RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 POGLUT1Q8NBL1 392 aa16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 NDRG1Q92597 394 aaKnown RBP16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 FBXL20Q96IG2 436 aa16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 ZCCHC3Q9NUD5 404 aaKnown RBP16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 PORP16435 677 aaPredicted RBP16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 MATN1P21941 496 aa16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 CAV3P56539 151 aa16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 ST3GAL4Q11206 333 aa16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 PYROXD2Q8N2H3 581 aa16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 TRMT61BQ9BVS5 477 aaKnown RBP16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 FKBPLQ9UIM3 349 aa16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 EIF1AYO14602 144 aaKnown RBP16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 FARS2O95363 451 aaKnown RBP16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 CSNK2A2P19784 350 aaPredicted RBP16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 EIF1AXP47813 144 aaKnown RBP16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 MTFR2Q6P444 385 aa16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 PSMG2Q969U7 264 aa16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 PAK1IP1Q9NWT1 392 aaPredicted RBP16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 TIMM8BQ9Y5J9 83 aaPredicted RBP16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 TNFRSF10BO14763 440 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 IFNA4P05014 189 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 GTF2F2P13984 249 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 RBMXP38159 391 aaKnown RBP16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 CLCN2P51788 898 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 ENDOVQ8N8Q3 282 aaKnown RBP16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 ACBD6Q9BR61 282 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.37■□□□□ 0.212e-6■■■■□ 25.9
SMCHD1-201ENST00000320876 PNO1Q9NRX1 252 aaKnown RBP16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 PCDHGA8Q9Y5G5 932 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 PCM1Q15154 2024 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 SFTPBP07988 381 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 SSTP61278 116 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 ZUFSPQ96AP4 578 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 EFCAB11Q9BUY7 163 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 POTEKPQ9BYX7 375 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 STXBP5LQ9Y2K9 1186 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 CASRP41180 1078 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 TRMT10BQ6PF06 316 aaKnown RBP16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 BEND4Q6ZU67 534 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 LAS2Q8IYD9 372 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 UBQLNLQ8IYU4 475 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 OR5AK3PQ8NH89 298 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 TRIM64BA6NI03 449 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 CAPN5O15484 640 aaPredicted RBP16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 ITM2AO43736 263 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 CDKN2CP42773 168 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 RAD9AQ99638 391 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 MTG2Q9H4K7 406 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 COL20A1Q9P218 1284 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 MON2Q7Z3U7 1717 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 OR2B3O76000 313 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 GSK3BP49841 420 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 BLKP51451 505 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 C7orf61Q8IZ16 206 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 CDCA5Q96FF9 252 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 PCED1BQ96HM7 432 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 ADAM7Q9H2U9 754 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 CENPMQ9NSP4 180 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 ERVK-19Q9WJR5 959 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 SDK1Q7Z5N4 2213 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 NUP214P35658 2090 aaPredicted RBP16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 TVP23AA6NH52 213 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 PSD4Q8NDX1 1056 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 NUS1Q96E22 293 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 DUS2Q9NX74 493 aaKnown RBP16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 HCN4Q9Y3Q4 1203 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 PCDHB14Q9Y5E9 798 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 BHMG1C9JSJ3 638 aaPredicted RBP16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 F5H0A9 414 aaPredicted RBP16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 INMT-MINDY4F8WBC2 141 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 MAGEA6P43360 314 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 TAS2R39P59534 338 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 CYBRD1Q53TN4 286 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 CMTM7Q96FZ5 175 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 TTYH3Q9C0H2 523 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 IFT52Q9Y366 437 aa16.37■□□□□ 0.21
SMCHD1-201ENST00000320876 HSBP1L1C9JCN9 74 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 ACTA2P62736 377 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 ACTG2P63267 376 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 ATP6AP1Q15904 470 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 GPR142Q7Z601 462 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 TMEM41AQ96HV5 264 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 RPH3AQ9Y2J0 694 aaPredicted RBP16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 TMEM131LA2VDJ0 1609 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 EEF1E1O43324 174 aaKnown RBP16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 CAPN3P20807 821 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 SLBPQ14493 270 aaKnown RBP eCLIP16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 ATAD3CQ5T2N8 411 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 SLC15A3Q8IY34 581 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 MGAT4CQ9UBM8 478 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 PLATP00750 562 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 UQCRC1P31930 480 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 GABARAPL2P60520 117 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 ACTC1P68032 377 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 ACTA1P68133 377 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 NOCTQ9UK39 431 aaKnown RBP16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 FAM170BA6NMN3 283 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 UAP1L1Q3KQV9 507 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 FAM198BQ6UWH4 519 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 DNAJC27Q9NZQ0 273 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms