RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 SLCO2A1Q92959 643 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 FCRL4Q96PJ5 515 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 LRRC3Q9BY71 257 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 U3KQ87 197 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 NUP98P52948 1817 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 F5H0A9 414 aaPredicted RBP9.46□□□□□ -0.9
COL12A1-201ENST00000322507 KIAA0355O15063 1070 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 SLC7A4O43246 635 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 MAGP20916 626 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 DNASE1P24855 282 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 MAOBP27338 520 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 TAS2R50P59544 299 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 SLC1A5Q15758 541 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 ZNF572Q7Z3I7 529 aaPredicted RBP9.46□□□□□ -0.9
COL12A1-201ENST00000322507 RAVER1Q8IY67 606 aaKnown RBP9.46□□□□□ -0.9
COL12A1-201ENST00000322507 FIBCD1Q8N539 461 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 PEX13Q92968 403 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 COQ10AQ96MF6 247 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 YIPF4Q9BSR8 244 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.46□□□□□ -0.9
COL12A1-201ENST00000322507 TBC1D17Q9HA65 648 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 ABHD14A-ACY1A0A1B0GW23 586 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 OR2AG2A6NM03 316 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 RYKP34925 604 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 DGKGP49619 791 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 MPP1Q00013 466 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 APOBEC3HQ6NTF7 200 aaKnown RBP9.46□□□□□ -0.9
COL12A1-201ENST00000322507 FAM84AQ96KN4 292 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 UBTD1Q9HAC8 227 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 ZNF286AQ9HBT8 521 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 PRKACGP22612 351 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 GMPRP36959 345 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 HIST2H3AQ71DI3 136 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 ZNF227Q86WZ6 799 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 FUBP3Q96I24 572 aaKnown RBP eCLIP9.46□□□□□ -0.9
COL12A1-201ENST00000322507 NPAP1Q9NZP6 1156 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 PDP1Q9P0J1 537 aaPredicted RBP9.46□□□□□ -0.9
COL12A1-201ENST00000322507 CD300AQ9UGN4 299 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 GTF2IRD1Q9UHL9 959 aa9.46□□□□□ -0.9
COL12A1-201ENST00000322507 RFPL2O75678 378 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 MMAAQ8IVH4 418 aaKnown RBP9.45□□□□□ -0.9
COL12A1-201ENST00000322507 KCNN1Q92952 543 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 NMNAT1Q9HAN9 279 aaPredicted RBP9.45□□□□□ -0.9
COL12A1-201ENST00000322507 NIT2Q9NQR4 276 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 VSX1Q9NZR4 365 aaPredicted RBP9.45□□□□□ -0.9
COL12A1-201ENST00000322507 H7C417 338 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 GABRDO14764 452 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 ZNF254O75437 659 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 PAGE1O75459 146 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 UBBP0CG47 229 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 UBCP0CG48 685 aaKnown RBP9.45□□□□□ -0.9
COL12A1-201ENST00000322507 L1CAMP32004 1257 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 RPS27AP62979 156 aaKnown RBP9.45□□□□□ -0.9
COL12A1-201ENST00000322507 UBA52P62987 128 aaKnown RBP9.45□□□□□ -0.9
COL12A1-201ENST00000322507 TXNL4AP83876 142 aaKnown RBP9.45□□□□□ -0.9
COL12A1-201ENST00000322507 COPS5Q92905 334 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 P2RY11Q96G91 374 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 FAIMQ9NVQ4 179 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 MRPS17Q9Y2R5 130 aaKnown RBP9.45□□□□□ -0.9
COL12A1-201ENST00000322507 DDTLA6NHG4 134 aaPredicted RBP9.45□□□□□ -0.9
COL12A1-201ENST00000322507 AQP12BA6NM10 295 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 LRRN3E7EW58 273 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 APODP05090 189 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 PRKCGP05129 697 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 CPSF6Q16630 551 aaKnown RBP eCLIP9.45□□□□□ -0.9
COL12A1-201ENST00000322507 PAN3Q58A45 887 aaKnown RBP9.45□□□□□ -0.9
COL12A1-201ENST00000322507 CES3Q6UWW8 571 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 DCP2Q8IU60 420 aaKnown RBP9.45□□□□□ -0.9
COL12A1-201ENST00000322507 AQP12AQ8IXF9 295 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 GTPBP8Q8N3Z3 284 aaPredicted RBP9.45□□□□□ -0.9
COL12A1-201ENST00000322507 ANAPC16Q96DE5 110 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 LRRN3Q9H3W5 708 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 GPSM3Q9Y4H4 160 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 SCN11AQ9UI33 1791 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 LRRC72A6NJI9 287 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 GATCO43716 136 aaKnown RBP9.45□□□□□ -0.9
COL12A1-201ENST00000322507 CBSLP0DN79 551 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 PKMP14618 531 aaKnown RBP9.45□□□□□ -0.9
COL12A1-201ENST00000322507 CTPS1P17812 591 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 CBSP35520 551 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 DACT2Q5SW24 774 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 PRSS55Q6UWB4 352 aaPredicted RBP9.45□□□□□ -0.9
COL12A1-201ENST00000322507 FCRL2Q96LA5 508 aaPredicted RBP9.45□□□□□ -0.9
COL12A1-201ENST00000322507 ZNF599Q96NL3 588 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 CDK15Q96Q40 435 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 COL14A1Q05707 1796 aaKnown RBP9.45□□□□□ -0.9
COL12A1-201ENST00000322507 GLUD1P00367 558 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 ADRA1BP35368 520 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 C9orf64Q5T6V5 341 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 GLYATQ6IB77 296 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 RELL1Q8IUW5 271 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 RASGRP3Q8IV61 690 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 TWIST2Q8WVJ9 160 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 HAS1Q92839 578 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 RBM18Q96H35 190 aaKnown RBP9.45□□□□□ -0.9
COL12A1-201ENST00000322507 WRAP53Q9BUR4 548 aaKnown RBP9.45□□□□□ -0.9
COL12A1-201ENST00000322507 SMCO4Q9NRQ5 59 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 HCN2Q9UL51 889 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 TEX13CA0A0J9YWL9 993 aa9.45□□□□□ -0.9
COL12A1-201ENST00000322507 NDUFS8O00217 210 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms