RNA–Protein interactions for RNA: ENST00000321110.1

RTL3-201, Transcript of retrotransposon Gag like 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RTL3, Length 2,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3-201ENST00000321110 SLC39A8Q9C0K1 460 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 SLC6A17Q9H1V8 727 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 NXF3Q9H4D5 531 aaKnown RBP7.67□□□□□ -1.18
RTL3-201ENST00000321110 CDCP1Q9H5V8 836 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 CLMPQ9H6B4 373 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 ZNF408Q9H9D4 720 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 POPDC3Q9HBV1 291 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 MRPL39Q9NYK5 338 aaKnown RBP7.67□□□□□ -1.18
RTL3-201ENST00000321110 ENOPH1Q9UHY7 261 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 LSM2Q9Y333 95 aaKnown RBP7.67□□□□□ -1.18
RTL3-201ENST00000321110 FKBP7Q9Y680 259 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 COL11A1P12107 1806 aaPredicted RBP7.67□□□□□ -1.18
RTL3-201ENST00000321110 A0A0A6YYJ9 748 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 HYKKA2RU49 373 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 LCHNA4D1U4 455 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 PRR23AA6NEV1 266 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 WNT9AO14904 365 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 TREHO43280 583 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 LDB2O43679 373 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 HCN1O60741 890 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 IL6P05231 212 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 PRKAR1AP10644 381 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 MAXP61244 160 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 ERVK-21P61565 698 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.67□□□□□ -1.18
RTL3-201ENST00000321110 TAF12Q16514 161 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 SPDYE7PQ495Y7 208 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 KLHL22Q53GT1 634 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 LRIF1Q5T3J3 769 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 TRIQKQ629K1 86 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 PDE12Q6L8Q7 609 aaKnown RBP7.67□□□□□ -1.18
RTL3-201ENST00000321110 EFCAB12Q6NXP0 572 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 MZT2BQ6NZ67 158 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 CATSPERGQ6ZRH7 1159 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 DDX53Q86TM3 631 aaKnown RBP7.67□□□□□ -1.18
RTL3-201ENST00000321110 METTL3Q86U44 580 aaKnown RBP7.67□□□□□ -1.18
RTL3-201ENST00000321110 IFNL1Q8IU54 200 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 RASGRP3Q8IV61 690 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 SLC5A8Q8N695 610 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 OR7G3Q8NG95 312 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 OR11H7Q8NGC8 314 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 WDR48Q8TAF3 677 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.67□□□□□ -1.18
RTL3-201ENST00000321110 POP5Q969H6 163 aaKnown RBP7.67□□□□□ -1.18
RTL3-201ENST00000321110 KIAA1143Q96AT1 154 aaPredicted RBP7.67□□□□□ -1.18
RTL3-201ENST00000321110 ZSWIM3Q96MP5 696 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 REG4Q9BYZ8 158 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 ULBP1Q9BZM6 244 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 PPP1R3EQ9H7J1 279 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 SLCO1C1Q9NYB5 712 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 UBQLN2Q9UHD9 624 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 CLEC2DQ9UHP7 191 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 ZNF214Q9UL59 606 aaPredicted RBP7.67□□□□□ -1.18
RTL3-201ENST00000321110 DUSP12Q9UNI6 340 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 ING4Q9UNL4 249 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 COPS3Q9UNS2 423 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 MRPS7Q9Y2R9 242 aaKnown RBP7.67□□□□□ -1.18
RTL3-201ENST00000321110 CDH10Q9Y6N8 788 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 SBF1O95248 1867 aa7.67□□□□□ -1.18
RTL3-201ENST00000321110 A0A1B0GVM2 712 aa7.66□□□□□ -1.18
RTL3-201ENST00000321110 RHOBTB1O94844 696 aa7.66□□□□□ -1.18
RTL3-201ENST00000321110 AP2A2O94973 939 aa7.66□□□□□ -1.18
RTL3-201ENST00000321110 LGI1O95970 557 aa7.66□□□□□ -1.18
RTL3-201ENST00000321110 IFNA7P01567 189 aa7.66□□□□□ -1.18
RTL3-201ENST00000321110 SRCP12931 536 aa7.66□□□□□ -1.18
RTL3-201ENST00000321110 ITGALP20701 1170 aa7.66□□□□□ -1.18
RTL3-201ENST00000321110 LHCGRP22888 699 aa7.66□□□□□ -1.18
RTL3-201ENST00000321110 PSMA1P25786 263 aaKnown RBP7.66□□□□□ -1.18
RTL3-201ENST00000321110 PIK3CGP48736 1102 aa7.66□□□□□ -1.18
RTL3-201ENST00000321110 HMGCS1Q01581 520 aa7.66□□□□□ -1.18
RTL3-201ENST00000321110 CSTF3Q12996 717 aaKnown RBP7.66□□□□□ -1.18
RTL3-201ENST00000321110 ZNF284Q2VY69 593 aa7.66□□□□□ -1.18
RTL3-201ENST00000321110 LGALSLQ3ZCW2 172 aaPredicted RBP7.66□□□□□ -1.18
RTL3-201ENST00000321110 ZNF628Q5EBL2 1059 aa7.66□□□□□ -1.18
RTL3-201ENST00000321110 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.66□□□□□ -1.18
RTL3-201ENST00000321110 DDI2Q5TDH0 399 aa7.66□□□□□ -1.18
RTL3-201ENST00000321110 PLAG1Q6DJT9 500 aa7.66□□□□□ -1.18
RTL3-201ENST00000321110 DOK6Q6PKX4 331 aa7.66□□□□□ -1.18
RTL3-201ENST00000321110 GDPGP1Q6ZNW5 385 aa7.66□□□□□ -1.18
RTL3-201ENST00000321110 PAQR9Q6ZVX9 377 aa7.66□□□□□ -1.18
RTL3-201ENST00000321110 EIF3MQ7L2H7 374 aaKnown RBP7.66□□□□□ -1.18
RTL3-201ENST00000321110 CHMP1BQ7LBR1 199 aa7.66□□□□□ -1.18
RTL3-201ENST00000321110 ZNF655Q8N720 491 aaPredicted RBP7.66□□□□□ -1.18
RTL3-201ENST00000321110 OR4F6Q8NGB9 312 aa7.66□□□□□ -1.18
RTL3-201ENST00000321110 EDEM1Q92611 657 aa7.66□□□□□ -1.18
RTL3-201ENST00000321110 MTERF3Q96E29 417 aa7.66□□□□□ -1.18
RTL3-201ENST00000321110 C7orf34Q96L11 122 aa7.66□□□□□ -1.18
RTL3-201ENST00000321110 NIPSNAP1Q9BPW8 284 aa7.66□□□□□ -1.18
RTL3-201ENST00000321110 FDXACB1Q9BRP7 624 aaPredicted RBP7.66□□□□□ -1.18
RTL3-201ENST00000321110 DUSP16Q9BY84 665 aa7.66□□□□□ -1.18
RTL3-201ENST00000321110 SIK2Q9H0K1 926 aa7.66□□□□□ -1.18
RTL3-201ENST00000321110 CRISPLD1Q9H336 500 aa7.66□□□□□ -1.18
RTL3-201ENST00000321110 WDCPQ9H6R7 721 aa7.66□□□□□ -1.18
RTL3-201ENST00000321110 SLC28A3Q9HAS3 691 aa7.66□□□□□ -1.18
RTL3-201ENST00000321110 FANCFQ9NPI8 374 aa7.66□□□□□ -1.18
RTL3-201ENST00000321110 SLC35C2Q9NQQ7 365 aa7.66□□□□□ -1.18
RTL3-201ENST00000321110 SEC14L4Q9UDX3 406 aa7.66□□□□□ -1.18
RTL3-201ENST00000321110 STUB1Q9UNE7 303 aa7.66□□□□□ -1.18
RTL3-201ENST00000321110 A0A1W2PPL8 197 aa7.66□□□□□ -1.18
RTL3-201ENST00000321110 SLC22A23A1A5C7 686 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms