RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 TESCQ96BS2 214 aa12.42□□□□□ -0.42
HMGCS1-201ENST00000325110 VN1R3Q9BXE9 311 aa12.42□□□□□ -0.42
HMGCS1-201ENST00000325110 CEP44Q9C0F1 390 aa12.42□□□□□ -0.42
HMGCS1-201ENST00000325110 C14orf119Q9NWQ9 140 aa12.42□□□□□ -0.42
HMGCS1-201ENST00000325110 SRRDQ9UH36 339 aa12.42□□□□□ -0.42
HMGCS1-201ENST00000325110 OR51B4Q9Y5P0 310 aa12.42□□□□□ -0.42
HMGCS1-201ENST00000325110 KIAA0100Q14667 2235 aaKnown RBP12.42□□□□□ -0.42
HMGCS1-201ENST00000325110 GON4LQ3T8J9 2241 aa12.42□□□□□ -0.42
HMGCS1-201ENST00000325110 TRBV5-3A0A0A0MS03 114 aa12.42□□□□□ -0.42
HMGCS1-201ENST00000325110 H3BM21 787 aa12.42□□□□□ -0.42
HMGCS1-201ENST00000325110 CST5P28325 142 aaPredicted RBP12.42□□□□□ -0.42
HMGCS1-201ENST00000325110 SCARB2Q14108 478 aa12.42□□□□□ -0.42
HMGCS1-201ENST00000325110 GBX1Q14549 363 aa12.42□□□□□ -0.42
HMGCS1-201ENST00000325110 ZNF783Q6ZMS7 281 aa12.42□□□□□ -0.42
HMGCS1-201ENST00000325110 AP2M1Q96CW1 435 aa12.42□□□□□ -0.42
HMGCS1-201ENST00000325110 ELAC1Q9H777 363 aaKnown RBP12.42□□□□□ -0.42
HMGCS1-201ENST00000325110 TFECO14948 347 aaPredicted RBP12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 ADAMDEC1O15204 470 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 TEX28O15482 410 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 KLK1P06870 262 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 ELFN1P0C7U0 828 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 CD22P20273 847 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 AP1S2P56377 157 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 OXA1LQ15070 435 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 RGNQ15493 299 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 IFI44LQ53G44 452 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 GCNT6Q5T4J0 391 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 GDPD4Q6W3E5 623 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 DEF8Q6ZN54 512 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 CBLL1Q75N03 491 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 PRSS48Q7RTY5 328 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 FAM217AQ8IXS0 508 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 OR7G3Q8NG95 312 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 ZNF675Q8TD23 568 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 OTUB1Q96FW1 271 aaPredicted RBP12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 TMEM175Q9BSA9 504 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 SORBS1Q9BX66 1292 aaKnown RBP12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 DUSP21Q9H596 190 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 MS4A12Q9NXJ0 267 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 PLAGL1Q9UM63 463 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 MAN2B2Q9Y2E5 1009 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 SYNDIG1LA6NDD5 238 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 LEFTY1O75610 366 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 SOD2P04179 222 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 CD40LGP29965 261 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 TAS2R50P59544 299 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 PFN3P60673 137 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 KEAP1Q14145 624 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 PROX2Q3B8N5 592 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 GAREM2Q75VX8 874 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 CHPFQ8IZ52 775 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 ALG14Q96F25 216 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 NIPSNAP1Q9BPW8 284 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 GPC6Q9Y625 555 aaPredicted RBP12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 CFAP20Q9Y6A4 193 aaKnown RBP12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 VWA8A3KMH1 1905 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 LEFTY2O00292 366 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 SCAMP2O15127 329 aaKnown RBP12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 ASNA1O43681 348 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 MFN2O95140 757 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 STATHP02808 62 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 ALOX5P09917 674 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 CKMT1AP12532 417 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 HOXA9P31269 272 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 TCEA2Q15560 299 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 TSTQ16762 297 aaKnown RBP12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 HIST2H2AA3Q6FI13 130 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 ARMC8Q8IUR7 673 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 SLC34A3Q8N130 599 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 UBE2J2Q8N2K1 259 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 FAM83FQ8NEG4 500 aaPredicted RBP12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 UBTD2Q8WUN7 234 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 NEIL2Q969S2 332 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 DEFB118Q96PH6 123 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 YME1L1Q96TA2 773 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 DOHHQ9BU89 302 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 MROQ9BYG7 248 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 C5AR2Q9P296 337 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 CCL26Q9Y258 94 aa12.41□□□□□ -0.42
HMGCS1-201ENST00000325110 TRBV5-4A0A0C4DH59 114 aa12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 PSMD11O00231 422 aa12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 GFRA2O00451 464 aa12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 OR10H3O60404 316 aa12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 GADD45GO95257 159 aa12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 RPLP0P05388 317 aaKnown RBP12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 ITGA1P56199 1179 aa12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 CDC42P60953 191 aa12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 HBA1P69905 142 aa12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 ZNF697Q5TEC3 545 aa12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 ANXA8L1Q5VT79 327 aa12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 MED27Q6P2C8 311 aa12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 CCDC71Q8IV32 467 aaPredicted RBP12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 AQP11Q8NBQ7 271 aa12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 ATL1Q8WXF7 558 aa12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 RAB8BQ92930 207 aa12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 IL17FQ96PD4 163 aa12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 AKIP1Q9NQ31 210 aa12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 TMEM184CQ9NVA4 438 aa12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 STOX2Q9P2F5 926 aaPredicted RBP12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 TRPC4Q9UBN4 977 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms