RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 MIXL1Q9H2W2 232 aa23.48■■□□□ 1.35
SOX1-201ENST00000330949 MRPL39Q9NYK5 338 aaKnown RBP23.48■■□□□ 1.35
SOX1-201ENST00000330949 ZNF451Q9Y4E5 1061 aa23.48■■□□□ 1.35
SOX1-201ENST00000330949 PTCH2Q9Y6C5 1203 aa23.48■■□□□ 1.35
SOX1-201ENST00000330949 FFAR3O14843 346 aa23.47■■□□□ 1.35
SOX1-201ENST00000330949 GPR42O15529 346 aa23.47■■□□□ 1.35
SOX1-201ENST00000330949 PRLP01236 227 aa23.47■■□□□ 1.35
SOX1-201ENST00000330949 ANXA8P13928 327 aa23.47■■□□□ 1.35
SOX1-201ENST00000330949 ZNF250P15622 560 aa23.47■■□□□ 1.35
SOX1-201ENST00000330949 ITGB7P26010 798 aa23.47■■□□□ 1.35
SOX1-201ENST00000330949 DUSP28Q4G0W2 176 aa23.47■■□□□ 1.35
SOX1-201ENST00000330949 IQCCQ4KMZ1 466 aa23.47■■□□□ 1.35
SOX1-201ENST00000330949 TRIM46Q7Z4K8 759 aa23.47■■□□□ 1.35
SOX1-201ENST00000330949 C2orf69Q8N8R5 385 aa23.47■■□□□ 1.35
SOX1-201ENST00000330949 ZNF680Q8NEM1 530 aa23.47■■□□□ 1.35
SOX1-201ENST00000330949 CREB3L4Q8TEY5 395 aa23.47■■□□□ 1.35
SOX1-201ENST00000330949 SLC25A46Q96AG3 418 aa23.47■■□□□ 1.35
SOX1-201ENST00000330949 C8orf48Q96LL4 319 aa23.47■■□□□ 1.35
SOX1-201ENST00000330949 ORC5O43913 435 aa23.47■■□□□ 1.35
SOX1-201ENST00000330949 PRKAR1AP10644 381 aa23.47■■□□□ 1.35
SOX1-201ENST00000330949 KCNE1P15382 129 aa23.47■■□□□ 1.35
SOX1-201ENST00000330949 RPS14P62263 151 aaKnown RBP23.47■■□□□ 1.35
SOX1-201ENST00000330949 WSCD2Q2TBF2 565 aa23.47■■□□□ 1.35
SOX1-201ENST00000330949 C18orf21Q32NC0 220 aaPredicted RBP23.47■■□□□ 1.35
SOX1-201ENST00000330949 ARTNQ5T4W7 220 aa23.47■■□□□ 1.35
SOX1-201ENST00000330949 CD200R1Q8TD46 325 aa23.47■■□□□ 1.35
SOX1-201ENST00000330949 SMARCD1Q96GM5 515 aa23.47■■□□□ 1.35
SOX1-201ENST00000330949 SENP8Q96LD8 212 aa23.47■■□□□ 1.35
SOX1-201ENST00000330949 C2orf49Q9BVC5 232 aaPredicted RBP23.47■■□□□ 1.35
SOX1-201ENST00000330949 CASTOR2A6NHX0 329 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 WASH4PA8MWX3 477 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 NIPSNAP2O75323 286 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 KCNK5O95279 499 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 SLC10A3P09131 477 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 PIRTP0C851 137 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 GLULP15104 373 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 CD9P21926 228 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 CLDN8P56748 225 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 CLDN20P56880 219 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 GALEQ14376 348 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 TRIQKQ629K1 86 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 TEX26Q8N6G2 289 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 OR10G2Q8NGC3 310 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 HMCESQ96FZ2 354 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 QRFPRQ96P65 431 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 FAM240BA0A1B0GVZ2 78 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 TNFRSF11BO00300 401 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 COL6A1P12109 1028 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 ARSBP15848 533 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 CRYBB2P43320 205 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 PPIGQ13427 754 aaKnown RBP eCLIP23.46■■□□□ 1.35
SOX1-201ENST00000330949 KLHL17Q6TDP4 642 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 HSDL2Q6YN16 418 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 RGL4Q8IZJ4 473 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 UMODL1-AS1Q8N2C9 162 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 SLC5A8Q8N695 610 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 ULK4Q96C45 1275 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 TOE1Q96GM8 510 aaKnown RBP23.46■■□□□ 1.35
SOX1-201ENST00000330949 NLE1Q9NVX2 485 aaPredicted RBP23.46■■□□□ 1.35
SOX1-201ENST00000330949 SSR3Q9UNL2 185 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 HYKKA2RU49 373 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 PTGESO14684 152 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 TSPAN4O14817 238 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 ADAMDEC1O15204 470 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 SLC43A1O75387 559 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 PIK3CGP48736 1102 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 TGM4P49221 684 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 CDC42P60953 191 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 ANKS3Q6ZW76 656 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 DDX53Q86TM3 631 aaKnown RBP23.46■■□□□ 1.35
SOX1-201ENST00000330949 FAM9CQ8IZT9 166 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 CLDN22Q8N7P3 220 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 NPLOC4Q8TAT6 608 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 AKAP1Q92667 903 aaKnown RBP eCLIP23.46■■□□□ 1.35
SOX1-201ENST00000330949 ZC4H2Q9NQZ6 224 aa23.46■■□□□ 1.35
SOX1-201ENST00000330949 FARSBQ9NSD9 589 aaKnown RBP23.46■■□□□ 1.35
SOX1-201ENST00000330949 EPOP01588 193 aa23.45■■□□□ 1.34
SOX1-201ENST00000330949 HLA-DQB1P01920 261 aa23.45■■□□□ 1.34
SOX1-201ENST00000330949 SOX3P41225 446 aa23.45■■□□□ 1.34
SOX1-201ENST00000330949 UBXN11Q5T124 520 aa23.45■■□□□ 1.34
SOX1-201ENST00000330949 ZNF648Q5T619 568 aaPredicted RBP23.45■■□□□ 1.34
SOX1-201ENST00000330949 HTATIP2Q9BUP3 242 aa23.45■■□□□ 1.34
SOX1-201ENST00000330949 PPIL3Q9H2H8 161 aaKnown RBP23.45■■□□□ 1.34
SOX1-201ENST00000330949 ZNF224Q9NZL3 707 aa23.45■■□□□ 1.34
SOX1-201ENST00000330949 CLCA3PQ9Y6N3 262 aa23.45■■□□□ 1.34
SOX1-201ENST00000330949 TTC3P53804 2025 aa23.45■■□□□ 1.34
SOX1-201ENST00000330949 LAMA3Q16787 3333 aa23.45■■□□□ 1.34
SOX1-201ENST00000330949 MPZL2O60487 215 aa23.45■■□□□ 1.34
SOX1-201ENST00000330949 IL1AP01583 271 aa23.45■■□□□ 1.34
SOX1-201ENST00000330949 CTSHP09668 335 aa23.45■■□□□ 1.34
SOX1-201ENST00000330949 RGMBQ6NW40 437 aa23.45■■□□□ 1.34
SOX1-201ENST00000330949 ANKRD54Q6NXT1 300 aa23.45■■□□□ 1.34
SOX1-201ENST00000330949 GPR142Q7Z601 462 aa23.45■■□□□ 1.34
SOX1-201ENST00000330949 TINF2Q9BSI4 451 aa23.45■■□□□ 1.34
SOX1-201ENST00000330949 MARVELD1Q9BSK0 173 aa23.45■■□□□ 1.34
SOX1-201ENST00000330949 KATNAL1Q9BW62 490 aa23.45■■□□□ 1.34
SOX1-201ENST00000330949 PADI2Q9Y2J8 665 aa23.45■■□□□ 1.34
SOX1-201ENST00000330949 AGRPO00253 132 aa23.44■■□□□ 1.34
SOX1-201ENST00000330949 CLIC1O00299 241 aa23.44■■□□□ 1.34
SOX1-201ENST00000330949 MOCS2O96007 188 aaPredicted RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms