RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 CTSVO60911 334 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 AHSGP02765 367 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 ALPPP05187 535 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 FDXRP22570 491 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 RPS15AP62244 130 aaKnown RBP6.03□□□□□ -1.44
SMG1-201ENST00000330588 RPS18P62269 152 aaKnown RBP6.03□□□□□ -1.44
SMG1-201ENST00000330588 AP2B1P63010 937 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 CDKL1Q00532 357 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 TIAL1Q01085 375 aaKnown RBP eCLIP6.03□□□□□ -1.44
SMG1-201ENST00000330588 CAV1Q03135 178 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 AIMP2Q13155 320 aaKnown RBP6.03□□□□□ -1.44
SMG1-201ENST00000330588 NDUFA9Q16795 377 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 DEFB110Q30KQ9 67 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 CCSMST1Q4G0I0 132 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 CDKL4Q5MAI5 379 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 TEDDM1Q5T9Z0 273 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 DUPD1Q68J44 220 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 NIPAL1Q6NVV3 410 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 LCTLQ6UWM7 567 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 CLEC18BQ6UXF7 455 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 UBE2R2Q712K3 238 aaPredicted RBP6.03□□□□□ -1.44
SMG1-201ENST00000330588 COX15Q7KZN9 410 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 MAATS1Q7Z4T9 603 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 MTERF4Q7Z6M4 381 aaKnown RBP6.03□□□□□ -1.44
SMG1-201ENST00000330588 STRA8Q7Z7C7 330 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 PALM2Q8IXS6 379 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 MYO1HQ8N1T3 1032 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 ARHGEF39Q8N4T4 335 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 CLEC1AQ8NC01 280 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 CLEC18CQ8NCF0 446 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 FAM13CQ8NE31 585 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 ATL1Q8WXF7 558 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 OR2A5Q96R48 311 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 RUFY1Q96T51 708 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 PKP4Q99569 1192 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 MIPEPQ99797 713 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 HAUS8Q9BT25 410 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 DPH7Q9BTV6 452 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 SGPP1Q9BX95 441 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 KLHL25Q9H0H3 589 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 CLK4Q9HAZ1 481 aaKnown RBP6.03□□□□□ -1.44
SMG1-201ENST00000330588 SLC6A20Q9NP91 592 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 CCDC177Q9NQR7 707 aaPredicted RBP6.03□□□□□ -1.44
SMG1-201ENST00000330588 PRDM7Q9NQW5 492 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 SLC22A11Q9NSA0 550 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 IARS2Q9NSE4 1012 aaKnown RBP6.03□□□□□ -1.44
SMG1-201ENST00000330588 FAM53CQ9NYF3 392 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 MOCS1Q9NZB8 636 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 GALPQ9UBC7 116 aa6.03□□□□□ -1.44
SMG1-201ENST00000330588 DHCR7Q9UBM7 475 aaKnown RBP6.03□□□□□ -1.44
SMG1-201ENST00000330588 FER1L5A0AVI2 2057 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 IGKV1-8A0A0C4DH67 115 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 HYKKA2RU49 373 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 EFCAB8A8MWE9 144 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 SMAD7O15105 426 aaKnown RBP6.02□□□□□ -1.45
SMG1-201ENST00000330588 TP73O15350 636 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 CNOT3O75175 753 aaKnown RBP6.02□□□□□ -1.45
SMG1-201ENST00000330588 SNRNP200O75643 2136 aaKnown RBP6.02□□□□□ -1.45
SMG1-201ENST00000330588 SORBS2O94875 1100 aaKnown RBP6.02□□□□□ -1.45
SMG1-201ENST00000330588 TSPAN12O95859 305 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 UMODP07911 640 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 ERVK-10P10266 1014 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 PSMB5P28074 263 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 GSTM2P28161 218 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 GABRB3P28472 473 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 IMPA1P29218 277 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 ELK3P41970 407 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 ITGA8P53708 1063 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 IL2P60568 153 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 TLE1Q04724 770 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 MGAT5Q09328 741 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 ATP1A4Q13733 1029 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 FASTKQ14296 549 aaKnown RBP6.02□□□□□ -1.45
SMG1-201ENST00000330588 MYBPC3Q14896 1274 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 BBS9Q3SYG4 887 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 DCAF10Q5QP82 559 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 WASHC2DQ5SRD0 308 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 SLC6A19Q695T7 634 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 FBXO42Q6P3S6 717 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 IGFL2Q6UWQ7 119 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 TTLL10Q6ZVT0 673 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 NLRC3Q7RTR2 1065 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 CCDC91Q7Z6B0 441 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 KLHDC8AQ8IYD2 350 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 TEX19Q8NA77 164 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 KCT2Q8NC54 265 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 TM9SF4Q92544 642 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 RERGQ96A58 199 aaPredicted RBP6.02□□□□□ -1.45
SMG1-201ENST00000330588 MIB2Q96AX9 1013 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 FBXL8Q96CD0 374 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 MCMBPQ9BTE3 642 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 TRIM54Q9BYV2 358 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 TRIM55Q9BYV6 548 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 EPN3Q9H201 632 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 PLAC1Q9HBJ0 212 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 ZNF304Q9HCX3 659 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 MKKSQ9NPJ1 570 aaPredicted RBP6.02□□□□□ -1.45
SMG1-201ENST00000330588 P4HTMQ9NXG6 502 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 GPR83Q9NYM4 423 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 STOX2Q9P2F5 926 aaPredicted RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms