RNA–Protein interactions for RNA: ENST00000325617.9

CLGN-201, Transcript of calmegin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLGN, Length 3,043 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-201ENST00000325617 EXOC3L2Q2M3D2 409 aa12.63□□□□□ -0.39
CLGN-201ENST00000325617 TPRG1Q6ZUI0 275 aa12.63□□□□□ -0.39
CLGN-201ENST00000325617 CBLL1Q75N03 491 aa12.63□□□□□ -0.39
CLGN-201ENST00000325617 TMPRSS11BQ86T26 416 aa12.63□□□□□ -0.39
CLGN-201ENST00000325617 OR4A15Q8NGL6 344 aa12.63□□□□□ -0.39
CLGN-201ENST00000325617 IGSF21Q96ID5 467 aa12.63□□□□□ -0.39
CLGN-201ENST00000325617 RIOK2Q9BVS4 552 aaKnown RBP12.63□□□□□ -0.39
CLGN-201ENST00000325617 ATAD3AQ9NVI7 634 aa12.63□□□□□ -0.39
CLGN-201ENST00000325617 HCFC1R1Q9NWW0 138 aa12.63□□□□□ -0.39
CLGN-201ENST00000325617 PRKAB1Q9Y478 270 aa12.63□□□□□ -0.39
CLGN-201ENST00000325617 H3BM21 787 aa12.63□□□□□ -0.39
CLGN-201ENST00000325617 PSMD11O00231 422 aa12.63□□□□□ -0.39
CLGN-201ENST00000325617 CTDSP2O14595 271 aa12.63□□□□□ -0.39
CLGN-201ENST00000325617 DSCR3O14972 297 aa12.63□□□□□ -0.39
CLGN-201ENST00000325617 NDUFB5O43674 189 aa12.63□□□□□ -0.39
CLGN-201ENST00000325617 CNOT3O75175 753 aaKnown RBP12.63□□□□□ -0.39
CLGN-201ENST00000325617 KCNK2O95069 426 aa12.63□□□□□ -0.39
CLGN-201ENST00000325617 SOX14O95416 240 aa12.63□□□□□ -0.39
CLGN-201ENST00000325617 STATHP02808 62 aa12.63□□□□□ -0.39
CLGN-201ENST00000325617 CKMT1AP12532 417 aa12.63□□□□□ -0.39
CLGN-201ENST00000325617 ATP1B2P14415 290 aaPredicted RBP12.63□□□□□ -0.39
CLGN-201ENST00000325617 SLC6A12P48065 614 aa12.63□□□□□ -0.39
CLGN-201ENST00000325617 HBA1P69905 142 aa12.63□□□□□ -0.39
CLGN-201ENST00000325617 DBPQ10586 325 aaPredicted RBP12.63□□□□□ -0.39
CLGN-201ENST00000325617 VEPH1Q14D04 833 aa12.63□□□□□ -0.39
CLGN-201ENST00000325617 ACOX1Q15067 660 aa12.63□□□□□ -0.39
CLGN-201ENST00000325617 CCDC92Q53HC0 331 aaPredicted RBP12.63□□□□□ -0.39
CLGN-201ENST00000325617 CPTPQ5TA50 214 aa12.63□□□□□ -0.39
CLGN-201ENST00000325617 EIF3MQ7L2H7 374 aaKnown RBP12.63□□□□□ -0.39
CLGN-201ENST00000325617 CELF2-AS1Q8N7Q2 184 aa12.63□□□□□ -0.39
CLGN-201ENST00000325617 WDR48Q8TAF3 677 aa12.63□□□□□ -0.39
CLGN-201ENST00000325617 FBLIM1Q8WUP2 373 aa12.63□□□□□ -0.39
CLGN-201ENST00000325617 SLC29A3Q9BZD2 475 aa12.63□□□□□ -0.39
CLGN-201ENST00000325617 WDR12Q9GZL7 423 aaKnown RBP12.63□□□□□ -0.39
CLGN-201ENST00000325617 LINC00597Q9H2U6 94 aa12.63□□□□□ -0.39
CLGN-201ENST00000325617 SPNS1Q9H2V7 528 aa12.63□□□□□ -0.39
CLGN-201ENST00000325617 EXO1Q9UQ84 846 aaKnown RBP12.63□□□□□ -0.39
CLGN-201ENST00000325617 GON4LQ3T8J9 2241 aa12.63□□□□□ -0.39
CLGN-201ENST00000325617 SCN2AQ99250 2005 aa12.63□□□□□ -0.39
CLGN-201ENST00000325617 KIAA0100Q14667 2235 aaKnown RBP12.62□□□□□ -0.39
CLGN-201ENST00000325617 ANTXRLA6NF34 631 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 WWP2O00308 870 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 JUNDP17535 347 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 GPX2P18283 190 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 SERPINB10P48595 397 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 DMC1Q14565 340 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 STARD3Q14849 445 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 SF3B4Q15427 424 aaKnown RBP eCLIP12.62□□□□□ -0.39
CLGN-201ENST00000325617 MED22Q15528 200 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 RPS26P11Q5JNZ5 115 aaPredicted RBP12.62□□□□□ -0.39
CLGN-201ENST00000325617 TMEM53Q6P2H8 277 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.62□□□□□ -0.39
CLGN-201ENST00000325617 CCDC80Q76M96 950 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 HUS1BQ8NHY5 278 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 UBTD2Q8WUN7 234 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 SCRN2Q96FV2 425 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 CDK5RAP1Q96SZ6 601 aaKnown RBP12.62□□□□□ -0.39
CLGN-201ENST00000325617 IL21Q9HBE4 155 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 ERVK13-1Q9NX77 482 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 NDUFAF4Q9P032 175 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 PLAGL1Q9UM63 463 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 MGAT4DA6NG13 374 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 FADS2P1A8MWK0 482 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 NEDD8-MDP1E9PL57 170 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 AP3D1O14617 1153 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 RFPL2O75678 378 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 PRPS1L1P21108 318 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 AZGP1P25311 298 aaKnown RBP12.62□□□□□ -0.39
CLGN-201ENST00000325617 HOXD12P35452 270 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 SOAT1P35610 550 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 LRRC74AQ0VAA2 488 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 ST3GAL4Q11206 333 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 RGNQ15493 299 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 RFX4Q33E94 735 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 C6orf183Q5T699 404 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 AGTRAPQ6RW13 159 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 TSPYL5Q86VY4 417 aaPredicted RBP12.62□□□□□ -0.39
CLGN-201ENST00000325617 CELF5Q8N6W0 485 aaKnown RBP12.62□□□□□ -0.39
CLGN-201ENST00000325617 VANGL1Q8TAA9 524 aaPredicted RBP12.62□□□□□ -0.39
CLGN-201ENST00000325617 TESCQ96BS2 214 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 TPK1Q9H3S4 243 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 RDH14Q9HBH5 336 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 EXOSC4Q9NPD3 245 aaKnown RBP12.62□□□□□ -0.39
CLGN-201ENST00000325617 RAB23Q9ULC3 237 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 SGTAO43765 313 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 TPST2O60704 377 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 APOL3O95236 402 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 OXSR1O95747 527 aaPredicted RBP12.62□□□□□ -0.39
CLGN-201ENST00000325617 SPINT3P49223 89 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 SMARCB1Q12824 385 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 ILF2Q12905 390 aaKnown RBP12.62□□□□□ -0.39
CLGN-201ENST00000325617 ELAVL2Q12926 359 aaKnown RBP12.62□□□□□ -0.39
CLGN-201ENST00000325617 PPIGQ13427 754 aaKnown RBP eCLIP12.62□□□□□ -0.39
CLGN-201ENST00000325617 SERPINA11Q86U17 422 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 LYSMD2Q8IV50 215 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 LGI4Q8N135 537 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 OR10G2Q8NGC3 310 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 RHOXF1Q8NHV9 184 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 NEIL2Q969S2 332 aa12.62□□□□□ -0.39
CLGN-201ENST00000325617 PKP4Q99569 1192 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms