RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 CTNNAL1Q9UBT7 734 aa16.77■□□□□ 0.28
TPM1-203ENST00000317516 PLEKHB1Q9UF11 243 aaPredicted RBP16.77■□□□□ 0.28
TPM1-203ENST00000317516 MAST4O15021 2626 aa16.77■□□□□ 0.27
TPM1-203ENST00000317516 CDC7O00311 574 aa16.76■□□□□ 0.27
TPM1-203ENST00000317516 EIF3HO15372 352 aaKnown RBP eCLIP16.76■□□□□ 0.27
TPM1-203ENST00000317516 RDH16O75452 317 aa16.76■□□□□ 0.27
TPM1-203ENST00000317516 SEC24DO94855 1032 aaPredicted RBP16.76■□□□□ 0.27
TPM1-203ENST00000317516 ITGAMP11215 1152 aa16.76■□□□□ 0.27
TPM1-203ENST00000317516 EDN3P14138 238 aa16.76■□□□□ 0.27
TPM1-203ENST00000317516 ALOX12P18054 663 aa16.76■□□□□ 0.27
TPM1-203ENST00000317516 SCTRP47872 440 aa16.76■□□□□ 0.27
TPM1-203ENST00000317516 TNFSF10P50591 281 aa16.76■□□□□ 0.27
TPM1-203ENST00000317516 TAS2R39P59534 338 aa16.76■□□□□ 0.27
TPM1-203ENST00000317516 SNRPNP63162 240 aaKnown RBP16.76■□□□□ 0.27
TPM1-203ENST00000317516 POU4F1Q01851 419 aa16.76■□□□□ 0.27
TPM1-203ENST00000317516 ACTN3Q08043 901 aaPredicted RBP16.76■□□□□ 0.27
TPM1-203ENST00000317516 FASTKD3Q14CZ7 662 aaKnown RBP16.76■□□□□ 0.27
TPM1-203ENST00000317516 NSDHLQ15738 373 aa16.76■□□□□ 0.27
TPM1-203ENST00000317516 INAQ16352 499 aa16.76■□□□□ 0.27
TPM1-203ENST00000317516 PPP1R3AQ16821 1122 aa16.76■□□□□ 0.27
TPM1-203ENST00000317516 BTBD16Q32M84 506 aa16.76■□□□□ 0.27
TPM1-203ENST00000317516 C4orf17Q53FE4 359 aa16.76■□□□□ 0.27
TPM1-203ENST00000317516 FRA10AC1Q70Z53 315 aa16.76■□□□□ 0.27
TPM1-203ENST00000317516 ADAMTSL2Q86TH1 951 aa16.76■□□□□ 0.27
TPM1-203ENST00000317516 AFAP1L2Q8N4X5 818 aa16.76■□□□□ 0.27
TPM1-203ENST00000317516 ZNF740Q8NDX6 193 aa16.76■□□□□ 0.27
TPM1-203ENST00000317516 PLPP5Q8NEB5 264 aa16.76■□□□□ 0.27
TPM1-203ENST00000317516 SPATA4Q8NEY3 305 aa16.76■□□□□ 0.27
TPM1-203ENST00000317516 NT5CQ8TCD5 201 aa16.76■□□□□ 0.27
TPM1-203ENST00000317516 TSPAN17Q96FV3 270 aa16.76■□□□□ 0.27
TPM1-203ENST00000317516 MAGEB10Q96LZ2 347 aaPredicted RBP16.76■□□□□ 0.27
TPM1-203ENST00000317516 RNF32Q9H0A6 362 aa16.76■□□□□ 0.27
TPM1-203ENST00000317516 PELI2Q9HAT8 420 aa16.76■□□□□ 0.27
TPM1-203ENST00000317516 SLC22A14Q9Y267 594 aa16.76■□□□□ 0.27
TPM1-203ENST00000317516 OARD1Q9Y530 152 aa16.76■□□□□ 0.27
TPM1-203ENST00000317516 SHANK1Q9Y566 2161 aa16.76■□□□□ 0.27
TPM1-203ENST00000317516 HEATR5BQ9P2D3 2071 aa16.76■□□□□ 0.27
TPM1-203ENST00000317516 GALR3O60755 368 aaPredicted RBP16.75■□□□□ 0.27
TPM1-203ENST00000317516 H2AFYO75367 372 aaKnown RBP16.75■□□□□ 0.27
TPM1-203ENST00000317516 JAK1P23458 1154 aa16.75■□□□□ 0.27
TPM1-203ENST00000317516 RBBP5Q15291 538 aaKnown RBP16.75■□□□□ 0.27
TPM1-203ENST00000317516 EXT1Q16394 746 aa16.75■□□□□ 0.27
TPM1-203ENST00000317516 DEFB134Q4QY38 66 aa16.75■□□□□ 0.27
TPM1-203ENST00000317516 NXPE4Q6UWF7 544 aa16.75■□□□□ 0.27
TPM1-203ENST00000317516 CYS1Q717R9 158 aa16.75■□□□□ 0.27
TPM1-203ENST00000317516 ANKRD37Q7Z713 158 aa16.75■□□□□ 0.27
TPM1-203ENST00000317516 PDSS2Q86YH6 399 aa16.75■□□□□ 0.27
TPM1-203ENST00000317516 TBC1D20Q96BZ9 403 aa16.75■□□□□ 0.27
TPM1-203ENST00000317516 PEX11GQ96HA9 241 aa16.75■□□□□ 0.27
TPM1-203ENST00000317516 ZNF354BQ96LW1 612 aa16.75■□□□□ 0.27
TPM1-203ENST00000317516 TSNARE1Q96NA8 513 aa16.75■□□□□ 0.27
TPM1-203ENST00000317516 CAPS2Q9BXY5 557 aa16.75■□□□□ 0.27
TPM1-203ENST00000317516 SAYSD1Q9NPB0 183 aa16.75■□□□□ 0.27
TPM1-203ENST00000317516 OLAHQ9NV23 265 aa16.75■□□□□ 0.27
TPM1-203ENST00000317516 ABI3Q9P2A4 366 aa16.75■□□□□ 0.27
TPM1-203ENST00000317516 ERRFI1Q9UJM3 462 aaPredicted RBP16.75■□□□□ 0.27
TPM1-203ENST00000317516 IKZF3Q9UKT9 509 aa16.75■□□□□ 0.27
TPM1-203ENST00000317516 SPTAN1Q13813 2472 aaKnown RBP16.74■□□□□ 0.27
TPM1-203ENST00000317516 NAV2Q8IVL1 2488 aa16.74■□□□□ 0.27
TPM1-203ENST00000317516 IGHV3-20A0A0C4DH32 117 aa16.74■□□□□ 0.27
TPM1-203ENST00000317516 NPEPPSL1A6NEC2 478 aa16.74■□□□□ 0.27
TPM1-203ENST00000317516 A8MUI8 341 aa16.74■□□□□ 0.27
TPM1-203ENST00000317516 MAGEB17A8MXT2 336 aa16.74■□□□□ 0.27
TPM1-203ENST00000317516 WDPCPO95876 746 aa16.74■□□□□ 0.27
TPM1-203ENST00000317516 CELA2AP08217 269 aa16.74■□□□□ 0.27
TPM1-203ENST00000317516 GNAZP19086 355 aa16.74■□□□□ 0.27
TPM1-203ENST00000317516 CASQ1P31415 396 aa16.74■□□□□ 0.27
TPM1-203ENST00000317516 EFNA3P52797 238 aa16.74■□□□□ 0.27
TPM1-203ENST00000317516 ZNF33BQ06732 778 aa16.74■□□□□ 0.27
TPM1-203ENST00000317516 ABRAXAS2Q15018 415 aa16.74■□□□□ 0.27
TPM1-203ENST00000317516 CAPN12Q6ZSI9 719 aa16.74■□□□□ 0.27
TPM1-203ENST00000317516 LANCL3Q6ZV70 420 aa16.74■□□□□ 0.27
TPM1-203ENST00000317516 TMPRSS11BQ86T26 416 aa16.74■□□□□ 0.27
TPM1-203ENST00000317516 M1APQ8TC57 530 aa16.74■□□□□ 0.27
TPM1-203ENST00000317516 MOCOSQ96EN8 888 aa16.74■□□□□ 0.27
TPM1-203ENST00000317516 LPAR4Q99677 370 aa16.74■□□□□ 0.27
TPM1-203ENST00000317516 DPH5Q9H2P9 285 aa16.74■□□□□ 0.27
TPM1-203ENST00000317516 UTP11Q9Y3A2 253 aaKnown RBP16.74■□□□□ 0.27
TPM1-203ENST00000317516 SPTBN1Q01082 2364 aaKnown RBP16.73■□□□□ 0.27
TPM1-203ENST00000317516 OR5H15A6NDH6 313 aa16.73■□□□□ 0.27
TPM1-203ENST00000317516 WIPF3A6NGB9 483 aa16.73■□□□□ 0.27
TPM1-203ENST00000317516 ZNF860A6NHJ4 632 aa16.73■□□□□ 0.27
TPM1-203ENST00000317516 CHST10O43529 356 aa16.73■□□□□ 0.27
TPM1-203ENST00000317516 FHP07954 510 aa16.73■□□□□ 0.27
TPM1-203ENST00000317516 GSTA2P09210 222 aa16.73■□□□□ 0.27
TPM1-203ENST00000317516 SSTR1P30872 391 aa16.73■□□□□ 0.27
TPM1-203ENST00000317516 MRPS25P82663 173 aaKnown RBP16.73■□□□□ 0.27
TPM1-203ENST00000317516 REEP5Q00765 189 aa16.73■□□□□ 0.27
TPM1-203ENST00000317516 CAV1Q03135 178 aa16.73■□□□□ 0.27
TPM1-203ENST00000317516 ZNF460Q14592 562 aa16.73■□□□□ 0.27
TPM1-203ENST00000317516 USP10Q14694 798 aaKnown RBP16.73■□□□□ 0.27
TPM1-203ENST00000317516 TSNQ15631 228 aaKnown RBP16.73■□□□□ 0.27
TPM1-203ENST00000317516 C3orf62Q6ZUJ4 267 aa16.73■□□□□ 0.27
TPM1-203ENST00000317516 CEP97Q8IW35 865 aa16.73■□□□□ 0.27
TPM1-203ENST00000317516 TCAIMQ8N3R3 496 aa16.73■□□□□ 0.27
TPM1-203ENST00000317516 TTLQ8NG68 377 aa16.73■□□□□ 0.27
TPM1-203ENST00000317516 OR5T3Q8NGG3 340 aa16.73■□□□□ 0.27
TPM1-203ENST00000317516 ANKRD49Q8WVL7 239 aa16.73■□□□□ 0.27
TPM1-203ENST00000317516 CPNE1Q99829 537 aa16.73■□□□□ 0.27
TPM1-203ENST00000317516 DERL2Q9GZP9 239 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms