFB-201ENST00000331163 SLC5A10A0PJK1 596 aa15.26■□□□□ 0.03
PDGFB-201ENST00000331163 RFXANKO14593 260 aa15.26■□□□□ 0.03
PDGFB-201ENST00000331163 ZBTB11O95625 1053 aaPredicted RBP15.26■□□□□ 0.03
PDGFB-201ENST00000331163 IL1RNP18510 177 aa15.26■□□□□ 0.03
PDGFB-201ENST00000331163 TMED10P49755 219 aaKnown RBP15.26■□□□□ 0.03
PDGFB-201ENST00000331163 MAPK12P53778 367 aa15.26■□□□□ 0.03
PDGFB-201ENST00000331163 PYCR3Q53H96 274 aa15.26■□□□□ 0.03
PDGFB-201ENST00000331163 PDZD3Q86UT5 571 aa15.26■□□□□ 0.03
PDGFB-201ENST00000331163 ADHFE1Q8IWW8 467 aa15.26■□□□□ 0.03
PDGFB-201ENST00000331163 TBC1D19Q8N5T2 526 aa15.26■□□□□ 0.03
PDGFB-201ENST00000331163 ADCY4Q8NFM4 1077 aa15.26■□□□□ 0.03
PDGFB-201ENST00000331163 LZICQ8WZA0 190 aa15.26■□□□□ 0.03
PDGFB-201ENST00000331163 GSDMCQ9BYG8 508 aa15.26■□□□□ 0.03
PDGFB-201ENST00000331163 ACPTQ9BZG2 426 aa15.26■□□□□ 0.03
PDGFB-201ENST00000331163 GID8Q9NWU2 228 aa15.26■□□□□ 0.03
PDGFB-201ENST00000331163 TSC22D4Q9Y3Q8 395 aa15.26■□□□□ 0.03
PDGFB-201ENST00000331163 SVILO95425 2214 aa15.25■□□□□ 0.03
PDGFB-201ENST00000331163 SLC28A1O00337 649 aa15.25■□□□□ 0.03
PDGFB-201ENST00000331163 SGTAO43765 313 aa15.25■□□□□ 0.03
PDGFB-201ENST00000331163 PRKRAO75569 313 aaKnown RBP15.25■□□□□ 0.03
PDGFB-201ENST00000331163 SLC19A1P41440 591 aa15.25■□□□□ 0.03
PDGFB-201ENST00000331163 SUOXP51687 545 aa15.25■□□□□ 0.03
PDGFB-201ENST00000331163 PFN3P60673 137 aa15.25■□□□□ 0.03
PDGFB-201ENST00000331163 RPE65Q16518 533 aa15.25■□□□□ 0.03
PDGFB-201ENST00000331163 Q6ZSR9 355 aa15.25■□□□□ 0.03
PDGFB-201ENST00000331163 CPSF7Q8N684 471 aaKnown RBP15.25■□□□□ 0.03
PDGFB-201ENST00000331163 SOX17Q9H6I2 414 aaPredicted RBP15.25■□□□□ 0.03
PDGFB-201ENST00000331163 PLGRKTQ9HBL7 147 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms