RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 BORCS5Q969J3 196 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 NARS2Q96I59 477 aaKnown RBP11.03□□□□□ -0.64
COL4A5-201ENST00000328300 COL21A1Q96P44 957 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 IFT27Q9BW83 186 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 HRASLS2Q9NWW9 162 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 EURLQ9NYK6 297 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 SLC7A8Q9UHI5 535 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 STRCP1A6NGW2 1772 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 BPIP17213 487 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 RAB28P51157 221 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 AP3S2P59780 193 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 GBX1Q14549 363 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 FAM3CQ92520 227 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 PNO1Q9NRX1 252 aaKnown RBP11.03□□□□□ -0.64
COL4A5-201ENST00000328300 AIG1Q9NVV5 245 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 TUBA8Q9NY65 449 aaPredicted RBP11.03□□□□□ -0.64
COL4A5-201ENST00000328300 TAS2R7Q9NYW3 318 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 IKZF2Q9UKS7 526 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 MGAT4BQ9UQ53 548 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 U3KQV3 271 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 PAPPA2Q9BXP8 1791 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 SLX4Q8IY92 1834 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 MEIS3P2A8K0S8 358 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 PRAMEF26H0Y7S4 382 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 CASKO14936 926 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 EEDO75530 441 aaKnown RBP11.03□□□□□ -0.64
COL4A5-201ENST00000328300 SEMA4FO95754 770 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 CD63P08962 238 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 ZNF3P17036 446 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 PREPP48147 710 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 TAZQ16635 292 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.03□□□□□ -0.64
COL4A5-201ENST00000328300 NOXRED1Q6NXP6 359 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 OR2AJ1Q8NGZ0 328 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 SLC39A13Q96H72 371 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 TAS2R9Q9NYW1 312 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 IL17CQ9P0M4 197 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 TMX2-CTNND1H3BSU7 103 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 TP53I11O14683 189 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 TNFRSF4P43489 277 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 SMSP52788 366 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 RPL6Q02878 288 aaKnown RBP11.03□□□□□ -0.64
COL4A5-201ENST00000328300 QPRTQ15274 297 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 AMIGO1Q86WK6 493 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 IZUMO1Q8IYV9 350 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 KDM1BQ8NB78 822 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 TXLNGYQ9BZA5 131 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 PTBP2Q9UKA9 531 aaKnown RBP11.03□□□□□ -0.64
COL4A5-201ENST00000328300 ACVR2AP27037 513 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 UNC50Q53HI1 259 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 ERMP1Q7Z2K6 904 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 NCSTNQ92542 709 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 COX4I2Q96KJ9 171 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 HBEGFQ99075 208 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 PADI2Q9Y2J8 665 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 ZCWPW2A0A1B0GU75 182 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 hCG_2039718K7EN88 272 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 EMC8O43402 210 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 HPRP00739 348 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 C8BP07358 591 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 TARDBPQ13148 414 aaKnown RBP eCLIP11.03□□□□□ -0.64
COL4A5-201ENST00000328300 PLXDC1Q8IUK5 500 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 METTL25Q8N6Q8 603 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 PSMA8Q8TAA3 256 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 UFD1Q92890 307 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 ZNF570Q96NI8 536 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 KCNS3Q9BQ31 491 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 PTGES2Q9H7Z7 377 aa11.03□□□□□ -0.64
COL4A5-201ENST00000328300 PHIPQ8WWQ0 1821 aa11.02□□□□□ -0.64
COL4A5-201ENST00000328300 TNRC6CQ9HCJ0 1690 aaKnown RBP11.02□□□□□ -0.64
COL4A5-201ENST00000328300 AREL1O15033 823 aa11.02□□□□□ -0.64
COL4A5-201ENST00000328300 OR5F1O95221 314 aa11.02□□□□□ -0.64
COL4A5-201ENST00000328300 DBTP11182 482 aaKnown RBP11.02□□□□□ -0.64
COL4A5-201ENST00000328300 ATG14Q6ZNE5 492 aa11.02□□□□□ -0.64
COL4A5-201ENST00000328300 TICAM1Q8IUC6 712 aa11.02□□□□□ -0.64
COL4A5-201ENST00000328300 CNTN4Q8IWV2 1026 aa11.02□□□□□ -0.64
COL4A5-201ENST00000328300 C12orf76Q8N812 135 aaPredicted RBP11.02□□□□□ -0.64
COL4A5-201ENST00000328300 NLGN3Q9NZ94 848 aa11.02□□□□□ -0.64
COL4A5-201ENST00000328300 CCDC182A6NF36 153 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 TOR1BO14657 336 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 KIAA0355O15063 1070 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 RNH1P13489 461 aaKnown RBP11.02□□□□□ -0.65
COL4A5-201ENST00000328300 ARSFP54793 590 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 UFM1P61960 85 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 CDKL1Q00532 357 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 NPTX1Q15818 432 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 KHDC1Q4VXA5 237 aaKnown RBP11.02□□□□□ -0.65
COL4A5-201ENST00000328300 GPR107Q5VW38 600 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 PSAPL1Q6NUJ1 521 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 LGI4Q8N135 537 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 AURKBQ96GD4 344 aaPredicted RBP11.02□□□□□ -0.65
COL4A5-201ENST00000328300 BRF2Q9HAW0 419 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 ACSS2Q9NR19 701 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 SPATA6Q9NWH7 488 aaPredicted RBP11.02□□□□□ -0.65
COL4A5-201ENST00000328300 DLGAP4Q9Y2H0 992 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 PCDHB3Q9Y5E6 796 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 OAS3Q9Y6K5 1087 aaKnown RBP11.02□□□□□ -0.65
COL4A5-201ENST00000328300 CREG1O75629 220 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 ITGB1P05556 798 aa11.02□□□□□ -0.65
COL4A5-201ENST00000328300 MATN1P21941 496 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms