RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 OTULINQ96BN8 352 aa10.24□□□□□ -0.77
CUL4A-201ENST00000326335 PYURFQ96I23 114 aa10.24□□□□□ -0.77
CUL4A-201ENST00000326335 ZNF696Q9H7X3 374 aa10.24□□□□□ -0.77
CUL4A-201ENST00000326335 WDR37Q9Y2I8 494 aa10.24□□□□□ -0.77
CUL4A-201ENST00000326335 GMPPBQ9Y5P6 360 aa10.24□□□□□ -0.77
CUL4A-201ENST00000326335 SMIM31A0A1B0GVY4 71 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 A0A1W2PS29 197 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 ZNF860A6NHJ4 632 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 SLC9A3R1O14745 358 aaPredicted RBP10.23□□□□□ -0.77
CUL4A-201ENST00000326335 PFDN1O60925 122 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 GSTM1P09488 218 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 ZNF30P17039 623 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 PRPS1L1P21108 318 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 MATN1P21941 496 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 MAPK1P28482 360 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 SLC6A12P48065 614 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 ALDH3A2P51648 485 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 TXNL4AP83876 142 aaKnown RBP10.23□□□□□ -0.77
CUL4A-201ENST00000326335 SPIBQ01892 262 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 GSTM4Q03013 218 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 ATP1A4Q13733 1029 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 HIST2H2ACQ16777 129 aaPredicted RBP10.23□□□□□ -0.77
CUL4A-201ENST00000326335 DUOXA1Q1HG43 343 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 HNRNPA1L2Q32P51 320 aaKnown RBP10.23□□□□□ -0.77
CUL4A-201ENST00000326335 PPP2R2DQ66LE6 453 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 HIST2H2AA3Q6FI13 130 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 ERN2Q76MJ5 926 aaKnown RBP10.23□□□□□ -0.77
CUL4A-201ENST00000326335 METTL3Q86U44 580 aaKnown RBP10.23□□□□□ -0.77
CUL4A-201ENST00000326335 CYP4Z1Q86W10 505 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 ADHFE1Q8IWW8 467 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 SHISA5Q8N114 240 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 CLIP4Q8N3C7 705 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 OR9Q2Q8NGE9 314 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 SH3GL1Q99961 368 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 CPPED1Q9BRF8 314 aaPredicted RBP10.23□□□□□ -0.77
CUL4A-201ENST00000326335 SLC2A11Q9BYW1 496 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 MKRN2Q9H000 416 aaKnown RBP10.23□□□□□ -0.77
CUL4A-201ENST00000326335 KCNK12Q9HB15 430 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 FAM118AQ9NWS6 357 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 FBXL12Q9NXK8 326 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 DMTF1Q9Y222 760 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 SNX5Q9Y5X3 404 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 KRBA1A5PL33 1030 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 UPK1AO00322 258 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 BCKDKO14874 412 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 PRAMEF10O60809 474 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 ALPLP05186 524 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 SLC35G4P0C7Q5 338 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 GJA4P35212 333 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 HNMTP50135 292 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 SGCGQ13326 291 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 MAPK11Q15759 364 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 TMIGD1Q6UXZ0 262 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 ZNF540Q8NDQ6 660 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 OR5D16Q8NGK9 328 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 ISG20Q96AZ6 181 aaKnown RBP10.23□□□□□ -0.77
CUL4A-201ENST00000326335 ISOC1Q96CN7 298 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 LYSMD1Q96S90 227 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 QRSL1Q9H0R6 528 aaKnown RBP10.23□□□□□ -0.77
CUL4A-201ENST00000326335 NKX2-4Q9H2Z4 354 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 REEP1Q9H902 201 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 WBP1LQ9NX94 342 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 DNAJB9Q9UBS3 223 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 DOLKQ9UPQ8 538 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 YBX2Q9Y2T7 364 aaKnown RBP10.23□□□□□ -0.77
CUL4A-201ENST00000326335 HEATR5BQ9P2D3 2071 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 SNRNP200O75643 2136 aaKnown RBP10.23□□□□□ -0.77
CUL4A-201ENST00000326335 NFATC1O95644 943 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 KDELR2P33947 212 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 MANFP55145 182 aaKnown RBP10.23□□□□□ -0.77
CUL4A-201ENST00000326335 AP1S2P56377 157 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 FOXM1Q08050 763 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 ELAVL3Q14576 367 aaKnown RBP10.23□□□□□ -0.77
CUL4A-201ENST00000326335 SLC5A12Q1EHB4 618 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 WSCD2Q2TBF2 565 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 PRAMEF13Q5VWM6 474 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 DEF8Q6ZN54 512 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 TECPR1Q7Z6L1 1165 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 TAGAPQ8N103 731 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 DPP10Q8N608 796 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 DDHD1Q8NEL9 900 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 ZCCHC10Q8TBK6 192 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 SMARCD2Q92925 531 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 CEP295NLQ96MC4 621 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 FAM129BQ96TA1 746 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 KCNH6Q9H252 994 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 KRT84Q9NSB2 600 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 RLIMQ9NVW2 624 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 ERVK-18Q9QC07 812 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 RUVBL1Q9Y265 456 aaKnown RBP10.23□□□□□ -0.77
CUL4A-201ENST00000326335 COMMD3-BMI1R4GMX3 469 aa10.23□□□□□ -0.77
CUL4A-201ENST00000326335 LOC100130705A0A1B0GUX0 176 aa10.22□□□□□ -0.77
CUL4A-201ENST00000326335 EPOPA6NHQ4 379 aa10.22□□□□□ -0.77
CUL4A-201ENST00000326335 ISM1B1AKI9 464 aa10.22□□□□□ -0.77
CUL4A-201ENST00000326335 FRS3O43559 492 aa10.22□□□□□ -0.77
CUL4A-201ENST00000326335 ERN1O75460 977 aaKnown RBP10.22□□□□□ -0.77
CUL4A-201ENST00000326335 CBSLP0DN79 551 aa10.22□□□□□ -0.77
CUL4A-201ENST00000326335 PRPS2P11908 318 aa10.22□□□□□ -0.77
CUL4A-201ENST00000326335 CBSP35520 551 aa10.22□□□□□ -0.77
CUL4A-201ENST00000326335 DLX2Q07687 328 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms